RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 RMDN3Q96TC7 470 aa19.54■□□□□ 0.72
TNRC6A-209ENST00000562829 AMNQ9BXJ7 453 aa19.54■□□□□ 0.72
TNRC6A-209ENST00000562829 COL20A1Q9P218 1284 aa19.54■□□□□ 0.72
TNRC6A-209ENST00000562829 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.53■□□□□ 0.72
TNRC6A-209ENST00000562829 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.53■□□□□ 0.72
TNRC6A-209ENST00000562829 E7EWF7 191 aa19.53■□□□□ 0.72
TNRC6A-209ENST00000562829 WTAPQ15007 396 aa19.53■□□□□ 0.72
TNRC6A-209ENST00000562829 TMEM240Q5SV17 173 aa19.53■□□□□ 0.72
TNRC6A-209ENST00000562829 ARHGEF16Q5VV41 709 aa19.53■□□□□ 0.72
TNRC6A-209ENST00000562829 SEPT14Q6ZU15 432 aa19.53■□□□□ 0.72
TNRC6A-209ENST00000562829 HOMER1Q86YM7 354 aa19.53■□□□□ 0.72
TNRC6A-209ENST00000562829 MTG1Q9BT17 334 aaPredicted RBP19.53■□□□□ 0.72
TNRC6A-209ENST00000562829 MAF1Q9H063 256 aa19.53■□□□□ 0.72
TNRC6A-209ENST00000562829 SEMA6BQ9H3T3 888 aa19.53■□□□□ 0.72
TNRC6A-209ENST00000562829 MAD2L2Q9UI95 211 aa19.53■□□□□ 0.72
TNRC6A-209ENST00000562829 COL6A3P12111 3177 aa19.52■□□□□ 0.72
TNRC6A-209ENST00000562829 UMODL1Q5DID0 1318 aa19.52■□□□□ 0.72
TNRC6A-209ENST00000562829 ARIH2O95376 493 aa19.52■□□□□ 0.72
TNRC6A-209ENST00000562829 EIF2AK2P19525 551 aaKnown RBP19.52■□□□□ 0.72
TNRC6A-209ENST00000562829 CCL23P55773 120 aa19.52■□□□□ 0.72
TNRC6A-209ENST00000562829 CHMP4BP1P59074 171 aa19.52■□□□□ 0.72
TNRC6A-209ENST00000562829 STXBP2Q15833 593 aa19.52■□□□□ 0.72
TNRC6A-209ENST00000562829 ZNF365Q70YC5 407 aa19.52■□□□□ 0.72
TNRC6A-209ENST00000562829 C16orf59Q7L2K0 433 aa19.52■□□□□ 0.72
TNRC6A-209ENST00000562829 CHST3Q7LGC8 479 aa19.52■□□□□ 0.72
TNRC6A-209ENST00000562829 CDX2Q99626 313 aaPredicted RBP19.52■□□□□ 0.72
TNRC6A-209ENST00000562829 NOC4LQ9BVI4 516 aaKnown RBP19.52■□□□□ 0.72
TNRC6A-209ENST00000562829 ALDH8A1Q9H2A2 487 aaPredicted RBP19.52■□□□□ 0.72
TNRC6A-209ENST00000562829 TTYH1Q9H313 450 aaPredicted RBP19.52■□□□□ 0.72
TNRC6A-209ENST00000562829 IL23AQ9NPF7 189 aa19.52■□□□□ 0.72
TNRC6A-209ENST00000562829 TAF6LQ9Y6J9 622 aa19.52■□□□□ 0.72
TNRC6A-209ENST00000562829 LAMA2P24043 3122 aaKnown RBP19.51■□□□□ 0.71
TNRC6A-209ENST00000562829 PALM3A6NDB9 673 aaPredicted RBP19.51■□□□□ 0.71
TNRC6A-209ENST00000562829 ZBTB5O15062 677 aa19.51■□□□□ 0.71
TNRC6A-209ENST00000562829 DNAJB2P25686 324 aa19.51■□□□□ 0.71
TNRC6A-209ENST00000562829 GRM4Q14833 912 aa19.51■□□□□ 0.71
TNRC6A-209ENST00000562829 IWS1Q96ST2 819 aa19.51■□□□□ 0.71
TNRC6A-209ENST00000562829 TRMT13Q9NUP7 481 aaKnown RBP19.51■□□□□ 0.71
TNRC6A-209ENST00000562829 RBM8AQ9Y5S9 174 aaKnown RBP19.51■□□□□ 0.71
TNRC6A-209ENST00000562829 A6NJR5 290 aa19.5■□□□□ 0.71
TNRC6A-209ENST00000562829 KPNA6O60684 536 aa19.5■□□□□ 0.71
TNRC6A-209ENST00000562829 SUPT20HL2P0C7V6 817 aa19.5■□□□□ 0.71
TNRC6A-209ENST00000562829 LY6KQ17RY6 165 aa19.5■□□□□ 0.71
TNRC6A-209ENST00000562829 TMEM67Q5HYA8 995 aa19.5■□□□□ 0.71
TNRC6A-209ENST00000562829 STOX1Q6ZVD7 989 aa19.5■□□□□ 0.71
TNRC6A-209ENST00000562829 PPP1R13LQ8WUF5 828 aa19.5■□□□□ 0.71
TNRC6A-209ENST00000562829 MYLIPQ8WY64 445 aa19.5■□□□□ 0.71
TNRC6A-209ENST00000562829 MTIF3Q9H2K0 278 aaKnown RBP19.5■□□□□ 0.71
TNRC6A-209ENST00000562829 SENP2Q9HC62 589 aa19.5■□□□□ 0.71
TNRC6A-209ENST00000562829 PCDHA1Q9Y5I3 950 aa19.5■□□□□ 0.71
TNRC6A-209ENST00000562829 TMEM265A0A087WTH1 108 aa19.49■□□□□ 0.71
TNRC6A-209ENST00000562829 PPP1R11O60927 126 aaPredicted RBP19.49■□□□□ 0.71
TNRC6A-209ENST00000562829 GH1P01241 217 aa19.49■□□□□ 0.71
TNRC6A-209ENST00000562829 CYP2C9P11712 490 aa19.49■□□□□ 0.71
TNRC6A-209ENST00000562829 NBPF20Q3BBV1 942 aa19.49■□□□□ 0.71
TNRC6A-209ENST00000562829 CCDC62Q6P9F0 684 aa19.49■□□□□ 0.71
TNRC6A-209ENST00000562829 CATIPQ7Z7H3 387 aa19.49■□□□□ 0.71
TNRC6A-209ENST00000562829 MAP4K1Q92918 833 aa19.49■□□□□ 0.71
TNRC6A-209ENST00000562829 MTMR8Q96EF0 704 aa19.49■□□□□ 0.71
TNRC6A-209ENST00000562829 PIGSQ96S52 555 aa19.49■□□□□ 0.71
TNRC6A-209ENST00000562829 WNT8AQ9H1J5 351 aa19.49■□□□□ 0.71
TNRC6A-209ENST00000562829 PXMP2Q9NR77 195 aa19.49■□□□□ 0.71
TNRC6A-209ENST00000562829 SCN10AQ9Y5Y9 1956 aa19.49■□□□□ 0.71
TNRC6A-209ENST00000562829 KIAA1217Q5T5P2 1943 aa19.49■□□□□ 0.71
TNRC6A-209ENST00000562829 FGBP02675 491 aa19.48■□□□□ 0.71
TNRC6A-209ENST00000562829 NR3C2P08235 984 aa19.48■□□□□ 0.71
TNRC6A-209ENST00000562829 HSD17B4P51659 736 aa19.48■□□□□ 0.71
TNRC6A-209ENST00000562829 TRAF1Q13077 416 aa19.48■□□□□ 0.71
TNRC6A-209ENST00000562829 AFG1LQ8WV93 481 aa19.48■□□□□ 0.71
TNRC6A-209ENST00000562829 TIFAQ96CG3 184 aa19.48■□□□□ 0.71
TNRC6A-209ENST00000562829 SCLYQ96I15 445 aa19.48■□□□□ 0.71
TNRC6A-209ENST00000562829 NOD1Q9Y239 953 aa19.48■□□□□ 0.71
TNRC6A-209ENST00000562829 MRVI1Q9Y6F6 885 aa19.48■□□□□ 0.71
TNRC6A-209ENST00000562829 BAZ2BQ9UIF8 2168 aaKnown RBP19.48■□□□□ 0.71
TNRC6A-209ENST00000562829 GRXCR1A8MXD5 290 aa19.47■□□□□ 0.71
TNRC6A-209ENST00000562829 OPLAHO14841 1288 aa19.47■□□□□ 0.71
TNRC6A-209ENST00000562829 EIF3JO75822 258 aaKnown RBP19.47■□□□□ 0.71
TNRC6A-209ENST00000562829 MYCLP12524 364 aaPredicted RBP19.47■□□□□ 0.71
TNRC6A-209ENST00000562829 FOSL2P15408 326 aa19.47■□□□□ 0.71
TNRC6A-209ENST00000562829 HOXA13P31271 388 aaPredicted RBP19.47■□□□□ 0.71
TNRC6A-209ENST00000562829 CASC1Q6TDU7 716 aa19.47■□□□□ 0.71
TNRC6A-209ENST00000562829 OTOP2Q7RTS6 562 aa19.47■□□□□ 0.71
TNRC6A-209ENST00000562829 MB21D2Q8IYB1 491 aaPredicted RBP19.47■□□□□ 0.71
TNRC6A-209ENST00000562829 RPUSD2Q8IZ73 545 aaKnown RBP19.47■□□□□ 0.71
TNRC6A-209ENST00000562829 PIBF1Q8WXW3 757 aa19.47■□□□□ 0.71
TNRC6A-209ENST00000562829 HERVK_113Q902F9 699 aa19.47■□□□□ 0.71
TNRC6A-209ENST00000562829 RIOX1Q9H6W3 641 aa19.47■□□□□ 0.71
TNRC6A-209ENST00000562829 DLL1O00548 723 aa19.46■□□□□ 0.71
TNRC6A-209ENST00000562829 MMP3P08254 477 aa19.46■□□□□ 0.71
TNRC6A-209ENST00000562829 ANTXR2P58335 489 aa19.46■□□□□ 0.71
TNRC6A-209ENST00000562829 ARHGAP1Q07960 439 aa19.46■□□□□ 0.71
TNRC6A-209ENST00000562829 TROAPQ12815 778 aa19.46■□□□□ 0.71
TNRC6A-209ENST00000562829 SLC35G1Q2M3R5 365 aa19.46■□□□□ 0.71
TNRC6A-209ENST00000562829 RASIP1Q5U651 963 aa19.46■□□□□ 0.71
TNRC6A-209ENST00000562829 NFRKBQ6P4R8 1299 aa19.46■□□□□ 0.71
TNRC6A-209ENST00000562829 MAFAQ8NHW3 353 aaPredicted RBP19.46■□□□□ 0.71
TNRC6A-209ENST00000562829 PDCD2LQ9BRP1 358 aa19.46■□□□□ 0.71
TNRC6A-209ENST00000562829 PBX4Q9BYU1 374 aa19.46■□□□□ 0.71
TNRC6A-209ENST00000562829 MAP3K20Q9NYL2 800 aaKnown RBP19.46■□□□□ 0.71
TNRC6A-209ENST00000562829 ZBBXA8MT70 800 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms