RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 HERVK_113Q902F9 699 aa8.09□□□□□ -1.11
CDH11-208ENST00000563492 ANKS1AQ92625 1134 aa8.09□□□□□ -1.11
CDH11-208ENST00000563492 NKX2-4Q9H2Z4 354 aa8.09□□□□□ -1.11
CDH11-208ENST00000563492 KAT14Q9H8E8 782 aa8.09□□□□□ -1.11
CDH11-208ENST00000563492 JMJD4Q9H9V9 463 aa8.09□□□□□ -1.11
CDH11-208ENST00000563492 Q9Y3F1 56 aa8.09□□□□□ -1.11
CDH11-208ENST00000563492 TNKSO95271 1327 aa8.08□□□□□ -1.12
CDH11-208ENST00000563492 A6NJR5 290 aa8.08□□□□□ -1.12
CDH11-208ENST00000563492 DHX16O60231 1041 aaKnown RBP8.08□□□□□ -1.12
CDH11-208ENST00000563492 ZEB2O60315 1214 aa8.08□□□□□ -1.12
CDH11-208ENST00000563492 SORBS3O60504 671 aa8.08□□□□□ -1.12
CDH11-208ENST00000563492 PCP11498 1178 aaKnown RBP8.08□□□□□ -1.12
CDH11-208ENST00000563492 MFAP1P55081 439 aaKnown RBP8.08□□□□□ -1.12
CDH11-208ENST00000563492 COL9A3Q14050 684 aaPredicted RBP8.08□□□□□ -1.12
CDH11-208ENST00000563492 PPP2R5BQ15173 497 aa8.08□□□□□ -1.12
CDH11-208ENST00000563492 SEC23AQ15436 765 aa8.08□□□□□ -1.12
CDH11-208ENST00000563492 GPATCH4Q5T3I0 446 aaKnown RBP8.08□□□□□ -1.12
CDH11-208ENST00000563492 CCDC62Q6P9F0 684 aa8.08□□□□□ -1.12
CDH11-208ENST00000563492 CHST3Q7LGC8 479 aa8.08□□□□□ -1.12
CDH11-208ENST00000563492 DEFB128Q7Z7B8 93 aa8.08□□□□□ -1.12
CDH11-208ENST00000563492 IQCA1Q86XH1 822 aa8.08□□□□□ -1.12
CDH11-208ENST00000563492 AFG1LQ8WV93 481 aa8.08□□□□□ -1.12
CDH11-208ENST00000563492 CTAGE1Q96RT6 745 aa8.08□□□□□ -1.12
CDH11-208ENST00000563492 MTG1Q9BT17 334 aaPredicted RBP8.08□□□□□ -1.12
CDH11-208ENST00000563492 DSCC1Q9BVC3 393 aa8.08□□□□□ -1.12
CDH11-208ENST00000563492 CHD9Q3L8U1 2897 aa8.08□□□□□ -1.12
CDH11-208ENST00000563492 TTC28Q96AY4 2481 aa8.07□□□□□ -1.12
CDH11-208ENST00000563492 RFXAPO00287 272 aa8.07□□□□□ -1.12
CDH11-208ENST00000563492 ARHGEF15O94989 841 aa8.07□□□□□ -1.12
CDH11-208ENST00000563492 PARP1P09874 1014 aaKnown RBP8.07□□□□□ -1.12
CDH11-208ENST00000563492 EIF2AK2P19525 551 aaKnown RBP8.07□□□□□ -1.12
CDH11-208ENST00000563492 CPT1AP50416 773 aa8.07□□□□□ -1.12
CDH11-208ENST00000563492 ARHGAP1Q07960 439 aa8.07□□□□□ -1.12
CDH11-208ENST00000563492 AAMPQ13685 434 aa8.07□□□□□ -1.12
CDH11-208ENST00000563492 CCDC85BQ15834 202 aaPredicted RBP8.07□□□□□ -1.12
CDH11-208ENST00000563492 IMMTQ16891 758 aaKnown RBP8.07□□□□□ -1.12
CDH11-208ENST00000563492 TTC22Q5TAA0 569 aa8.07□□□□□ -1.12
CDH11-208ENST00000563492 PSRC1Q6PGN9 363 aaPredicted RBP8.07□□□□□ -1.12
CDH11-208ENST00000563492 STOX1Q6ZVD7 989 aa8.07□□□□□ -1.12
CDH11-208ENST00000563492 SPRED2Q7Z698 418 aa8.07□□□□□ -1.12
CDH11-208ENST00000563492 FBXO11Q86XK2 927 aa8.07□□□□□ -1.12
CDH11-208ENST00000563492 RGS22Q8NE09 1264 aa8.07□□□□□ -1.12
CDH11-208ENST00000563492 DNERQ8NFT8 737 aa8.07□□□□□ -1.12
CDH11-208ENST00000563492 SCFD2Q8WU76 684 aa8.07□□□□□ -1.12
CDH11-208ENST00000563492 KAT2BQ92831 832 aa8.07□□□□□ -1.12
CDH11-208ENST00000563492 RMDN3Q96TC7 470 aa8.07□□□□□ -1.12
CDH11-208ENST00000563492 BCAS3Q9H6U6 928 aa8.07□□□□□ -1.12
CDH11-208ENST00000563492 GPHNQ9NQX3 736 aaPredicted RBP8.07□□□□□ -1.12
CDH11-208ENST00000563492 POLR3EQ9NVU0 708 aa8.07□□□□□ -1.12
CDH11-208ENST00000563492 LCTP09848 1927 aa8.07□□□□□ -1.12
CDH11-208ENST00000563492 TMEM265A0A087WTH1 108 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 ZBBXA8MT70 800 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 KLRF2D3W0D1 207 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 RGS20O76081 388 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 CFBP00751 764 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 CYP21A2P08686 494 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 CHMLP26374 656 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 HOXA13P31271 388 aaPredicted RBP8.06□□□□□ -1.12
CDH11-208ENST00000563492 HIC1Q14526 733 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 GPNMBQ14956 572 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 TCTN1Q2MV58 587 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 ASPRV1Q53RT3 343 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 IFIT1BQ5T764 474 aaKnown RBP8.06□□□□□ -1.12
CDH11-208ENST00000563492 GDF6Q6KF10 455 aaPredicted RBP8.06□□□□□ -1.12
CDH11-208ENST00000563492 TMCO2Q7Z6W1 182 aaPredicted RBP8.06□□□□□ -1.12
CDH11-208ENST00000563492 SKAP1Q86WV1 359 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 IL31RAQ8NI17 732 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 NSUN6Q8TEA1 469 aaKnown RBP8.06□□□□□ -1.12
CDH11-208ENST00000563492 PIBF1Q8WXW3 757 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 GPKOWQ92917 476 aaPredicted RBP eCLIP8.06□□□□□ -1.12
CDH11-208ENST00000563492 UBAC1Q9BSL1 405 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 KRT23Q9C075 422 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 CERS4Q9HA82 394 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 MAD2L2Q9UI95 211 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 MSRAQ9UJ68 235 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 DDX41Q9UJV9 622 aaKnown RBP8.06□□□□□ -1.12
CDH11-208ENST00000563492 TELO2Q9Y4R8 837 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 SLC4A7Q9Y6M7 1214 aa8.06□□□□□ -1.12
CDH11-208ENST00000563492 ABCB11O95342 1321 aa8.05□□□□□ -1.12
CDH11-208ENST00000563492 LOC102724159A0A0B4J2E5 919 aa8.05□□□□□ -1.12
CDH11-208ENST00000563492 PALM3A6NDB9 673 aaPredicted RBP8.05□□□□□ -1.12
CDH11-208ENST00000563492 HIP1O00291 1037 aa8.05□□□□□ -1.12
CDH11-208ENST00000563492 CYTH3O43739 400 aa8.05□□□□□ -1.12
CDH11-208ENST00000563492 NR3C2P08235 984 aa8.05□□□□□ -1.12
CDH11-208ENST00000563492 MMP3P08254 477 aa8.05□□□□□ -1.12
CDH11-208ENST00000563492 IQCF3P0C7M6 154 aa8.05□□□□□ -1.12
CDH11-208ENST00000563492 MYCLP12524 364 aaPredicted RBP8.05□□□□□ -1.12
CDH11-208ENST00000563492 ATP2A2P16615 1042 aaKnown RBP8.05□□□□□ -1.12
CDH11-208ENST00000563492 IGFBP4P22692 258 aa8.05□□□□□ -1.12
CDH11-208ENST00000563492 HSD17B4P51659 736 aa8.05□□□□□ -1.12
CDH11-208ENST00000563492 ANTXR2P58335 489 aa8.05□□□□□ -1.12
CDH11-208ENST00000563492 ZNF200P98182 395 aaPredicted RBP8.05□□□□□ -1.12
CDH11-208ENST00000563492 SP2Q02086 613 aa8.05□□□□□ -1.12
CDH11-208ENST00000563492 PWP2Q15269 919 aaKnown RBP8.05□□□□□ -1.12
CDH11-208ENST00000563492 STXBP2Q15833 593 aa8.05□□□□□ -1.12
CDH11-208ENST00000563492 PTGISQ16647 500 aa8.05□□□□□ -1.12
CDH11-208ENST00000563492 CCDC178Q5BJE1 867 aa8.05□□□□□ -1.12
CDH11-208ENST00000563492 ARHGEF16Q5VV41 709 aa8.05□□□□□ -1.12
CDH11-208ENST00000563492 KRT40Q6A162 431 aa8.05□□□□□ -1.12
CDH11-208ENST00000563492 HOMER1Q86YM7 354 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms