RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 FAAP100Q0VG06 881 aa10.99□□□□□ -0.65
NSMCE1-203ENST00000562039 PPP2R5BQ15173 497 aa10.99□□□□□ -0.65
NSMCE1-203ENST00000562039 SHHQ15465 462 aa10.99□□□□□ -0.65
NSMCE1-203ENST00000562039 LY6KQ17RY6 165 aa10.99□□□□□ -0.65
NSMCE1-203ENST00000562039 DUSP28Q4G0W2 176 aa10.99□□□□□ -0.65
NSMCE1-203ENST00000562039 MICU3Q86XE3 530 aa10.99□□□□□ -0.65
NSMCE1-203ENST00000562039 MCF2L2Q86YR7 1114 aa10.99□□□□□ -0.65
NSMCE1-203ENST00000562039 IL31RAQ8NI17 732 aa10.99□□□□□ -0.65
NSMCE1-203ENST00000562039 CTCFLQ8NI51 663 aaPredicted RBP10.99□□□□□ -0.65
NSMCE1-203ENST00000562039 MTMR8Q96EF0 704 aa10.99□□□□□ -0.65
NSMCE1-203ENST00000562039 NEK1Q96PY6 1258 aa10.99□□□□□ -0.65
NSMCE1-203ENST00000562039 RIOX1Q9H6W3 641 aa10.99□□□□□ -0.65
NSMCE1-203ENST00000562039 PNMA2Q9UL42 364 aa10.99□□□□□ -0.65
NSMCE1-203ENST00000562039 A0A0U1RQG5 324 aaPredicted RBP10.98□□□□□ -0.65
NSMCE1-203ENST00000562039 DCDC2CA8MYV0 355 aa10.98□□□□□ -0.65
NSMCE1-203ENST00000562039 ARVCFO00192 962 aa10.98□□□□□ -0.65
NSMCE1-203ENST00000562039 EDNRBP24530 442 aa10.98□□□□□ -0.65
NSMCE1-203ENST00000562039 ITGA7Q13683 1181 aa10.98□□□□□ -0.65
NSMCE1-203ENST00000562039 FAM47CQ5HY64 1035 aa10.98□□□□□ -0.65
NSMCE1-203ENST00000562039 Q7L0L9 218 aa10.98□□□□□ -0.65
NSMCE1-203ENST00000562039 SRBD1Q8N5C6 995 aaKnown RBP10.98□□□□□ -0.65
NSMCE1-203ENST00000562039 DNERQ8NFT8 737 aa10.98□□□□□ -0.65
NSMCE1-203ENST00000562039 NSUN6Q8TEA1 469 aaKnown RBP10.98□□□□□ -0.65
NSMCE1-203ENST00000562039 MPHOSPH6Q99547 160 aaKnown RBP10.98□□□□□ -0.65
NSMCE1-203ENST00000562039 TRPV6Q9H1D0 765 aa10.98□□□□□ -0.65
NSMCE1-203ENST00000562039 PXMP2Q9NR77 195 aa10.98□□□□□ -0.65
NSMCE1-203ENST00000562039 SLC12A7Q9Y666 1083 aa10.98□□□□□ -0.65
NSMCE1-203ENST00000562039 GRIN2DO15399 1336 aa10.98□□□□□ -0.65
NSMCE1-203ENST00000562039 LTBP2Q14767 1821 aa10.98□□□□□ -0.65
NSMCE1-203ENST00000562039 PNMA6FA0A0J9YX94 578 aa10.97□□□□□ -0.65
NSMCE1-203ENST00000562039 RBM47A0AV96 593 aaKnown RBP10.97□□□□□ -0.65
NSMCE1-203ENST00000562039 ZEB2O60315 1214 aa10.97□□□□□ -0.65
NSMCE1-203ENST00000562039 DDAH1O94760 285 aa10.97□□□□□ -0.65
NSMCE1-203ENST00000562039 NR3C2P08235 984 aa10.97□□□□□ -0.65
NSMCE1-203ENST00000562039 CDK7P50613 346 aa10.97□□□□□ -0.65
NSMCE1-203ENST00000562039 RNF20Q5VTR2 975 aa10.97□□□□□ -0.65
NSMCE1-203ENST00000562039 RGS22Q8NE09 1264 aa10.97□□□□□ -0.65
NSMCE1-203ENST00000562039 SCFD2Q8WU76 684 aa10.97□□□□□ -0.65
NSMCE1-203ENST00000562039 GPKOWQ92917 476 aaPredicted RBP eCLIP10.97□□□□□ -0.65
NSMCE1-203ENST00000562039 RRP36Q96EU6 259 aaKnown RBP10.97□□□□□ -0.65
NSMCE1-203ENST00000562039 TMEM87BQ96K49 555 aa10.97□□□□□ -0.65
NSMCE1-203ENST00000562039 FAM161BQ96MY7 647 aa10.97□□□□□ -0.65
NSMCE1-203ENST00000562039 BRPF3Q9ULD4 1205 aa10.97□□□□□ -0.65
NSMCE1-203ENST00000562039 ELP1O95163 1332 aa10.97□□□□□ -0.65
NSMCE1-203ENST00000562039 UMODL1Q5DID0 1318 aa10.97□□□□□ -0.65
NSMCE1-203ENST00000562039 SZT2Q5T011 3432 aa10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 GCOM1H8Y6P7 765 aaPredicted RBP10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 KIAA0355O15063 1070 aa10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 PPFIA3O75145 1194 aa10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 POLR2MP0CAP2 368 aa10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 ACRP10323 421 aa10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 KIF5BP33176 963 aa10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 CYP2C18P33260 490 aa10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 HSD17B4P51659 736 aa10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 CCL23P55773 120 aa10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 TTLL4Q14679 1199 aa10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 STXBP2Q15833 593 aa10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 C1orf53Q5VUE5 145 aa10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 USP17L6PQ6QN14 398 aa10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 ANKRD33Q7Z3H0 272 aa10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 FAM126BQ8IXS8 530 aa10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 AFG1LQ8WV93 481 aa10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 JAKMIP1Q96N16 626 aaKnown RBP10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 PDCD2LQ9BRP1 358 aa10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 TRMT13Q9NUP7 481 aaKnown RBP10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 RTEL1Q9NZ71 1219 aa10.96□□□□□ -0.65
NSMCE1-203ENST00000562039 LAMA3Q16787 3333 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 KLF18A0A0U1RQI7 1052 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 A0A1W2PPC1 479 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 B4DLN1 442 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 TLR3O15455 904 aaKnown RBP10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 B4GALT4O60513 344 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 CYP2C9P11712 490 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 CPT1AP50416 773 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 MRPL12P52815 198 aaKnown RBP10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 FGD1P98174 961 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 PURAQ00577 322 aaKnown RBP10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 FPGSQ05932 587 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 ARHGAP1Q07960 439 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 PGM5Q15124 567 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 UBE2SQ16763 222 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 CCDC62Q6P9F0 684 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 SYNE3Q6ZMZ3 975 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 DHX32Q7L7V1 743 aaKnown RBP10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 SMARCC2Q8TAQ2 1214 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 BCAS3Q9H6U6 928 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 SEC63Q9UGP8 760 aaKnown RBP10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 TBX21Q9UL17 535 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 Q9Y3F1 56 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 SNX14Q9Y5W7 946 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 MRVI1Q9Y6F6 885 aa10.95□□□□□ -0.66
NSMCE1-203ENST00000562039 GOLGA8AA7E2F4 631 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 GOLGA8BA8MQT2 603 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 TIMP1P01033 207 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 GH1P01241 217 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 CSF2RAP15509 400 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 LIFRP42702 1097 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 NKX3-2P78367 333 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 EXOSC10Q01780 885 aaKnown RBP10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 APOBRQ0VD83 1088 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms