RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 STK25O00506 426 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 ACTN1P12814 892 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 ANXA13P27216 316 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 RXRBP28702 533 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 LONP1P36776 959 aaKnown RBP12.25□□□□□ -0.45
RPAP1-204ENST00000562303 ZNF827Q17R98 1081 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 PHLDB3Q6NSJ2 640 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 TM6SF1Q9BZW5 370 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 SLC8A2Q9UPR5 921 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 FNDC3AQ9Y2H6 1198 aaKnown RBP12.25□□□□□ -0.45
RPAP1-204ENST00000562303 MAP3K15Q6ZN16 1313 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 MYO1FO00160 1098 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 KCNQ3O43525 872 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 GPATCH4Q5T3I0 446 aaKnown RBP12.25□□□□□ -0.45
RPAP1-204ENST00000562303 ELMSAN1Q6PJG2 1045 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 ABCF3Q9NUQ8 709 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 BAIAP2L1Q9UHR4 511 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 MAGED2Q9UNF1 606 aaPredicted RBP12.25□□□□□ -0.45
RPAP1-204ENST00000562303 LEMD3Q9Y2U8 911 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 ZNF233A6NK53 670 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 OAS2P29728 719 aaKnown RBP12.25□□□□□ -0.45
RPAP1-204ENST00000562303 ELF1P32519 619 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 MESDQ14696 234 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 ASPRV1Q53RT3 343 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 C7orf31Q8N865 590 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 GDAP1Q8TB36 358 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.25□□□□□ -0.453e-6■■■■□ 20.9
RPAP1-204ENST00000562303 DESI2Q9BSY9 194 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 GREM2Q9H772 168 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 PASKQ96RG2 1323 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 TTLL1O95922 423 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 INPP1P49441 399 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 MUM1Q2TAK8 710 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 SYMPKQ92797 1274 aaKnown RBP12.25□□□□□ -0.45
RPAP1-204ENST00000562303 TRIM35Q9UPQ4 493 aa12.25□□□□□ -0.45
RPAP1-204ENST00000562303 ARHGEF37A1IGU5 675 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 TTC4O95801 387 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 SERPINB2P05120 415 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 INHBAP08476 426 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 PTGDRQ13258 359 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 EEPD1Q7L9B9 569 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 ACCSQ96QU6 501 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 ZNF215Q9UL58 517 aaPredicted RBP12.24□□□□□ -0.45
RPAP1-204ENST00000562303 BTBD18B2RXH4 712 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 TFAMQ00059 246 aaKnown RBP12.24□□□□□ -0.45
RPAP1-204ENST00000562303 SLC12A1Q13621 1099 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 NAA35Q5VZE5 725 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 CEP170P1Q96L14 293 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 PPP1R16BQ96T49 567 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 FGAP02671 866 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 CPSF2Q9P2I0 782 aaKnown RBP12.24□□□□□ -0.45
RPAP1-204ENST00000562303 PTPN22Q9Y2R2 807 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 GOLGA8SH3BPF8 625 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 PFKFB2O60825 505 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 CC2D2BQ6DHV5 1058 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 ZBTB33Q86T24 672 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 SPDL1Q96EA4 605 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 LRRC4Q9HBW1 653 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 RIPOR2Q9Y4F9 1068 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 PCP11498 1178 aaKnown RBP12.24□□□□□ -0.45
RPAP1-204ENST00000562303 STX1BP61266 288 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 CLIC6Q96NY7 704 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 TACO1Q9BSH4 297 aaKnown RBP12.24□□□□□ -0.45
RPAP1-204ENST00000562303 ZBED2Q9BTP6 218 aa12.24□□□□□ -0.45
RPAP1-204ENST00000562303 EIF3CLB5ME19 914 aaKnown RBP12.23□□□□□ -0.45
RPAP1-204ENST00000562303 POC1B-GALNT4F8VUJ3 575 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 NVLO15381 856 aaKnown RBP12.23□□□□□ -0.45
RPAP1-204ENST00000562303 BNIP3LO60238 219 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 PHKA1P46020 1223 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 ZNF772Q68DY9 489 aaPredicted RBP12.23□□□□□ -0.45
RPAP1-204ENST00000562303 DNAAF3Q8N9W5 541 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 CFAP61Q8NHU2 1237 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 USP28Q96RU2 1077 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 EIF3CQ99613 913 aaKnown RBP12.23□□□□□ -0.45
RPAP1-204ENST00000562303 GAP43P17677 238 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 PSMC2P35998 433 aaKnown RBP12.23□□□□□ -0.45
RPAP1-204ENST00000562303 ARL4AP40617 200 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 IREB2P48200 963 aaKnown RBP12.23□□□□□ -0.45
RPAP1-204ENST00000562303 EPHB1P54762 984 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 LMNB2Q03252 620 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 KRT33BQ14525 404 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 FAM196AQ6ZSG2 479 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 LRRC8CQ8TDW0 803 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 OLA1Q9NTK5 396 aaKnown RBP12.23□□□□□ -0.45
RPAP1-204ENST00000562303 WDR64B1ANS9 1081 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 RAD17O75943 681 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 PTH1RQ03431 593 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 THOC5Q13769 683 aaKnown RBP12.23□□□□□ -0.45
RPAP1-204ENST00000562303 EFCAB13Q8IY85 973 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 TRIML1Q8N9V2 468 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 RNF217Q8TC41 542 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 TRIM11Q96F44 468 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 SOS2Q07890 1332 aaPredicted RBP12.23□□□□□ -0.45
RPAP1-204ENST00000562303 SLC16A2P36021 539 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 C1orf228Q6PIY5 440 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 TTC30AQ86WT1 665 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 SIX6OS1Q8N1H7 587 aa12.23□□□□□ -0.45
RPAP1-204ENST00000562303 SART1O43290 800 aaKnown RBP12.22□□□□□ -0.45
RPAP1-204ENST00000562303 EAF2Q96CJ1 260 aaPredicted RBP12.22□□□□□ -0.45
RPAP1-204ENST00000562303 ZNF653Q96CK0 615 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms