RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 WTAPQ15007 396 aa18.32■□□□□ 0.52
SF3B3-203ENST00000562874 ZNF697Q5TEC3 545 aa18.32■□□□□ 0.52
SF3B3-203ENST00000562874 SCFD2Q8WU76 684 aa18.32■□□□□ 0.52
SF3B3-203ENST00000562874 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.32■□□□□ 0.52
SF3B3-203ENST00000562874 TRPV6Q9H1D0 765 aa18.32■□□□□ 0.52
SF3B3-203ENST00000562874 CDH23Q9H251 3354 aa18.31■□□□□ 0.52
SF3B3-203ENST00000562874 ERICH2A1L162 156 aa18.31■□□□□ 0.52
SF3B3-203ENST00000562874 PALM3A6NDB9 673 aaPredicted RBP18.31■□□□□ 0.52
SF3B3-203ENST00000562874 CSF2RAP15509 400 aa18.31■□□□□ 0.52
SF3B3-203ENST00000562874 COL9A3Q14050 684 aaPredicted RBP18.31■□□□□ 0.52
SF3B3-203ENST00000562874 TMEM67Q5HYA8 995 aa18.31■□□□□ 0.52
SF3B3-203ENST00000562874 MFSD5Q6N075 450 aa18.31■□□□□ 0.52
SF3B3-203ENST00000562874 SEPT14Q6ZU15 432 aa18.31■□□□□ 0.52
SF3B3-203ENST00000562874 MB21D2Q8IYB1 491 aaPredicted RBP18.31■□□□□ 0.52
SF3B3-203ENST00000562874 SLC43A3Q8NBI5 491 aa18.31■□□□□ 0.52
SF3B3-203ENST00000562874 PIBF1Q8WXW3 757 aa18.31■□□□□ 0.52
SF3B3-203ENST00000562874 MAP4K1Q92918 833 aa18.31■□□□□ 0.52
SF3B3-203ENST00000562874 MYL10Q9BUA6 226 aa18.31■□□□□ 0.52
SF3B3-203ENST00000562874 AMNQ9BXJ7 453 aa18.31■□□□□ 0.52
SF3B3-203ENST00000562874 GPHNQ9NQX3 736 aaPredicted RBP18.31■□□□□ 0.52
SF3B3-203ENST00000562874 MRPL11Q9Y3B7 192 aaKnown RBP18.31■□□□□ 0.52
SF3B3-203ENST00000562874 KAT6AQ92794 2004 aa18.31■□□□□ 0.52
SF3B3-203ENST00000562874 TXNP10599 105 aaKnown RBP18.3■□□□□ 0.52
SF3B3-203ENST00000562874 CPT1AP50416 773 aa18.3■□□□□ 0.52
SF3B3-203ENST00000562874 PURAQ00577 322 aaKnown RBP18.3■□□□□ 0.52
SF3B3-203ENST00000562874 MCF2L2Q86YR7 1114 aa18.3■□□□□ 0.52
SF3B3-203ENST00000562874 RGS22Q8NE09 1264 aa18.3■□□□□ 0.52
SF3B3-203ENST00000562874 PIGSQ96S52 555 aa18.3■□□□□ 0.52
SF3B3-203ENST00000562874 RMDN3Q96TC7 470 aa18.3■□□□□ 0.52
SF3B3-203ENST00000562874 HIPK3Q9H422 1215 aa18.3■□□□□ 0.52
SF3B3-203ENST00000562874 POLR3EQ9NVU0 708 aa18.3■□□□□ 0.52
SF3B3-203ENST00000562874 ZBTB5O15062 677 aa18.29■□□□□ 0.52
SF3B3-203ENST00000562874 CYTH3O43739 400 aa18.29■□□□□ 0.52
SF3B3-203ENST00000562874 HOXA13P31271 388 aaPredicted RBP18.29■□□□□ 0.52
SF3B3-203ENST00000562874 CCL23P55773 120 aa18.29■□□□□ 0.52
SF3B3-203ENST00000562874 CHMP4BP1P59074 171 aa18.29■□□□□ 0.52
SF3B3-203ENST00000562874 PPIGQ13427 754 aaKnown RBP eCLIP18.29■□□□□ 0.52
SF3B3-203ENST00000562874 TTLL4Q14679 1199 aa18.29■□□□□ 0.52
SF3B3-203ENST00000562874 FAM47CQ5HY64 1035 aa18.29■□□□□ 0.52
SF3B3-203ENST00000562874 ARHGEF16Q5VV41 709 aa18.29■□□□□ 0.52
SF3B3-203ENST00000562874 FAM109BQ6ICB4 259 aaPredicted RBP18.29■□□□□ 0.52
SF3B3-203ENST00000562874 MTMR8Q96EF0 704 aa18.29■□□□□ 0.52
SF3B3-203ENST00000562874 ESYT1Q9BSJ8 1104 aa18.29■□□□□ 0.52
SF3B3-203ENST00000562874 LSG1Q9H089 658 aaKnown RBP18.29■□□□□ 0.52
SF3B3-203ENST00000562874 TRMT13Q9NUP7 481 aaKnown RBP18.29■□□□□ 0.52
SF3B3-203ENST00000562874 STXBP5LQ9Y2K9 1186 aa18.29■□□□□ 0.52
SF3B3-203ENST00000562874 B4DLN1 442 aa18.28■□□□□ 0.52
SF3B3-203ENST00000562874 MRPL12P52815 198 aaKnown RBP18.28■□□□□ 0.52
SF3B3-203ENST00000562874 TROAPQ12815 778 aa18.28■□□□□ 0.52
SF3B3-203ENST00000562874 SART3Q15020 963 aaKnown RBP18.28■□□□□ 0.52
SF3B3-203ENST00000562874 LY6KQ17RY6 165 aa18.28■□□□□ 0.52
SF3B3-203ENST00000562874 C16orf59Q7L2K0 433 aa18.28■□□□□ 0.52
SF3B3-203ENST00000562874 TMEM199Q8N511 208 aa18.28■□□□□ 0.52
SF3B3-203ENST00000562874 NSUN6Q8TEA1 469 aaKnown RBP18.28■□□□□ 0.52
SF3B3-203ENST00000562874 MTG1Q9BT17 334 aaPredicted RBP18.28■□□□□ 0.52
SF3B3-203ENST00000562874 NOC4LQ9BVI4 516 aaKnown RBP18.28■□□□□ 0.52
SF3B3-203ENST00000562874 WNT8AQ9H1J5 351 aa18.28■□□□□ 0.52
SF3B3-203ENST00000562874 TTYH1Q9H313 450 aaPredicted RBP18.28■□□□□ 0.52
SF3B3-203ENST00000562874 PXMP2Q9NR77 195 aa18.28■□□□□ 0.52
SF3B3-203ENST00000562874 PCDHA1Q9Y5I3 950 aa18.28■□□□□ 0.52
SF3B3-203ENST00000562874 NKRFO15226 690 aaKnown RBP eCLIP18.27■□□□□ 0.52
SF3B3-203ENST00000562874 SORBS3O60504 671 aa18.27■□□□□ 0.52
SF3B3-203ENST00000562874 CYP2C9P11712 490 aa18.27■□□□□ 0.52
SF3B3-203ENST00000562874 HSD17B4P51659 736 aa18.27■□□□□ 0.52
SF3B3-203ENST00000562874 SMAD3P84022 425 aaKnown RBP18.27■□□□□ 0.52
SF3B3-203ENST00000562874 TMEM240Q5SV17 173 aa18.27■□□□□ 0.52
SF3B3-203ENST00000562874 RAB11FIP4Q86YS3 637 aa18.27■□□□□ 0.52
SF3B3-203ENST00000562874 ZNF654Q8IZM8 581 aa18.27■□□□□ 0.52
SF3B3-203ENST00000562874 IL31RAQ8NI17 732 aa18.27■□□□□ 0.52
SF3B3-203ENST00000562874 SCLYQ96I15 445 aa18.27■□□□□ 0.52
SF3B3-203ENST00000562874 ZFP91Q96JP5 570 aaPredicted RBP18.27■□□□□ 0.52
SF3B3-203ENST00000562874 ALDH8A1Q9H2A2 487 aaPredicted RBP18.27■□□□□ 0.52
SF3B3-203ENST00000562874 LY9Q9HBG7 655 aa18.27■□□□□ 0.52
SF3B3-203ENST00000562874 ANO2Q9NQ90 1003 aa18.27■□□□□ 0.52
SF3B3-203ENST00000562874 SLC27A2O14975 620 aa18.26■□□□□ 0.51
SF3B3-203ENST00000562874 PRC1O43663 620 aa18.26■□□□□ 0.51
SF3B3-203ENST00000562874 MMP3P08254 477 aa18.26■□□□□ 0.51
SF3B3-203ENST00000562874 MYCLP12524 364 aaPredicted RBP18.26■□□□□ 0.51
SF3B3-203ENST00000562874 RXRAP19793 462 aa18.26■□□□□ 0.51
SF3B3-203ENST00000562874 ARHGAP1Q07960 439 aa18.26■□□□□ 0.51
SF3B3-203ENST00000562874 STXBP2Q15833 593 aa18.26■□□□□ 0.51
SF3B3-203ENST00000562874 NBPF20Q3BBV1 942 aa18.26■□□□□ 0.51
SF3B3-203ENST00000562874 CCDC62Q6P9F0 684 aa18.26■□□□□ 0.51
SF3B3-203ENST00000562874 ZNF365Q70YC5 407 aa18.26■□□□□ 0.51
SF3B3-203ENST00000562874 CATIPQ7Z7H3 387 aa18.26■□□□□ 0.51
SF3B3-203ENST00000562874 IGDCC4Q8TDY8 1250 aa18.26■□□□□ 0.51
SF3B3-203ENST00000562874 AFG1LQ8WV93 481 aa18.26■□□□□ 0.51
SF3B3-203ENST00000562874 RIOX1Q9H6W3 641 aa18.26■□□□□ 0.51
SF3B3-203ENST00000562874 EYSQ5T1H1 3165 aa18.26■□□□□ 0.51
SF3B3-203ENST00000562874 SIP14410 1827 aa18.26■□□□□ 0.51
SF3B3-203ENST00000562874 COL4A4P53420 1690 aaPredicted RBP18.25■□□□□ 0.51
SF3B3-203ENST00000562874 MICAL3Q7RTP6 2002 aa18.25■□□□□ 0.51
SF3B3-203ENST00000562874 A6NJR5 290 aa18.25■□□□□ 0.51
SF3B3-203ENST00000562874 GRXCR1A8MXD5 290 aa18.25■□□□□ 0.51
SF3B3-203ENST00000562874 GH1P01241 217 aa18.25■□□□□ 0.51
SF3B3-203ENST00000562874 NR3C2P08235 984 aa18.25■□□□□ 0.51
SF3B3-203ENST00000562874 BRDTQ58F21 947 aaPredicted RBP18.25■□□□□ 0.51
SF3B3-203ENST00000562874 PSRC1Q6PGN9 363 aaPredicted RBP18.25■□□□□ 0.51
SF3B3-203ENST00000562874 CASC1Q6TDU7 716 aa18.25■□□□□ 0.51
SF3B3-203ENST00000562874 CENPQQ7L2Z9 268 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms