RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 AMPD2Q01433 879 aa5.31□□□□□ -1.56
HERC1-215ENST00000561436 CYP4F3Q08477 520 aa5.31□□□□□ -1.56
HERC1-215ENST00000561436 SCRN1Q12765 414 aa5.31□□□□□ -1.56
HERC1-215ENST00000561436 TCEA2Q15560 299 aa5.31□□□□□ -1.56
HERC1-215ENST00000561436 SF1Q15637 639 aaKnown RBP5.31□□□□□ -1.56
HERC1-215ENST00000561436 RNF187Q5TA31 235 aaPredicted RBP5.31□□□□□ -1.56
HERC1-215ENST00000561436 MBLAC2Q68D91 279 aa5.31□□□□□ -1.56
HERC1-215ENST00000561436 C16orf86Q6ZW13 317 aa5.31□□□□□ -1.56
HERC1-215ENST00000561436 ZNF227Q86WZ6 799 aa5.31□□□□□ -1.56
HERC1-215ENST00000561436 JAMLQ86YT9 394 aa5.31□□□□□ -1.56
HERC1-215ENST00000561436 NLGN1Q8N2Q7 840 aa5.31□□□□□ -1.56
HERC1-215ENST00000561436 ZBTB38Q8NAP3 1195 aaPredicted RBP5.31□□□□□ -1.56
HERC1-215ENST00000561436 BTN2A2Q8WVV5 523 aa5.31□□□□□ -1.56
HERC1-215ENST00000561436 RCC1LQ96I51 464 aaKnown RBP5.31□□□□□ -1.56
HERC1-215ENST00000561436 SLC38A3Q99624 504 aa5.31□□□□□ -1.56
HERC1-215ENST00000561436 TMEM260Q9NX78 707 aa5.31□□□□□ -1.56
HERC1-215ENST00000561436 CLEC1BQ9P126 229 aa5.31□□□□□ -1.56
HERC1-215ENST00000561436 PTCH2Q9Y6C5 1203 aa5.31□□□□□ -1.56
HERC1-215ENST00000561436 PLB1Q6P1J6 1458 aa5.31□□□□□ -1.56
HERC1-215ENST00000561436 ABCA5Q8WWZ7 1642 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 TNIKQ9UKE5 1360 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 ESYT3A0FGR9 886 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 OR14I1A6ND48 311 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 C2orf71A6NGG8 1288 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 WTIPA6NIX2 430 aaPredicted RBP5.3□□□□□ -1.56
HERC1-215ENST00000561436 PPP1R11O60927 126 aaPredicted RBP5.3□□□□□ -1.56
HERC1-215ENST00000561436 ITGAVP06756 1048 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 NOP2P46087 812 aaKnown RBP5.3□□□□□ -1.56
HERC1-215ENST00000561436 EPHB3P54753 998 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 CYP4F8P98187 520 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 GRB10Q13322 594 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 PKN1Q16512 942 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 PRSS53Q2L4Q9 553 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 PLEKHG4Q58EX7 1191 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 GALNT18Q6P9A2 607 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 ATG14Q6ZNE5 492 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 IRF2BP1Q8IU81 584 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 CCDC140Q96MF4 163 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 BCAS3Q9H6U6 928 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 GULP1Q9UBP9 304 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 EMC9Q9Y3B6 208 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 RWDD3Q9Y3V2 267 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 BACE2Q9Y5Z0 518 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 SHROOM2Q13796 1616 aa5.3□□□□□ -1.56
HERC1-215ENST00000561436 A0A1W2PQ27 194 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 A0A1W2PQ45 241 aaPredicted RBP5.29□□□□□ -1.56
HERC1-215ENST00000561436 A0A1W2PQ64 194 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 A0A1W2PQC6 194 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 A0A1W2PQD8 194 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 A0A1W2PQY0 241 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 NPIPB6E9PJ23 425 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 PLS3P13797 630 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 PNLIPP16233 465 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 ENDOUP21128 410 aaKnown RBP5.29□□□□□ -1.56
HERC1-215ENST00000561436 VIPR1P32241 457 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 GRIA2P42262 883 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 SEPHS1P49903 392 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 NCKAP1LP55160 1127 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 JAG1P78504 1218 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 SRSF3P84103 164 aaKnown RBP5.29□□□□□ -1.56
HERC1-215ENST00000561436 RBM10P98175 930 aaKnown RBP5.29□□□□□ -1.56
HERC1-215ENST00000561436 SNX17Q15036 470 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 RAB3GAP1Q15042 981 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 HLA-DQA1Q5Y7H0 255 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 EGFLAMQ63HQ2 1017 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 BICRALQ6AI39 1079 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 GTF2IRD2BQ6EKJ0 949 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 TMEM132EQ6IEE7 984 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 GTF2IRD2Q86UP8 949 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 JMYQ8N9B5 988 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 KCNN1Q92952 543 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 FEZ1Q99689 392 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 ZNF552Q9H707 407 aaPredicted RBP5.29□□□□□ -1.56
HERC1-215ENST00000561436 GCM1Q9NP62 436 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 BTG4Q9NY30 223 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 ACSL6Q9UKU0 697 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 PRKAB1Q9Y478 270 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 ADAMTS12P58397 1594 aa5.29□□□□□ -1.56
HERC1-215ENST00000561436 UHRF1BP1LA0JNW5 1464 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 A0A1W2PQU0 124 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 THBDP07204 575 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 FAM153BP0C7A2 387 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 FGFR1P11362 822 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 ECI1P42126 302 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 RAP1GAPP47736 663 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 PPP2R2AP63151 447 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 SUMO1P63165 101 aaKnown RBP5.28□□□□□ -1.56
HERC1-215ENST00000561436 INF2Q27J81 1249 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 RCSD1Q6JBY9 416 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 RPTNQ6XPR3 784 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 TMC6Q7Z403 805 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 CILP2Q8IUL8 1156 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 TRIM59Q8IWR1 403 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 SCUBE1Q8IWY4 988 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 FAM9AQ8IZU1 332 aaPredicted RBP5.28□□□□□ -1.56
HERC1-215ENST00000561436 MRGPRX3Q96LB0 322 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 TNFRSF12AQ9NP84 129 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 CRTAC1Q9NQ79 661 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 KLHL14Q9P2G3 628 aa5.28□□□□□ -1.56
HERC1-215ENST00000561436 TMEFF2Q9UIK5 374 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms