RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 FAM237AA0A1B0GTK4 181 aa24.87■■□□□ 1.57
LINC01960-201ENST00000563759 ZBTB48P10074 688 aaPredicted RBP24.87■■□□□ 1.57
LINC01960-201ENST00000563759 LONP1P36776 959 aaKnown RBP24.87■■□□□ 1.57
LINC01960-201ENST00000563759 IL17AQ16552 155 aa24.87■■□□□ 1.57
LINC01960-201ENST00000563759 TKFCQ3LXA3 575 aa24.87■■□□□ 1.57
LINC01960-201ENST00000563759 NSMFQ6X4W1 530 aa24.87■■□□□ 1.57
LINC01960-201ENST00000563759 ZNF202O95125 648 aa24.86■■□□□ 1.57
LINC01960-201ENST00000563759 ZNF445P59923 1031 aa24.86■■□□□ 1.57
LINC01960-201ENST00000563759 RNF207Q6ZRF8 634 aa24.86■■□□□ 1.57
LINC01960-201ENST00000563759 SYMPKQ92797 1274 aaKnown RBP24.86■■□□□ 1.57
LINC01960-201ENST00000563759 PNMA3Q9UL41 463 aa24.86■■□□□ 1.57
LINC01960-201ENST00000563759 CCL15-CCL14A0A0B4J2E2 113 aa24.85■■□□□ 1.57
LINC01960-201ENST00000563759 RPS6P62753 249 aaKnown RBP24.85■■□□□ 1.57
LINC01960-201ENST00000563759 CCL15Q16663 113 aa24.85■■□□□ 1.57
LINC01960-201ENST00000563759 SPRYD7Q5W111 196 aa24.85■■□□□ 1.57
LINC01960-201ENST00000563759 GPAT2Q6NUI2 795 aa24.85■■□□□ 1.57
LINC01960-201ENST00000563759 PAGR1Q9BTK6 254 aa24.85■■□□□ 1.57
LINC01960-201ENST00000563759 ACAD9Q9H845 621 aa24.85■■□□□ 1.57
LINC01960-201ENST00000563759 MARCH6O60337 910 aa24.85■■□□□ 1.57
LINC01960-201ENST00000563759 ZNF76P36508 570 aa24.85■■□□□ 1.57
LINC01960-201ENST00000563759 SLC30A10Q6XR72 485 aa24.85■■□□□ 1.57
LINC01960-201ENST00000563759 USP49Q70CQ1 688 aa24.85■■□□□ 1.57
LINC01960-201ENST00000563759 EPSTI1Q96J88 318 aa24.85■■□□□ 1.57
LINC01960-201ENST00000563759 CYP3A7-CYP3A51PA0A087WV96 503 aa24.84■■□□□ 1.57
LINC01960-201ENST00000563759 CYP3A7P24462 503 aa24.84■■□□□ 1.57
LINC01960-201ENST00000563759 UBXN2AP68543 259 aa24.84■■□□□ 1.57
LINC01960-201ENST00000563759 TMEM266Q2M3C6 531 aa24.84■■□□□ 1.57
LINC01960-201ENST00000563759 MTMR9Q96QG7 549 aa24.84■■□□□ 1.57
LINC01960-201ENST00000563759 BTBD7Q9P203 1132 aa24.84■■□□□ 1.57
LINC01960-201ENST00000563759 COL20A1Q9P218 1284 aa24.84■■□□□ 1.57
LINC01960-201ENST00000563759 LCTP09848 1927 aa24.84■■□□□ 1.57
LINC01960-201ENST00000563759 CYP3A4P08684 503 aa24.83■■□□□ 1.57
LINC01960-201ENST00000563759 TXLNAP40222 546 aa24.83■■□□□ 1.57
LINC01960-201ENST00000563759 TXKP42681 527 aa24.83■■□□□ 1.57
LINC01960-201ENST00000563759 PRR16Q569H4 304 aa24.83■■□□□ 1.57
LINC01960-201ENST00000563759 SYTL5Q8TDW5 730 aaPredicted RBP24.83■■□□□ 1.57
LINC01960-201ENST00000563759 MS4A4AQ96JQ5 239 aa24.83■■□□□ 1.57
LINC01960-201ENST00000563759 SDF4Q9BRK5 362 aa24.83■■□□□ 1.57
LINC01960-201ENST00000563759 CTAGE5O15320 804 aa24.83■■□□□ 1.56
LINC01960-201ENST00000563759 POTEEQ6S8J3 1075 aa24.83■■□□□ 1.56
LINC01960-201ENST00000563759 PDILTQ8N807 584 aa24.83■■□□□ 1.56
LINC01960-201ENST00000563759 RABGAP1Q9Y3P9 1069 aa24.83■■□□□ 1.56
LINC01960-201ENST00000563759 PASKQ96RG2 1323 aa24.83■■□□□ 1.56
LINC01960-201ENST00000563759 CIITAP33076 1130 aa24.82■■□□□ 1.56
LINC01960-201ENST00000563759 MBOAT7Q96N66 472 aa24.82■■□□□ 1.56
LINC01960-201ENST00000563759 SPATC1LQ9H0A9 340 aa24.82■■□□□ 1.56
LINC01960-201ENST00000563759 FAM86B1E9PN63 330 aa24.81■■□□□ 1.56
LINC01960-201ENST00000563759 POLR2DO15514 142 aaKnown RBP24.81■■□□□ 1.56
LINC01960-201ENST00000563759 PEX10O60683 326 aa24.81■■□□□ 1.56
LINC01960-201ENST00000563759 FAM86B2P0C5J1 330 aa24.81■■□□□ 1.56
LINC01960-201ENST00000563759 TECP42680 631 aa24.81■■□□□ 1.56
LINC01960-201ENST00000563759 LRSAM1Q6UWE0 723 aa24.81■■□□□ 1.56
LINC01960-201ENST00000563759 CKAP2LQ8IYA6 745 aa24.81■■□□□ 1.56
LINC01960-201ENST00000563759 SMC1BQ8NDV3 1235 aa24.81■■□□□ 1.56
LINC01960-201ENST00000563759 CHST13Q8NET6 341 aa24.81■■□□□ 1.56
LINC01960-201ENST00000563759 AK8Q96MA6 479 aa24.81■■□□□ 1.56
LINC01960-201ENST00000563759 TIGD1Q96MW7 591 aa24.81■■□□□ 1.56
LINC01960-201ENST00000563759 RAB34Q9BZG1 259 aa24.81■■□□□ 1.56
LINC01960-201ENST00000563759 KIF3CO14782 793 aa24.81■■□□□ 1.56
LINC01960-201ENST00000563759 ZNF157P51786 506 aaPredicted RBP24.81■■□□□ 1.56
LINC01960-201ENST00000563759 BAATQ14032 418 aaPredicted RBP24.81■■□□□ 1.56
LINC01960-201ENST00000563759 Q4G0T1 1027 aa24.81■■□□□ 1.56
LINC01960-201ENST00000563759 RIOX2Q8IUF8 465 aa24.81■■□□□ 1.56
LINC01960-201ENST00000563759 SMCR8Q8TEV9 937 aaPredicted RBP24.81■■□□□ 1.56
LINC01960-201ENST00000563759 BRI3BPQ8WY22 251 aa24.81■■□□□ 1.56
LINC01960-201ENST00000563759 PANK2Q9BZ23 570 aa24.81■■□□□ 1.56
LINC01960-201ENST00000563759 RPTORQ8N122 1335 aa24.81■■□□□ 1.56
LINC01960-201ENST00000563759 BTBD19C9JJ37 291 aa24.8■■□□□ 1.56
LINC01960-201ENST00000563759 PDHXO00330 501 aa24.8■■□□□ 1.56
LINC01960-201ENST00000563759 FXR2P51116 673 aaKnown RBP eCLIP24.8■■□□□ 1.56
LINC01960-201ENST00000563759 SAPCD2Q86UD0 394 aa24.8■■□□□ 1.56
LINC01960-201ENST00000563759 SLFN12Q8IYM2 578 aa24.8■■□□□ 1.56
LINC01960-201ENST00000563759 CNNM3Q8NE01 707 aa24.8■■□□□ 1.56
LINC01960-201ENST00000563759 TTC12Q9H892 705 aaPredicted RBP24.8■■□□□ 1.56
LINC01960-201ENST00000563759 A1CFQ9NQ94 594 aaKnown RBP24.8■■□□□ 1.56
LINC01960-201ENST00000563759 FBXO40Q9UH90 709 aa24.8■■□□□ 1.56
LINC01960-201ENST00000563759 SLC45A1Q9Y2W3 748 aa24.8■■□□□ 1.56
LINC01960-201ENST00000563759 NCAPG2Q86XI2 1143 aa24.79■■□□□ 1.56
LINC01960-201ENST00000563759 RASSF8Q8NHQ8 419 aa24.79■■□□□ 1.56
LINC01960-201ENST00000563759 HAS1Q92839 578 aa24.79■■□□□ 1.56
LINC01960-201ENST00000563759 RMDN3Q96TC7 470 aa24.79■■□□□ 1.56
LINC01960-201ENST00000563759 KCNMB3Q9NPA1 279 aa24.79■■□□□ 1.56
LINC01960-201ENST00000563759 KIAA1217Q5T5P2 1943 aa24.79■■□□□ 1.56
LINC01960-201ENST00000563759 FRMPD4Q14CM0 1322 aa24.79■■□□□ 1.56
LINC01960-201ENST00000563759 CYP2C8P10632 490 aa24.79■■□□□ 1.56
LINC01960-201ENST00000563759 CDC25AP30304 524 aa24.79■■□□□ 1.56
LINC01960-201ENST00000563759 UBA7P41226 1012 aa24.79■■□□□ 1.56
LINC01960-201ENST00000563759 RBM43Q6ZSC3 357 aaKnown RBP24.79■■□□□ 1.56
LINC01960-201ENST00000563759 ANKRD23Q86SG2 305 aa24.79■■□□□ 1.56
LINC01960-201ENST00000563759 RASAL3Q86YV0 1011 aa24.79■■□□□ 1.56
LINC01960-201ENST00000563759 GTF3C2Q8WUA4 911 aaPredicted RBP24.79■■□□□ 1.56
LINC01960-201ENST00000563759 LENG9Q96B70 501 aa24.79■■□□□ 1.56
LINC01960-201ENST00000563759 DHX58Q96C10 678 aa24.79■■□□□ 1.56
LINC01960-201ENST00000563759 TAAR1Q96RJ0 339 aa24.79■■□□□ 1.56
LINC01960-201ENST00000563759 MAF1Q9H063 256 aa24.79■■□□□ 1.56
LINC01960-201ENST00000563759 CYP39A1Q9NYL5 469 aa24.79■■□□□ 1.56
LINC01960-201ENST00000563759 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.78■■□□□ 1.56
LINC01960-201ENST00000563759 PP2D1A8MPX8 630 aa24.78■■□□□ 1.56
LINC01960-201ENST00000563759 CNMDO75829 334 aa24.78■■□□□ 1.56
LINC01960-201ENST00000563759 EIF2AK2P19525 551 aaKnown RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms