RNA–Protein interactions for RNA: ENST00000562053.1

TUBGCP4-203, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-203ENST00000562053 VTA1Q9NP79 307 aa8.21□□□□□ -1.1
TUBGCP4-203ENST00000562053 BARHL2Q9NY43 387 aa8.21□□□□□ -1.1
TUBGCP4-203ENST00000562053 ZHX1Q9UKY1 873 aaPredicted RBP8.21□□□□□ -1.1
TUBGCP4-203ENST00000562053 OGDHLQ9ULD0 1010 aa8.21□□□□□ -1.1
TUBGCP4-203ENST00000562053 DDX49Q9Y6V7 483 aaKnown RBP8.21□□□□□ -1.1
TUBGCP4-203ENST00000562053 STK36Q9NRP7 1315 aa8.21□□□□□ -1.1
TUBGCP4-203ENST00000562053 CEP290O15078 2479 aa8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 ESYT2A0FGR8 921 aa8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 GCOM1H8Y6P7 765 aaPredicted RBP8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 MEIS2O14770 477 aa8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 PRPF3O43395 683 aaKnown RBP8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 PFKFB2O60825 505 aa8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 FARP2O94887 1054 aaPredicted RBP8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 POLR2MP0CAP2 368 aa8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 CNGA1P29973 690 aa8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 HOXA13P31271 388 aaPredicted RBP8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 MNX1P50219 401 aaPredicted RBP8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 SCRN1Q12765 414 aa8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 STK3Q13188 491 aa8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 ACVR2BQ13705 512 aa8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 RABEP1Q15276 862 aa8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 PKN1Q16512 942 aa8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 PRAMEF19Q5SWL8 479 aa8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 NSUN6Q8TEA1 469 aaKnown RBP8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 PHKBQ93100 1093 aa8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 RMDN3Q96TC7 470 aa8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 MPHOSPH6Q99547 160 aaKnown RBP8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 PDCD2LQ9BRP1 358 aa8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 LARP6Q9BRS8 491 aaKnown RBP8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 BACH2Q9BYV9 841 aa8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 PXMP2Q9NR77 195 aa8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 V9GY48 417 aaPredicted RBP8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 MYH7BA7E2Y1 1941 aa8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 SYNRGQ9UMZ2 1314 aa8.2□□□□□ -1.1
TUBGCP4-203ENST00000562053 DOCK5Q9H7D0 1870 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 DNM1LO00429 736 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 CPLX1O14810 134 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 ADAMTS4O75173 837 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 CDKL5O76039 1030 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 RARBP10826 455 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 EIF2AK2P19525 551 aaKnown RBP8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 ADCY7P51828 1080 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 NAPAP54920 295 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 PDE4DQ08499 809 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 ST3GAL1Q11201 340 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 PGM5Q15124 567 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 ME3Q16798 604 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 CCDC144BQ3MJ40 725 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 TAPT1Q6NXT6 567 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 NOL8Q76FK4 1167 aaKnown RBP8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 TRIM22Q8IYM9 498 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 IL31RAQ8NI17 732 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 DIS3LQ8TF46 1054 aaKnown RBP8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 CUL5Q93034 780 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 TAAR1Q96RJ0 339 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 IWS1Q96ST2 819 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 SLC26A6Q9BXS9 759 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 UPF3AQ9H1J1 476 aaKnown RBP8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 SLKQ9H2G2 1235 aaPredicted RBP8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 XPNPEP3Q9NQH7 507 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 FAM184BQ9ULE4 1060 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 SCN10AQ9Y5Y9 1956 aa8.19□□□□□ -1.1
TUBGCP4-203ENST00000562053 LTBP2Q14767 1821 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 RBM47A0AV96 593 aaKnown RBP8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 B4DLN1 442 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 PPFIA3O75145 1194 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 DUSP11O75319 330 aaKnown RBP8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 DEXIO95424 95 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 CTDNEP1O95476 244 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 NR3C2P08235 984 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 COL6A1P12109 1028 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 CST5P28325 142 aaPredicted RBP8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 ADCYAP1R1P41586 468 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 MRPL12P52815 198 aaKnown RBP8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 AP3B2Q13367 1082 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 UBE2SQ16763 222 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 ARHGEF16Q5VV41 709 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 ANO1Q5XXA6 986 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 CPLX2Q6PUV4 134 aaKnown RBP8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 USP17L6PQ6QN14 398 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 EEPD1Q7L9B9 569 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 TLK2Q86UE8 772 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 FCHSD1Q86WN1 690 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 FAM177A1Q8N128 213 aaPredicted RBP8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 IL27Q8NEV9 243 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 CCDC148Q8NFR7 591 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 SMARCC2Q8TAQ2 1214 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 SCFD2Q8WU76 684 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 CCDC12Q8WUD4 166 aaPredicted RBP8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 ZMYND12Q9H0C1 365 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 GLT8D2Q9H1C3 349 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 PSTPIP2Q9H939 334 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 RIC8AQ9NPQ8 531 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 PDGFCQ9NRA1 345 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 GNEQ9Y223 722 aaKnown RBP8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 SSUH2Q9Y2M2 353 aa8.18□□□□□ -1.1
TUBGCP4-203ENST00000562053 MYADML2A6NDP7 307 aa8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 SPDYE3A6NKU9 549 aa8.17□□□□□ -1.1
TUBGCP4-203ENST00000562053 ST18O60284 1047 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms