RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 EEPD1Q7L9B9 569 aa9.87□□□□□ -0.83
UBR1-204ENST00000563239 FBXO16Q8IX29 292 aaPredicted RBP9.87□□□□□ -0.83
UBR1-204ENST00000563239 SAMD3Q8N6K7 520 aa9.87□□□□□ -0.83
UBR1-204ENST00000563239 GPKOWQ92917 476 aaPredicted RBP eCLIP9.87□□□□□ -0.83
UBR1-204ENST00000563239 PAWRQ96IZ0 340 aaKnown RBP9.87□□□□□ -0.83
UBR1-204ENST00000563239 RMDN3Q96TC7 470 aa9.87□□□□□ -0.83
UBR1-204ENST00000563239 PXMP2Q9NR77 195 aa9.87□□□□□ -0.83
UBR1-204ENST00000563239 MAP3K20Q9NYL2 800 aaKnown RBP9.87□□□□□ -0.83
UBR1-204ENST00000563239 SEC63Q9UGP8 760 aaKnown RBP9.87□□□□□ -0.83
UBR1-204ENST00000563239 FAM184BQ9ULE4 1060 aa9.87□□□□□ -0.83
UBR1-204ENST00000563239 TPCN1Q9ULQ1 816 aa9.87□□□□□ -0.83
UBR1-204ENST00000563239 NAP1L2Q9ULW6 460 aaPredicted RBP9.87□□□□□ -0.83
UBR1-204ENST00000563239 FRMPD4Q14CM0 1322 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 CCDC196A0A1B0GTZ2 297 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 MYADML2A6NDP7 307 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 GCOM1H8Y6P7 765 aaPredicted RBP9.86□□□□□ -0.83
UBR1-204ENST00000563239 STXBP3O00186 592 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 PIK3CDO00329 1044 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 ADAMTS3O15072 1205 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 PRPF3O43395 683 aaKnown RBP9.86□□□□□ -0.83
UBR1-204ENST00000563239 PPFIA3O75145 1194 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 DUSP11O75319 330 aaKnown RBP9.86□□□□□ -0.83
UBR1-204ENST00000563239 PGK1P00558 417 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 POLR2MP0CAP2 368 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 IFNAR1P17181 557 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 SMPD1P17405 629 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 RBM25P49756 843 aaKnown RBP9.86□□□□□ -0.83
UBR1-204ENST00000563239 NKX3-2P78367 333 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 LRRC41Q15345 812 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 GJC2Q5T442 439 aaPredicted RBP9.86□□□□□ -0.83
UBR1-204ENST00000563239 CCSAPQ6IQ19 270 aaPredicted RBP9.86□□□□□ -0.83
UBR1-204ENST00000563239 USP17L6PQ6QN14 398 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 KLHDC9Q8NEP7 349 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 IL31RAQ8NI17 732 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 NSUN6Q8TEA1 469 aaKnown RBP9.86□□□□□ -0.83
UBR1-204ENST00000563239 PHKBQ93100 1093 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 C22orf23Q9BZE7 217 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 UPF3AQ9H1J1 476 aaKnown RBP9.86□□□□□ -0.83
UBR1-204ENST00000563239 VTA1Q9NP79 307 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 XPNPEP3Q9NQH7 507 aa9.86□□□□□ -0.83
UBR1-204ENST00000563239 GNEQ9Y223 722 aaKnown RBP9.86□□□□□ -0.83
UBR1-204ENST00000563239 SYNRGQ9UMZ2 1314 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 DNM1LO00429 736 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 PFKFB2O60825 505 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 RGS20O76081 388 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 ARIH2O95376 493 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 LARGE1O95461 756 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 NR3C2P08235 984 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 RARBP10826 455 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 EIF2AK2P19525 551 aaKnown RBP9.85□□□□□ -0.83
UBR1-204ENST00000563239 NEK4P51957 841 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 GJA9P57773 515 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 TNFAIP2Q03169 654 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 PDE4DQ08499 809 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 SCRN1Q12765 414 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 STK3Q13188 491 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 UBE2SQ16763 222 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 PFKFB3Q16875 520 aaPredicted RBP9.85□□□□□ -0.83
UBR1-204ENST00000563239 ARHGEF16Q5VV41 709 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 IQSEC1Q6DN90 963 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 HEATR3Q7Z4Q2 680 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 NECAB2Q7Z6G3 386 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 VSIG10LQ86VR7 867 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 IWS1Q96ST2 819 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 PDCD2LQ9BRP1 358 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 PSTPIP2Q9H939 334 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 BARHL2Q9NY43 387 aa9.85□□□□□ -0.83
UBR1-204ENST00000563239 DTNBO60941 627 aa9.84□□□□□ -0.83
UBR1-204ENST00000563239 CTDNEP1O95476 244 aa9.84□□□□□ -0.83
UBR1-204ENST00000563239 SCG2P13521 617 aa9.84□□□□□ -0.83
UBR1-204ENST00000563239 MRPS9P82933 396 aaKnown RBP9.84□□□□□ -0.83
UBR1-204ENST00000563239 ST3GAL1Q11201 340 aa9.84□□□□□ -0.83
UBR1-204ENST00000563239 PGM5Q15124 567 aa9.84□□□□□ -0.83
UBR1-204ENST00000563239 ME3Q16798 604 aa9.84□□□□□ -0.83
UBR1-204ENST00000563239 DUSP28Q4G0W2 176 aa9.84□□□□□ -0.83
UBR1-204ENST00000563239 PPP1R18Q6NYC8 613 aa9.84□□□□□ -0.83
UBR1-204ENST00000563239 CCDC62Q6P9F0 684 aa9.84□□□□□ -0.83
UBR1-204ENST00000563239 FCHSD1Q86WN1 690 aa9.84□□□□□ -0.83
UBR1-204ENST00000563239 ARRDC4Q8NCT1 418 aa9.84□□□□□ -0.83
UBR1-204ENST00000563239 ZFP91Q96JP5 570 aaPredicted RBP9.84□□□□□ -0.83
UBR1-204ENST00000563239 SLC26A6Q9BXS9 759 aa9.84□□□□□ -0.83
UBR1-204ENST00000563239 RNF26Q9BY78 433 aaPredicted RBP9.84□□□□□ -0.83
UBR1-204ENST00000563239 WDR11Q9BZH6 1224 aa9.84□□□□□ -0.83
UBR1-204ENST00000563239 C11orf49Q9H6J7 331 aa9.84□□□□□ -0.83
UBR1-204ENST00000563239 hCG_1984214I3L0E3 225 aa9.83□□□□□ -0.84
UBR1-204ENST00000563239 EIF3JO75822 258 aaKnown RBP9.83□□□□□ -0.84
UBR1-204ENST00000563239 CST5P28325 142 aaPredicted RBP9.83□□□□□ -0.84
UBR1-204ENST00000563239 CLK2P49760 499 aaKnown RBP9.83□□□□□ -0.84
UBR1-204ENST00000563239 NAPAP54920 295 aa9.83□□□□□ -0.84
UBR1-204ENST00000563239 C1QBPQ07021 282 aaKnown RBP9.83□□□□□ -0.84
UBR1-204ENST00000563239 ANKRD1Q15327 319 aa9.83□□□□□ -0.84
UBR1-204ENST00000563239 STXBP2Q15833 593 aa9.83□□□□□ -0.84
UBR1-204ENST00000563239 ZNF713Q8N859 430 aaPredicted RBP9.83□□□□□ -0.84
UBR1-204ENST00000563239 NECAB1Q8N987 351 aa9.83□□□□□ -0.84
UBR1-204ENST00000563239 COPS5Q92905 334 aa9.83□□□□□ -0.84
UBR1-204ENST00000563239 BACH2Q9BYV9 841 aa9.83□□□□□ -0.84
UBR1-204ENST00000563239 RIC8AQ9NPQ8 531 aa9.83□□□□□ -0.84
UBR1-204ENST00000563239 PHF24Q9UPV7 400 aa9.83□□□□□ -0.84
UBR1-204ENST00000563239 Q9Y3F1 56 aa9.83□□□□□ -0.84
UBR1-204ENST00000563239 ALPK3Q96L96 1907 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms