RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 TTI2Q6NXR4 508 aa11□□□□□ -0.65
SMG1-205ENST00000561947 IRF2BP1Q8IU81 584 aa11□□□□□ -0.65
SMG1-205ENST00000561947 NOC3LQ8WTT2 800 aaKnown RBP11□□□□□ -0.65
SMG1-205ENST00000561947 FAM151AQ8WW52 585 aa11□□□□□ -0.65
SMG1-205ENST00000561947 LARP4BQ92615 738 aaKnown RBP11□□□□□ -0.65
SMG1-205ENST00000561947 RAD54LQ92698 747 aa11□□□□□ -0.65
SMG1-205ENST00000561947 TRIM47Q96LD4 638 aa11□□□□□ -0.65
SMG1-205ENST00000561947 VPS16Q9H269 839 aa11□□□□□ -0.65
SMG1-205ENST00000561947 PPP2R2CQ9Y2T4 447 aa11□□□□□ -0.65
SMG1-205ENST00000561947 RRP9O43818 475 aaKnown RBP10.99□□□□□ -0.65
SMG1-205ENST00000561947 MFAP3LO75121 409 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 EEF1GP26641 437 aaKnown RBP10.99□□□□□ -0.65
SMG1-205ENST00000561947 USP11P51784 963 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 SPDYE2Q495Y8 402 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 COBLL1Q53SF7 1204 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 MCTP2Q6DN12 878 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 CNNM4Q6P4Q7 775 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 BTNL9Q6UXG8 535 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 P2RX5Q93086 422 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 VPS33BQ9H267 617 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMG1-205ENST00000561947 CNTNAP1P78357 1384 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 A0A1W2PRG0 241 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 BICDL2A1A5D9 508 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 MYMKA6NI61 221 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 MEIS2O14770 477 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 MARCH6O60337 910 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 CCNE1P24864 410 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 SNAP25P60880 206 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 STK4Q13043 487 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 IKQ13123 557 aaPredicted RBP10.99□□□□□ -0.65
SMG1-205ENST00000561947 SYT10Q6XYQ8 523 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 FBXO11Q86XK2 927 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 ZNF710Q8N1W2 664 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 OGFOD1Q8N543 542 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 CCDC51Q96ER9 411 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 MBOAT7Q96N66 472 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 NUDT12Q9BQG2 462 aa10.99□□□□□ -0.65
SMG1-205ENST00000561947 NAA15Q9BXJ9 866 aaKnown RBP10.99□□□□□ -0.65
SMG1-205ENST00000561947 CYP3A7-CYP3A51PA0A087WV96 503 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 PVALEFA0A1B0GWK0 134 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 GOLGA6L9A6NEM1 432 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 GYPCP04921 128 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 TPM1P09493 284 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 FCER1AP12319 257 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 CYP3A7P24462 503 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 SF3B2Q13435 895 aaKnown RBP10.98□□□□□ -0.65
SMG1-205ENST00000561947 TRIM14Q14142 442 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 SYCP1Q15431 976 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 MOXD1Q6UVY6 613 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 UNC13DQ70J99 1090 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 DEFB132Q7Z7B7 95 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 CNGA4Q8IV77 575 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 SLC16A10Q8TF71 515 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 CPLX3Q8WVH0 158 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 MAP7D2Q96T17 732 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 DUSP9Q99956 384 aaKnown RBP10.98□□□□□ -0.65
SMG1-205ENST00000561947 SRRTQ9BXP5 876 aaKnown RBP10.98□□□□□ -0.65
SMG1-205ENST00000561947 LRRC27Q9C0I9 530 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 ARHGEF10LQ9HCE6 1279 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 CASP14P31944 242 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 MMP14P50281 582 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 ETF1P62495 437 aaKnown RBP10.98□□□□□ -0.65
SMG1-205ENST00000561947 TOGARAM2Q6ZUX3 1019 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 MTERF4Q7Z6M4 381 aaKnown RBP10.98□□□□□ -0.65
SMG1-205ENST00000561947 CREBRFQ8IUR6 639 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 KIAA0895Q8NCT3 520 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 CRYGNQ8WXF5 182 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 KCNMB3Q9NPA1 279 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 MAGEC2Q9UBF1 373 aaPredicted RBP10.98□□□□□ -0.65
SMG1-205ENST00000561947 PCDHA12Q9UN75 941 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 ZBTB12Q9Y330 459 aaPredicted RBP10.98□□□□□ -0.65
SMG1-205ENST00000561947 PHLPP2Q6ZVD8 1323 aa10.98□□□□□ -0.65
SMG1-205ENST00000561947 LGALS16A8MUM7 142 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 FECHP22830 423 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 HSP90AA2PQ14568 343 aaPredicted RBP10.97□□□□□ -0.65
SMG1-205ENST00000561947 USH1GQ495M9 461 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 HYIQ5T013 277 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 FKBP1CQ5VVH2 108 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 TRIM65Q6PJ69 517 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 KCNK18Q7Z418 384 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 NIM1KQ8IY84 436 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 CSGALNACT2Q8N6G5 542 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 GJA10Q969M2 543 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 P2RX7Q99572 595 aaKnown RBP10.97□□□□□ -0.65
SMG1-205ENST00000561947 ZNRF3Q9ULT6 936 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 KDM3AQ9Y4C1 1321 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 SLC26A4O43511 780 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 HOXA7P31268 230 aaPredicted RBP10.97□□□□□ -0.65
SMG1-205ENST00000561947 FXR1P51114 621 aaKnown RBP eCLIP10.97□□□□□ -0.65
SMG1-205ENST00000561947 ARHGAP4P98171 946 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 UBXN1Q04323 297 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 ECM1Q16610 540 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 ANKRD40Q6AI12 368 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 MTMR14Q8NCE2 650 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 AGBL3Q8NEM8 1001 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 ZBTB21Q9ULJ3 1066 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 PRR12Q9ULL5 1215 aa10.97□□□□□ -0.65
SMG1-205ENST00000561947 SOWAHDA6NJG2 315 aa10.96□□□□□ -0.65
SMG1-205ENST00000561947 FOSP01100 380 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms