RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 ADCK5Q3MIX3 580 aa27.62■■■□□ 2.01
CDR2-202ENST00000561630 DHX32Q7L7V1 743 aaKnown RBP27.62■■■□□ 2.01
CDR2-202ENST00000561630 SAMD3Q8N6K7 520 aa27.62■■■□□ 2.01
CDR2-202ENST00000561630 IWS1Q96ST2 819 aa27.62■■■□□ 2.01
CDR2-202ENST00000561630 PDLIM7Q9NR12 457 aa27.62■■■□□ 2.01
CDR2-202ENST00000561630 ANKRD33Q7Z3H0 272 aa27.61■■■□□ 2.01
CDR2-202ENST00000561630 SCFD2Q8WU76 684 aa27.61■■■□□ 2.01
CDR2-202ENST00000561630 KCNB2Q92953 911 aa27.61■■■□□ 2.01
CDR2-202ENST00000561630 MDM2Q00987 491 aaPredicted RBP27.6■■■□□ 2.01
CDR2-202ENST00000561630 TOX2Q96NM4 488 aa27.6■■■□□ 2.01
CDR2-202ENST00000561630 ZEB2O60315 1214 aa27.59■■■□□ 2.01
CDR2-202ENST00000561630 PQBP1O60828 265 aaKnown RBP27.59■■■□□ 2.01
CDR2-202ENST00000561630 PLEKHA8P1O95397 391 aa27.59■■■□□ 2.01
CDR2-202ENST00000561630 RXRAP19793 462 aa27.59■■■□□ 2.01
CDR2-202ENST00000561630 PPP2R5BQ15173 497 aa27.59■■■□□ 2.01
CDR2-202ENST00000561630 ARHGEF16Q5VV41 709 aa27.59■■■□□ 2.01
CDR2-202ENST00000561630 SRBD1Q8N5C6 995 aaKnown RBP27.59■■■□□ 2.01
CDR2-202ENST00000561630 VTI1AQ96AJ9 217 aa27.59■■■□□ 2.01
CDR2-202ENST00000561630 RRP36Q96EU6 259 aaKnown RBP27.59■■■□□ 2.01
CDR2-202ENST00000561630 LBHD1Q9BQE6 289 aaPredicted RBP27.59■■■□□ 2.01
CDR2-202ENST00000561630 PRDM5Q9NQX1 630 aaPredicted RBP27.59■■■□□ 2.01
CDR2-202ENST00000561630 PXMP2Q9NR77 195 aa27.59■■■□□ 2.01
CDR2-202ENST00000561630 NKRFO15226 690 aaKnown RBP eCLIP27.58■■■□□ 2.01
CDR2-202ENST00000561630 CABYRO75952 493 aa27.58■■■□□ 2.01
CDR2-202ENST00000561630 REC8O95072 547 aa27.58■■■□□ 2.01
CDR2-202ENST00000561630 HMGB1P09429 215 aaKnown RBP27.58■■■□□ 2.01
CDR2-202ENST00000561630 CLTBP09497 229 aa27.58■■■□□ 2.01
CDR2-202ENST00000561630 HSPA4P34932 840 aa27.58■■■□□ 2.01
CDR2-202ENST00000561630 CDK7P50613 346 aa27.58■■■□□ 2.01
CDR2-202ENST00000561630 STXBP2Q15833 593 aa27.58■■■□□ 2.01
CDR2-202ENST00000561630 CXCL17Q6UXB2 119 aa27.58■■■□□ 2.01
CDR2-202ENST00000561630 SH3RF1Q7Z6J0 888 aa27.58■■■□□ 2.01
CDR2-202ENST00000561630 FANCBQ8NB91 859 aa27.58■■■□□ 2.01
CDR2-202ENST00000561630 PIBF1Q8WXW3 757 aa27.58■■■□□ 2.01
CDR2-202ENST00000561630 UBE2OQ9C0C9 1292 aaKnown RBP27.58■■■□□ 2.01
CDR2-202ENST00000561630 A0A0U1RQG5 324 aaPredicted RBP27.57■■■□□ 2
CDR2-202ENST00000561630 TRIM43BA6NCK2 446 aa27.57■■■□□ 2
CDR2-202ENST00000561630 GCOM1H8Y6P7 765 aaPredicted RBP27.57■■■□□ 2
CDR2-202ENST00000561630 POLR2MP0CAP2 368 aa27.57■■■□□ 2
CDR2-202ENST00000561630 EIF2AK2P19525 551 aaKnown RBP27.57■■■□□ 2
CDR2-202ENST00000561630 HOXA13P31271 388 aaPredicted RBP27.57■■■□□ 2
CDR2-202ENST00000561630 TRIM43Q96BQ3 446 aaPredicted RBP27.57■■■□□ 2
CDR2-202ENST00000561630 TCEANC2Q96MN5 208 aa27.57■■■□□ 2
CDR2-202ENST00000561630 DCDC2CA8MYV0 355 aa27.56■■■□□ 2
CDR2-202ENST00000561630 ARVCFO00192 962 aa27.56■■■□□ 2
CDR2-202ENST00000561630 NR3C2P08235 984 aa27.56■■■□□ 2
CDR2-202ENST00000561630 TXNP10599 105 aaKnown RBP27.56■■■□□ 2
CDR2-202ENST00000561630 TTLL4Q14679 1199 aa27.56■■■□□ 2
CDR2-202ENST00000561630 APOA5Q6Q788 366 aa27.56■■■□□ 2
CDR2-202ENST00000561630 SYNE3Q6ZMZ3 975 aa27.56■■■□□ 2
CDR2-202ENST00000561630 MICU3Q86XE3 530 aa27.56■■■□□ 2
CDR2-202ENST00000561630 RAB11FIP4Q86YS3 637 aa27.56■■■□□ 2
CDR2-202ENST00000561630 SEC63Q9UGP8 760 aaKnown RBP27.56■■■□□ 2
CDR2-202ENST00000561630 MROH7Q68CQ1 1323 aa27.56■■■□□ 2
CDR2-202ENST00000561630 SZT2Q5T011 3432 aa27.55■■■□□ 2
CDR2-202ENST00000561630 EIF3JO75822 258 aaKnown RBP27.55■■■□□ 2
CDR2-202ENST00000561630 FAAP100Q0VG06 881 aa27.55■■■□□ 2
CDR2-202ENST00000561630 CCDC62Q6P9F0 684 aa27.55■■■□□ 2
CDR2-202ENST00000561630 TMTC3Q6ZXV5 915 aa27.55■■■□□ 2
CDR2-202ENST00000561630 TDHQ8IZJ6 230 aa27.55■■■□□ 2
CDR2-202ENST00000561630 CMTR1Q8N1G2 835 aaKnown RBP27.55■■■□□ 2
CDR2-202ENST00000561630 OR6J1Q8NGC5 347 aa27.55■■■□□ 2
CDR2-202ENST00000561630 PDCD2LQ9BRP1 358 aa27.55■■■□□ 2
CDR2-202ENST00000561630 SNX14Q9Y5W7 946 aa27.55■■■□□ 2
CDR2-202ENST00000561630 KIAA0355O15063 1070 aa27.54■■■□□ 2
CDR2-202ENST00000561630 ARIH2O95376 493 aa27.54■■■□□ 2
CDR2-202ENST00000561630 CPT1AP50416 773 aa27.54■■■□□ 2
CDR2-202ENST00000561630 SEPT14Q6ZU15 432 aa27.54■■■□□ 2
CDR2-202ENST00000561630 SLC43A3Q8NBI5 491 aa27.54■■■□□ 2
CDR2-202ENST00000561630 BAZ2BQ9UIF8 2168 aaKnown RBP27.54■■■□□ 2
CDR2-202ENST00000561630 BRPF3Q9ULD4 1205 aa27.54■■■□□ 2
CDR2-202ENST00000561630 EPB41L2O43491 1005 aaKnown RBP27.53■■■□□ 2
CDR2-202ENST00000561630 COPS5Q92905 334 aa27.53■■■□□ 2
CDR2-202ENST00000561630 TMEM39AQ9NV64 488 aa27.53■■■□□ 2
CDR2-202ENST00000561630 MYH6P13533 1939 aa27.53■■■□□ 2
CDR2-202ENST00000561630 BRDTQ58F21 947 aaPredicted RBP27.52■■■□□ 2
CDR2-202ENST00000561630 VSIG10LQ86VR7 867 aa27.52■■■□□ 2
CDR2-202ENST00000561630 BADQ92934 168 aa27.52■■■□□ 2
CDR2-202ENST00000561630 JAKMIP1Q96N16 626 aaKnown RBP27.52■■■□□ 2
CDR2-202ENST00000561630 SEZ6LQ9BYH1 1024 aa27.52■■■□□ 2
CDR2-202ENST00000561630 POLR3EQ9NVU0 708 aa27.52■■■□□ 2
CDR2-202ENST00000561630 GRIN2DO15399 1336 aa27.51■■□□□ 1.99
CDR2-202ENST00000561630 A6NJR5 290 aa27.51■■□□□ 1.99
CDR2-202ENST00000561630 ITGB8P26012 769 aa27.51■■□□□ 1.99
CDR2-202ENST00000561630 ITGA7Q13683 1181 aa27.51■■□□□ 1.99
CDR2-202ENST00000561630 PGM5Q15124 567 aa27.51■■□□□ 1.99
CDR2-202ENST00000561630 FCHSD1Q86WN1 690 aa27.51■■□□□ 1.99
CDR2-202ENST00000561630 FAM126BQ8IXS8 530 aa27.51■■□□□ 1.99
CDR2-202ENST00000561630 CCDC82Q8N4S0 544 aa27.51■■□□□ 1.99
CDR2-202ENST00000561630 RBM28Q9NW13 759 aaKnown RBP27.51■■□□□ 1.99
CDR2-202ENST00000561630 ZBTB43O43298 467 aa27.5■■□□□ 1.99
CDR2-202ENST00000561630 PURAQ00577 322 aaKnown RBP27.5■■□□□ 1.99
CDR2-202ENST00000561630 LY6KQ17RY6 165 aa27.5■■□□□ 1.99
CDR2-202ENST00000561630 TBX21Q9UL17 535 aa27.5■■□□□ 1.99
CDR2-202ENST00000561630 KLF18A0A0U1RQI7 1052 aa27.49■■□□□ 1.99
CDR2-202ENST00000561630 MYCLP12524 364 aaPredicted RBP27.49■■□□□ 1.99
CDR2-202ENST00000561630 CPA1P15085 419 aa27.49■■□□□ 1.99
CDR2-202ENST00000561630 RAG1P15918 1043 aa27.49■■□□□ 1.99
CDR2-202ENST00000561630 RCAN1P53805 252 aa27.49■■□□□ 1.99
CDR2-202ENST00000561630 IL31RAQ8NI17 732 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms