RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 PPP1R13LQ8WUF5 828 aa12.88□□□□□ -0.35
LPCAT4-202ENST00000562404 ZFP91Q96JP5 570 aaPredicted RBP12.88□□□□□ -0.35
LPCAT4-202ENST00000562404 TMEM87BQ96K49 555 aa12.88□□□□□ -0.35
LPCAT4-202ENST00000562404 GLT1D1Q96MS3 346 aa12.88□□□□□ -0.35
LPCAT4-202ENST00000562404 RMDN3Q96TC7 470 aa12.88□□□□□ -0.35
LPCAT4-202ENST00000562404 MTA3Q9BTC8 594 aa12.88□□□□□ -0.35
LPCAT4-202ENST00000562404 SPC25Q9HBM1 224 aa12.88□□□□□ -0.35
LPCAT4-202ENST00000562404 Q9Y3F1 56 aa12.88□□□□□ -0.35
LPCAT4-202ENST00000562404 PNMA6FA0A0J9YX94 578 aa12.87□□□□□ -0.35
LPCAT4-202ENST00000562404 hCG_1642624A0A1W2PR95 340 aa12.87□□□□□ -0.35
LPCAT4-202ENST00000562404 KIAA0355O15063 1070 aa12.87□□□□□ -0.35
LPCAT4-202ENST00000562404 DDAH1O94760 285 aa12.87□□□□□ -0.35
LPCAT4-202ENST00000562404 LIFRP42702 1097 aa12.87□□□□□ -0.35
LPCAT4-202ENST00000562404 EPHB4P54760 987 aa12.87□□□□□ -0.35
LPCAT4-202ENST00000562404 PSMC6P62333 389 aa12.87□□□□□ -0.35
LPCAT4-202ENST00000562404 TSGA10IPQ3SY00 556 aa12.87□□□□□ -0.35
LPCAT4-202ENST00000562404 CCDC62Q6P9F0 684 aa12.87□□□□□ -0.35
LPCAT4-202ENST00000562404 MCF2L2Q86YR7 1114 aa12.87□□□□□ -0.35
LPCAT4-202ENST00000562404 SLC43A3Q8NBI5 491 aa12.87□□□□□ -0.35
LPCAT4-202ENST00000562404 NEK1Q96PY6 1258 aa12.87□□□□□ -0.35
LPCAT4-202ENST00000562404 MAP3K14Q99558 947 aa12.87□□□□□ -0.35
LPCAT4-202ENST00000562404 SPZ1Q9BXG8 430 aa12.87□□□□□ -0.35
LPCAT4-202ENST00000562404 AP5M1Q9H0R1 490 aa12.87□□□□□ -0.35
LPCAT4-202ENST00000562404 PXMP2Q9NR77 195 aa12.87□□□□□ -0.35
LPCAT4-202ENST00000562404 BRPF3Q9ULD4 1205 aa12.87□□□□□ -0.35
LPCAT4-202ENST00000562404 A0A0U1RQG5 324 aaPredicted RBP12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 CCDC69A6NI79 296 aa12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 ARVCFO00192 962 aa12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 RGS20O76081 388 aa12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 LY6KQ17RY6 165 aa12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 C9orf50Q5SZB4 431 aa12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 NFXL1Q6ZNB6 911 aa12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 SEPT14Q6ZU15 432 aa12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 SGMS1Q86VZ5 419 aa12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 FAM126BQ8IXS8 530 aa12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 OR6J1Q8NGC5 347 aa12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 CTCFLQ8NI51 663 aaPredicted RBP12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 NSUN6Q8TEA1 469 aaKnown RBP12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 KCNB2Q92953 911 aa12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 VTI1AQ96AJ9 217 aa12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 TOX2Q96NM4 488 aa12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 MAF1Q9H063 256 aa12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 PRKAG2Q9UGJ0 569 aa12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 TBX21Q9UL17 535 aa12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 SCN5AQ14524 2016 aa12.86□□□□□ -0.35
LPCAT4-202ENST00000562404 TRIP12Q14669 1992 aaPredicted RBP12.85□□□□□ -0.35
LPCAT4-202ENST00000562404 RBAK-RBAKDNI3L0D1 243 aa12.85□□□□□ -0.35
LPCAT4-202ENST00000562404 CD4P01730 458 aa12.85□□□□□ -0.35
LPCAT4-202ENST00000562404 NEFLP07196 543 aa12.85□□□□□ -0.35
LPCAT4-202ENST00000562404 NR3C2P08235 984 aa12.85□□□□□ -0.35
LPCAT4-202ENST00000562404 TXNP10599 105 aaKnown RBP12.85□□□□□ -0.35
LPCAT4-202ENST00000562404 PURAQ00577 322 aaKnown RBP12.85□□□□□ -0.35
LPCAT4-202ENST00000562404 PPP2R5BQ15173 497 aa12.85□□□□□ -0.35
LPCAT4-202ENST00000562404 SHHQ15465 462 aa12.85□□□□□ -0.35
LPCAT4-202ENST00000562404 LRIT3Q3SXY7 679 aa12.85□□□□□ -0.35
LPCAT4-202ENST00000562404 ARHGEF16Q5VV41 709 aa12.85□□□□□ -0.35
LPCAT4-202ENST00000562404 APOA5Q6Q788 366 aa12.85□□□□□ -0.35
LPCAT4-202ENST00000562404 CCDC82Q8N4S0 544 aa12.85□□□□□ -0.35
LPCAT4-202ENST00000562404 SCFD2Q8WU76 684 aa12.85□□□□□ -0.35
LPCAT4-202ENST00000562404 GPKOWQ92917 476 aaPredicted RBP eCLIP12.85□□□□□ -0.35
LPCAT4-202ENST00000562404 LBHD1Q9BQE6 289 aaPredicted RBP12.85□□□□□ -0.35
LPCAT4-202ENST00000562404 PDCD2LQ9BRP1 358 aa12.85□□□□□ -0.35
LPCAT4-202ENST00000562404 TMEM39AQ9NV64 488 aa12.85□□□□□ -0.35
LPCAT4-202ENST00000562404 DCDC2CA8MYV0 355 aa12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 MYCLP12524 364 aaPredicted RBP12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 HSPA4P34932 840 aa12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 ARHGAP1Q07960 439 aa12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 ITGA7Q13683 1181 aa12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 PGM5Q15124 567 aa12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 STXBP2Q15833 593 aa12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 RNF20Q5VTR2 975 aa12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 TMTC3Q6ZXV5 915 aa12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 DHX32Q7L7V1 743 aaKnown RBP12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 FCHSD1Q86WN1 690 aa12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 MICU3Q86XE3 530 aa12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 TMTC2Q8N394 836 aa12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 FANCBQ8NB91 859 aa12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 IWS1Q96ST2 819 aa12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 FAM217BQ9NTX9 383 aaPredicted RBP12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 DDX41Q9UJV9 622 aaKnown RBP12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 SNX14Q9Y5W7 946 aa12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 SLC12A7Q9Y666 1083 aa12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 UMODL1Q5DID0 1318 aa12.84□□□□□ -0.35
LPCAT4-202ENST00000562404 A6NJR5 290 aa12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 GCOM1H8Y6P7 765 aaPredicted RBP12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 MEIS2O14770 477 aa12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 B4GALT4O60513 344 aa12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 MYL3P08590 195 aa12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 POLR2MP0CAP2 368 aa12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 RAG1P15918 1043 aa12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 SMARCA1P28370 1054 aa12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 KIF5BP33176 963 aa12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 FUT2Q10981 343 aa12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 TTLL4Q14679 1199 aa12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 USP17L6PQ6QN14 398 aa12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 VSIG10LQ86VR7 867 aa12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 AFG1LQ8WV93 481 aa12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 MPHOSPH6Q99547 160 aaKnown RBP12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 PPP1R12CQ9BZL4 782 aa12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 TRPV6Q9H1D0 765 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms