RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 HDAC8Q9BY41 377 aa5.61□□□□□ -1.51
LRRC28-222ENST00000561431 ATP13A1Q9HD20 1204 aa5.61□□□□□ -1.51
LRRC28-222ENST00000561431 MYO5CQ9NQX4 1742 aa5.61□□□□□ -1.51
LRRC28-222ENST00000561431 TCFL5Q9UL49 500 aa5.61□□□□□ -1.51
LRRC28-222ENST00000561431 ST14Q9Y5Y6 855 aa5.61□□□□□ -1.51
LRRC28-222ENST00000561431 PTCH2Q9Y6C5 1203 aa5.61□□□□□ -1.51
LRRC28-222ENST00000561431 PREX2Q70Z35 1606 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 ZMYM4Q5VZL5 1548 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 ARHGEF40Q8TER5 1519 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 ADGRL1O94910 1474 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 PHLDB1Q86UU1 1377 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 PLEKHD1A6NEE1 506 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 WASH4PA8MWX3 477 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 STXBP3O00186 592 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 TBX1O43435 398 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 APPP05067 770 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 GLI1P08151 1106 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 GSTM1P09488 218 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 SEPHS1P49903 392 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 ZP2Q05996 745 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 EGR3Q06889 387 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 GRB10Q13322 594 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 ZC3H12BQ5HYM0 836 aaKnown RBP5.6□□□□□ -1.51
LRRC28-222ENST00000561431 NSMFQ6X4W1 530 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 TMPRSS7Q7RTY8 843 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 NAT16Q8N8M0 369 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 IER2Q9BTL4 223 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 FOXP3Q9BZS1 431 aa5.6□□□□□ -1.51
LRRC28-222ENST00000561431 PLCH2O75038 1416 aa5.59□□□□□ -1.51
LRRC28-222ENST00000561431 AKNAQ7Z591 1439 aa5.59□□□□□ -1.51
LRRC28-222ENST00000561431 TRBV23-1A0A0A0MS06 115 aa5.59□□□□□ -1.51
LRRC28-222ENST00000561431 NFIBO00712 420 aa5.59□□□□□ -1.51
LRRC28-222ENST00000561431 PABPC1P11940 636 aaKnown RBP5.59□□□□□ -1.51
LRRC28-222ENST00000561431 VAV1P15498 845 aa5.59□□□□□ -1.51
LRRC28-222ENST00000561431 RPL10P27635 214 aaKnown RBP5.59□□□□□ -1.51
LRRC28-222ENST00000561431 HOXC12P31275 282 aa5.59□□□□□ -1.51
LRRC28-222ENST00000561431 L1CAMP32004 1257 aa5.59□□□□□ -1.51
LRRC28-222ENST00000561431 AFMP43652 599 aa5.59□□□□□ -1.51
LRRC28-222ENST00000561431 LONRF2Q1L5Z9 754 aa5.59□□□□□ -1.51
LRRC28-222ENST00000561431 TMEM67Q5HYA8 995 aa5.59□□□□□ -1.51
LRRC28-222ENST00000561431 YOD1Q5VVQ6 348 aaPredicted RBP5.59□□□□□ -1.51
LRRC28-222ENST00000561431 MPZL3Q6UWV2 235 aa5.59□□□□□ -1.51
LRRC28-222ENST00000561431 SCUBE1Q8IWY4 988 aa5.59□□□□□ -1.51
LRRC28-222ENST00000561431 NLGN1Q8N2Q7 840 aa5.59□□□□□ -1.51
LRRC28-222ENST00000561431 KCTD13Q8WZ19 329 aa5.59□□□□□ -1.51
LRRC28-222ENST00000561431 MRGPRX3Q96LB0 322 aa5.59□□□□□ -1.51
LRRC28-222ENST00000561431 CCDC140Q96MF4 163 aa5.59□□□□□ -1.51
LRRC28-222ENST00000561431 KANSL2Q9H9L4 492 aa5.59□□□□□ -1.51
LRRC28-222ENST00000561431 ARHGEF4Q9NR80 690 aa5.59□□□□□ -1.51
LRRC28-222ENST00000561431 SIGLEC1Q9BZZ2 1709 aa5.59□□□□□ -1.51
LRRC28-222ENST00000561431 POGZQ7Z3K3 1410 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 PITPNM2Q9BZ72 1349 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 CDC42BPAQ5VT25 1732 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 CDC42BPBQ9Y5S2 1711 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 C2orf71A6NGG8 1288 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 NPIPB6E9PJ23 425 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 ADCY3O60266 1144 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 ASMTLO95671 621 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 CPP00450 1065 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 SRFP11831 508 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 ENDOUP21128 410 aaKnown RBP5.58□□□□□ -1.52
LRRC28-222ENST00000561431 HSD3B2P26439 372 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 BMP8BP34820 402 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 GRIA2P42262 883 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 CTSKP43235 329 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 CTSWP56202 376 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 SCRN1Q12765 414 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 FAM209AQ5JX71 171 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 RNF111Q6ZNA4 994 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 C16orf86Q6ZW13 317 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 WAPLQ7Z5K2 1190 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 ZNF513Q8N8E2 541 aaPredicted RBP5.58□□□□□ -1.52
LRRC28-222ENST00000561431 DHRS4Q9BTZ2 278 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 NKX2-4Q9H2Z4 354 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 CYP26B1Q9NR63 512 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 PCDHA11Q9Y5I1 949 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 BACE2Q9Y5Z0 518 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 KDM5CP41229 1560 aa5.58□□□□□ -1.52
LRRC28-222ENST00000561431 DENND4BO75064 1496 aaPredicted RBP5.58□□□□□ -1.52
LRRC28-222ENST00000561431 CCDC163A0A0D9SF12 145 aa5.57□□□□□ -1.52
LRRC28-222ENST00000561431 RAPGEF3O95398 923 aa5.57□□□□□ -1.52
LRRC28-222ENST00000561431 FGFR1P11362 822 aa5.57□□□□□ -1.52
LRRC28-222ENST00000561431 IFNGR1P15260 489 aa5.57□□□□□ -1.52
LRRC28-222ENST00000561431 SUMO1P63165 101 aaKnown RBP5.57□□□□□ -1.52
LRRC28-222ENST00000561431 SQSTM1Q13501 440 aa5.57□□□□□ -1.52
LRRC28-222ENST00000561431 TCEA2Q15560 299 aa5.57□□□□□ -1.52
LRRC28-222ENST00000561431 USP53Q70EK8 1073 aa5.57□□□□□ -1.52
LRRC28-222ENST00000561431 USHBP1Q8N6Y0 703 aa5.57□□□□□ -1.52
LRRC28-222ENST00000561431 FBXO15Q8NCQ5 510 aaPredicted RBP5.57□□□□□ -1.52
LRRC28-222ENST00000561431 LINC00116Q8NCU8 138 aa5.57□□□□□ -1.52
LRRC28-222ENST00000561431 KIRREL1Q96J84 757 aa5.57□□□□□ -1.52
LRRC28-222ENST00000561431 FCRL3Q96P31 734 aaPredicted RBP5.57□□□□□ -1.52
LRRC28-222ENST00000561431 SEMA3GQ9NS98 782 aa5.57□□□□□ -1.52
LRRC28-222ENST00000561431 AP5S1Q9NUS5 200 aa5.57□□□□□ -1.52
LRRC28-222ENST00000561431 TMEM260Q9NX78 707 aa5.57□□□□□ -1.52
LRRC28-222ENST00000561431 MRPS23Q9Y3D9 190 aaKnown RBP5.57□□□□□ -1.52
LRRC28-222ENST00000561431 ABCC1P33527 1531 aa5.57□□□□□ -1.52
LRRC28-222ENST00000561431 ARHGAP5Q13017 1502 aa5.57□□□□□ -1.52
LRRC28-222ENST00000561431 ITSN2Q9NZM3 1697 aa5.56□□□□□ -1.52
LRRC28-222ENST00000561431 TIAM1Q13009 1591 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms