RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 OVOS1Q6IE37 1185 aa7.53□□□□□ -1.2
UBR1-203ENST00000562173 C22orf34Q6ZV56 151 aa7.53□□□□□ -1.2
UBR1-203ENST00000562173 TOP6BLQ8N6T0 577 aa7.53□□□□□ -1.2
UBR1-203ENST00000562173 SMC1BQ8NDV3 1235 aa7.53□□□□□ -1.2
UBR1-203ENST00000562173 FLAD1Q8NFF5 587 aa7.53□□□□□ -1.2
UBR1-203ENST00000562173 CARD11Q9BXL7 1154 aa7.53□□□□□ -1.2
UBR1-203ENST00000562173 OSBPL1AQ9BXW6 950 aa7.53□□□□□ -1.2
UBR1-203ENST00000562173 KRTAP4-8Q9BYQ9 185 aa7.53□□□□□ -1.2
UBR1-203ENST00000562173 TMOD3Q9NYL9 352 aa7.53□□□□□ -1.2
UBR1-203ENST00000562173 KLHL3Q9UH77 587 aa7.53□□□□□ -1.2
UBR1-203ENST00000562173 INSRP06213 1382 aa7.53□□□□□ -1.2
UBR1-203ENST00000562173 ZNF831Q5JPB2 1677 aa7.53□□□□□ -1.2
UBR1-203ENST00000562173 ADAMTSL1Q8N6G6 1762 aa7.53□□□□□ -1.2
UBR1-203ENST00000562173 COL4A5P29400 1685 aa7.52□□□□□ -1.21
UBR1-203ENST00000562173 RTL1A6NKG5 1358 aa7.52□□□□□ -1.21
UBR1-203ENST00000562173 ST20-MTHFSA0A0A6YYL1 179 aa7.52□□□□□ -1.21
UBR1-203ENST00000562173 IGF2BP3O00425 579 aaKnown RBP eCLIP7.52□□□□□ -1.21
UBR1-203ENST00000562173 DDNO94850 711 aaPredicted RBP7.52□□□□□ -1.21
UBR1-203ENST00000562173 FGRP09769 529 aa7.52□□□□□ -1.21
UBR1-203ENST00000562173 FAM87AP0C7U9 286 aa7.52□□□□□ -1.21
UBR1-203ENST00000562173 NASPP49321 788 aaPredicted RBP7.52□□□□□ -1.21
UBR1-203ENST00000562173 ARID5AQ03989 594 aa7.52□□□□□ -1.21
UBR1-203ENST00000562173 NAALADL2Q58DX5 795 aa7.52□□□□□ -1.21
UBR1-203ENST00000562173 DALRD3Q5D0E6 543 aaKnown RBP7.52□□□□□ -1.21
UBR1-203ENST00000562173 LETMD1Q6P1Q0 360 aa7.52□□□□□ -1.21
UBR1-203ENST00000562173 NLRC3Q7RTR2 1065 aa7.52□□□□□ -1.21
UBR1-203ENST00000562173 C19orf47Q8N9M1 422 aaKnown RBP7.52□□□□□ -1.21
UBR1-203ENST00000562173 MIPEPQ99797 713 aa7.52□□□□□ -1.21
UBR1-203ENST00000562173 TM9SF2Q99805 663 aa7.52□□□□□ -1.21
UBR1-203ENST00000562173 SRRTQ9BXP5 876 aaKnown RBP7.52□□□□□ -1.21
UBR1-203ENST00000562173 CNNM2Q9H8M5 875 aa7.52□□□□□ -1.21
UBR1-203ENST00000562173 MKNK2Q9HBH9 465 aa7.52□□□□□ -1.21
UBR1-203ENST00000562173 GTF2IRD1Q9UHL9 959 aa7.52□□□□□ -1.21
UBR1-203ENST00000562173 PLEKHG2Q9H7P9 1386 aa7.51□□□□□ -1.21
UBR1-203ENST00000562173 SLC22A31A6NKX4 558 aa7.51□□□□□ -1.21
UBR1-203ENST00000562173 TNNT2P45379 298 aaPredicted RBP7.51□□□□□ -1.21
UBR1-203ENST00000562173 CRKLP46109 303 aaKnown RBP7.51□□□□□ -1.21
UBR1-203ENST00000562173 INTS5Q6P9B9 1019 aaKnown RBP7.51□□□□□ -1.21
UBR1-203ENST00000562173 ZNF765Q7L2R6 523 aa7.51□□□□□ -1.21
UBR1-203ENST00000562173 DNAJC10Q8IXB1 793 aa7.51□□□□□ -1.21
UBR1-203ENST00000562173 FBXL6Q8N531 539 aa7.51□□□□□ -1.21
UBR1-203ENST00000562173 SMARCC1Q92922 1105 aaPredicted RBP7.51□□□□□ -1.21
UBR1-203ENST00000562173 ABHD8Q96I13 439 aa7.51□□□□□ -1.21
UBR1-203ENST00000562173 PIM2Q9P1W9 311 aa7.51□□□□□ -1.21
UBR1-203ENST00000562173 PPT2Q9UMR5 302 aa7.51□□□□□ -1.21
UBR1-203ENST00000562173 USP42Q9H9J4 1324 aaKnown RBP7.51□□□□□ -1.21
UBR1-203ENST00000562173 FLT4P35916 1363 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 FAM170BA6NMN3 283 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 WDR64B1ANS9 1081 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 TNFRSF10CO14798 259 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 DNAJA2O60884 412 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 SLITRK5O94991 958 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 HSPA8P11142 646 aaKnown RBP7.5□□□□□ -1.21
UBR1-203ENST00000562173 RAG1P15918 1043 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 CYP7A1P22680 504 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 GRIK1P39086 918 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 EIF6P56537 245 aaKnown RBP7.5□□□□□ -1.21
UBR1-203ENST00000562173 SLC39A6Q13433 755 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 NFIXQ14938 502 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 NBPF11Q86T75 865 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 DNAJB8Q8NHS0 232 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 CCDC74BQ96LY2 380 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 CRBNQ96SW2 442 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 DPH2Q9BQC3 489 aaPredicted RBP7.5□□□□□ -1.21
UBR1-203ENST00000562173 LGR6Q9HBX8 967 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 PRDM5Q9NQX1 630 aaPredicted RBP7.5□□□□□ -1.21
UBR1-203ENST00000562173 TERF2IPQ9NYB0 399 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 LEMD3Q9Y2U8 911 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 ARFGEF2Q9Y6D5 1785 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 KDM2BQ8NHM5 1336 aa7.5□□□□□ -1.21
UBR1-203ENST00000562173 GLTPD2A6NH11 291 aa7.49□□□□□ -1.21
UBR1-203ENST00000562173 RGS13O14921 159 aa7.49□□□□□ -1.21
UBR1-203ENST00000562173 RPS6KA4O75676 772 aa7.49□□□□□ -1.21
UBR1-203ENST00000562173 EOMESO95936 686 aa7.49□□□□□ -1.21
UBR1-203ENST00000562173 NME1P15531 152 aaKnown RBP7.49□□□□□ -1.21
UBR1-203ENST00000562173 TM4SF1P30408 202 aa7.49□□□□□ -1.21
UBR1-203ENST00000562173 RFC4P35249 363 aa7.49□□□□□ -1.21
UBR1-203ENST00000562173 GIPRP48546 466 aa7.49□□□□□ -1.21
UBR1-203ENST00000562173 EIF4A2Q14240 407 aaKnown RBP7.49□□□□□ -1.21
UBR1-203ENST00000562173 ARSHQ5FYA8 562 aa7.49□□□□□ -1.21
UBR1-203ENST00000562173 INTS3Q68E01 1043 aaKnown RBP7.49□□□□□ -1.21
UBR1-203ENST00000562173 DLK2Q6UY11 383 aa7.49□□□□□ -1.21
UBR1-203ENST00000562173 LSRQ86X29 649 aaPredicted RBP7.49□□□□□ -1.21
UBR1-203ENST00000562173 ATG4CQ96DT6 458 aa7.49□□□□□ -1.21
UBR1-203ENST00000562173 SLC12A7Q9Y666 1083 aa7.49□□□□□ -1.21
UBR1-203ENST00000562173 ZNF541Q9H0D2 1346 aa7.49□□□□□ -1.21
UBR1-203ENST00000562173 CNTNAP1P78357 1384 aa7.48□□□□□ -1.21
UBR1-203ENST00000562173 SCN7AQ01118 1682 aa7.48□□□□□ -1.21
UBR1-203ENST00000562173 CCDC85CA6NKD9 419 aa7.48□□□□□ -1.21
UBR1-203ENST00000562173 FOSL1P15407 271 aa7.48□□□□□ -1.21
UBR1-203ENST00000562173 KIR3DL1P43629 444 aa7.48□□□□□ -1.21
UBR1-203ENST00000562173 PIP4K2AP48426 406 aaPredicted RBP7.48□□□□□ -1.21
UBR1-203ENST00000562173 CD97P48960 835 aa7.48□□□□□ -1.21
UBR1-203ENST00000562173 SF3A1Q15459 793 aaKnown RBP7.48□□□□□ -1.21
UBR1-203ENST00000562173 SMG6Q86US8 1419 aaKnown RBP7.48□□□□□ -1.21
UBR1-203ENST00000562173 PHACTR4Q8IZ21 702 aa7.48□□□□□ -1.21
UBR1-203ENST00000562173 SHDQ96IW2 340 aa7.48□□□□□ -1.21
UBR1-203ENST00000562173 TRPM7Q96QT4 1865 aa7.48□□□□□ -1.21
UBR1-203ENST00000562173 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.48□□□□□ -1.21
UBR1-203ENST00000562173 ASPNQ9BXN1 380 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms