RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 AMNQ9BXJ7 453 aa18.57■□□□□ 0.56
LMX1B-204ENST00000561065 PPP1R12CQ9BZL4 782 aa18.57■□□□□ 0.56
LMX1B-204ENST00000561065 LY9Q9HBG7 655 aa18.57■□□□□ 0.56
LMX1B-204ENST00000561065 MTMR10Q9NXD2 777 aa18.57■□□□□ 0.56
LMX1B-204ENST00000561065 MRPL11Q9Y3B7 192 aaKnown RBP18.57■□□□□ 0.56
LMX1B-204ENST00000561065 ZBTB5O15062 677 aa18.56■□□□□ 0.56
LMX1B-204ENST00000561065 B4GALT4O60513 344 aa18.56■□□□□ 0.56
LMX1B-204ENST00000561065 HSD17B4P51659 736 aa18.56■□□□□ 0.56
LMX1B-204ENST00000561065 PURAQ00577 322 aaKnown RBP18.56■□□□□ 0.56
LMX1B-204ENST00000561065 TMEM67Q5HYA8 995 aa18.56■□□□□ 0.56
LMX1B-204ENST00000561065 CCDC62Q6P9F0 684 aa18.56■□□□□ 0.56
LMX1B-204ENST00000561065 HOMER1Q86YM7 354 aa18.56■□□□□ 0.56
LMX1B-204ENST00000561065 SCFD2Q8WU76 684 aa18.56■□□□□ 0.56
LMX1B-204ENST00000561065 PIGSQ96S52 555 aa18.56■□□□□ 0.56
LMX1B-204ENST00000561065 MAF1Q9H063 256 aa18.56■□□□□ 0.56
LMX1B-204ENST00000561065 RIOX1Q9H6W3 641 aa18.56■□□□□ 0.56
LMX1B-204ENST00000561065 MYH7BA7E2Y1 1941 aa18.55■□□□□ 0.56
LMX1B-204ENST00000561065 ERICH2A1L162 156 aa18.55■□□□□ 0.56
LMX1B-204ENST00000561065 SLC27A2O14975 620 aa18.55■□□□□ 0.56
LMX1B-204ENST00000561065 ZEB2O60315 1214 aa18.55■□□□□ 0.56
LMX1B-204ENST00000561065 CFBP00751 764 aa18.55■□□□□ 0.56
LMX1B-204ENST00000561065 EIF2AK2P19525 551 aaKnown RBP18.55■□□□□ 0.56
LMX1B-204ENST00000561065 SART3Q15020 963 aaKnown RBP18.55■□□□□ 0.56
LMX1B-204ENST00000561065 MFSD5Q6N075 450 aa18.55■□□□□ 0.56
LMX1B-204ENST00000561065 MCF2L2Q86YR7 1114 aa18.55■□□□□ 0.56
LMX1B-204ENST00000561065 PPP1R13LQ8WUF5 828 aa18.55■□□□□ 0.56
LMX1B-204ENST00000561065 RNPC3Q96LT9 517 aaKnown RBP18.55■□□□□ 0.56
LMX1B-204ENST00000561065 RMDN3Q96TC7 470 aa18.55■□□□□ 0.56
LMX1B-204ENST00000561065 MYL10Q9BUA6 226 aa18.55■□□□□ 0.56
LMX1B-204ENST00000561065 TRPV6Q9H1D0 765 aa18.55■□□□□ 0.56
LMX1B-204ENST00000561065 PXMP2Q9NR77 195 aa18.55■□□□□ 0.56
LMX1B-204ENST00000561065 SCN5AQ14524 2016 aa18.55■□□□□ 0.56
LMX1B-204ENST00000561065 GBF1Q92538 1859 aa18.55■□□□□ 0.56
LMX1B-204ENST00000561065 TLR3O15455 904 aaKnown RBP18.54■□□□□ 0.56
LMX1B-204ENST00000561065 MYL3P08590 195 aa18.54■□□□□ 0.56
LMX1B-204ENST00000561065 TXNP10599 105 aaKnown RBP18.54■□□□□ 0.56
LMX1B-204ENST00000561065 CSF2RAP15509 400 aa18.54■□□□□ 0.56
LMX1B-204ENST00000561065 CYP2C18P33260 490 aa18.54■□□□□ 0.56
LMX1B-204ENST00000561065 CPT1AP50416 773 aa18.54■□□□□ 0.56
LMX1B-204ENST00000561065 C16orf59Q7L2K0 433 aa18.54■□□□□ 0.56
LMX1B-204ENST00000561065 NSUN6Q8TEA1 469 aaKnown RBP18.54■□□□□ 0.56
LMX1B-204ENST00000561065 GUCD1Q96NT3 240 aa18.54■□□□□ 0.56
LMX1B-204ENST00000561065 MPHOSPH6Q99547 160 aaKnown RBP18.54■□□□□ 0.56
LMX1B-204ENST00000561065 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.54■□□□□ 0.56
LMX1B-204ENST00000561065 PCDHA1Q9Y5I3 950 aa18.54■□□□□ 0.56
LMX1B-204ENST00000561065 SH2B2O14492 632 aaPredicted RBP18.53■□□□□ 0.56
LMX1B-204ENST00000561065 NKRFO15226 690 aaKnown RBP eCLIP18.53■□□□□ 0.56
LMX1B-204ENST00000561065 PRC1O43663 620 aa18.53■□□□□ 0.56
LMX1B-204ENST00000561065 HOXA13P31271 388 aaPredicted RBP18.53■□□□□ 0.56
LMX1B-204ENST00000561065 TTLL4Q14679 1199 aa18.53■□□□□ 0.56
LMX1B-204ENST00000561065 NECTIN1Q15223 517 aa18.53■□□□□ 0.56
LMX1B-204ENST00000561065 CREB3L3Q68CJ9 461 aa18.53■□□□□ 0.56
LMX1B-204ENST00000561065 SEPT14Q6ZU15 432 aa18.53■□□□□ 0.56
LMX1B-204ENST00000561065 ZNF654Q8IZM8 581 aa18.53■□□□□ 0.56
LMX1B-204ENST00000561065 IL31RAQ8NI17 732 aa18.53■□□□□ 0.56
LMX1B-204ENST00000561065 FAM161BQ96MY7 647 aa18.53■□□□□ 0.56
LMX1B-204ENST00000561065 NOC4LQ9BVI4 516 aaKnown RBP18.53■□□□□ 0.56
LMX1B-204ENST00000561065 WNT8AQ9H1J5 351 aa18.53■□□□□ 0.56
LMX1B-204ENST00000561065 ALDH8A1Q9H2A2 487 aaPredicted RBP18.53■□□□□ 0.56
LMX1B-204ENST00000561065 POLR3EQ9NVU0 708 aa18.53■□□□□ 0.56
LMX1B-204ENST00000561065 DOCK5Q9H7D0 1870 aa18.53■□□□□ 0.56
LMX1B-204ENST00000561065 UNC80Q8N2C7 3258 aa18.53■□□□□ 0.56
LMX1B-204ENST00000561065 A6NJR5 290 aa18.52■□□□□ 0.56
LMX1B-204ENST00000561065 ARHGAP1Q07960 439 aa18.52■□□□□ 0.56
LMX1B-204ENST00000561065 LY6KQ17RY6 165 aa18.52■□□□□ 0.56
LMX1B-204ENST00000561065 RNF20Q5VTR2 975 aa18.52■□□□□ 0.56
LMX1B-204ENST00000561065 FAM109BQ6ICB4 259 aaPredicted RBP18.52■□□□□ 0.56
LMX1B-204ENST00000561065 CATIPQ7Z7H3 387 aa18.52■□□□□ 0.56
LMX1B-204ENST00000561065 IWS1Q96ST2 819 aa18.52■□□□□ 0.56
LMX1B-204ENST00000561065 HIPK3Q9H422 1215 aa18.52■□□□□ 0.56
LMX1B-204ENST00000561065 ANO2Q9NQ90 1003 aa18.52■□□□□ 0.56
LMX1B-204ENST00000561065 TRMT13Q9NUP7 481 aaKnown RBP18.52■□□□□ 0.56
LMX1B-204ENST00000561065 B4DLN1 442 aa18.51■□□□□ 0.55
LMX1B-204ENST00000561065 RGS20O76081 388 aa18.51■□□□□ 0.55
LMX1B-204ENST00000561065 DDAH1O94760 285 aa18.51■□□□□ 0.55
LMX1B-204ENST00000561065 ACRP10323 421 aa18.51■□□□□ 0.55
LMX1B-204ENST00000561065 MRPL12P52815 198 aaKnown RBP18.51■□□□□ 0.55
LMX1B-204ENST00000561065 SMAD3P84022 425 aaKnown RBP18.51■□□□□ 0.55
LMX1B-204ENST00000561065 STXBP2Q15833 593 aa18.51■□□□□ 0.55
LMX1B-204ENST00000561065 TMEM240Q5SV17 173 aa18.51■□□□□ 0.55
LMX1B-204ENST00000561065 ARHGEF16Q5VV41 709 aa18.51■□□□□ 0.55
LMX1B-204ENST00000561065 VWCEQ96DN2 955 aa18.51■□□□□ 0.55
LMX1B-204ENST00000561065 PDCD2LQ9BRP1 358 aa18.51■□□□□ 0.55
LMX1B-204ENST00000561065 MTG1Q9BT17 334 aaPredicted RBP18.51■□□□□ 0.55
LMX1B-204ENST00000561065 TTYH1Q9H313 450 aaPredicted RBP18.51■□□□□ 0.55
LMX1B-204ENST00000561065 PPP4R2Q9NY27 417 aa18.51■□□□□ 0.55
LMX1B-204ENST00000561065 PLEKHA8P1O95397 391 aa18.5■□□□□ 0.55
LMX1B-204ENST00000561065 NR3C2P08235 984 aa18.5■□□□□ 0.55
LMX1B-204ENST00000561065 MMP3P08254 477 aa18.5■□□□□ 0.55
LMX1B-204ENST00000561065 RXRAP19793 462 aa18.5■□□□□ 0.55
LMX1B-204ENST00000561065 PPIGQ13427 754 aaKnown RBP eCLIP18.5■□□□□ 0.55
LMX1B-204ENST00000561065 RASIP1Q5U651 963 aa18.5■□□□□ 0.55
LMX1B-204ENST00000561065 AFG1LQ8WV93 481 aa18.5■□□□□ 0.55
LMX1B-204ENST00000561065 PIBF1Q8WXW3 757 aa18.5■□□□□ 0.55
LMX1B-204ENST00000561065 LRRC2Q9BYS8 371 aa18.5■□□□□ 0.55
LMX1B-204ENST00000561065 STXBP5LQ9Y2K9 1186 aa18.5■□□□□ 0.55
LMX1B-204ENST00000561065 CHD9Q3L8U1 2897 aa18.5■□□□□ 0.55
LMX1B-204ENST00000561065 PNMA6FA0A0J9YX94 578 aa18.49■□□□□ 0.55
LMX1B-204ENST00000561065 CDC45O75419 566 aa18.49■□□□□ 0.55
LMX1B-204ENST00000561065 CYP2C9P11712 490 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms