RNA–Protein interactions for RNA: ENST00000560964.1

WHAMM-202, Transcript of WAS protein homolog associated with actin, golgi membranes and microtubules, humanhuman

TSL 2

Gene WHAMM, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WHAMM-202ENST00000560964 SMPD4Q9NXE4 827 aa7□□□□□ -1.29
WHAMM-202ENST00000560964 GULP1Q9UBP9 304 aa7□□□□□ -1.29
WHAMM-202ENST00000560964 CGGBP1Q9UFW8 167 aaPredicted RBP7□□□□□ -1.29
WHAMM-202ENST00000560964 DDX41Q9UJV9 622 aaKnown RBP7□□□□□ -1.29
WHAMM-202ENST00000560964 EPHX1P07099 455 aa6.99□□□□□ -1.29
WHAMM-202ENST00000560964 CCDC81Q6ZN84 652 aa6.99□□□□□ -1.29
WHAMM-202ENST00000560964 CPNE8Q86YQ8 564 aa6.99□□□□□ -1.29
WHAMM-202ENST00000560964 LINC00482Q8N8I6 264 aa6.99□□□□□ -1.29
WHAMM-202ENST00000560964 FGD4Q96M96 766 aa6.99□□□□□ -1.29
WHAMM-202ENST00000560964 KRTAP17-1Q9BYP8 105 aa6.99□□□□□ -1.29
WHAMM-202ENST00000560964 FBLN5Q9UBX5 448 aa6.99□□□□□ -1.29
WHAMM-202ENST00000560964 PPP1R11O60927 126 aaPredicted RBP6.98□□□□□ -1.29
WHAMM-202ENST00000560964 RACK1P63244 317 aaKnown RBP6.98□□□□□ -1.29
WHAMM-202ENST00000560964 ADAM17P78536 824 aa6.98□□□□□ -1.29
WHAMM-202ENST00000560964 KIAA2012Q0VF49 1180 aa6.98□□□□□ -1.29
WHAMM-202ENST00000560964 DCP2Q8IU60 420 aaKnown RBP6.98□□□□□ -1.29
WHAMM-202ENST00000560964 ZNF654Q8IZM8 581 aa6.98□□□□□ -1.29
WHAMM-202ENST00000560964 ADAMTS17Q8TE56 1095 aa6.98□□□□□ -1.29
WHAMM-202ENST00000560964 GINM1Q9NU53 330 aa6.98□□□□□ -1.29
WHAMM-202ENST00000560964 SUGT1Q9Y2Z0 365 aa6.98□□□□□ -1.29
WHAMM-202ENST00000560964 A0A1W2PQH9 124 aa6.97□□□□□ -1.29
WHAMM-202ENST00000560964 C7orf72A4D263 438 aa6.97□□□□□ -1.29
WHAMM-202ENST00000560964 SOX9P48436 509 aa6.97□□□□□ -1.29
WHAMM-202ENST00000560964 GIPRP48546 466 aa6.97□□□□□ -1.29
WHAMM-202ENST00000560964 FAM124AQ86V42 546 aa6.97□□□□□ -1.29
WHAMM-202ENST00000560964 TTC9BQ8N6N2 239 aa6.97□□□□□ -1.29
WHAMM-202ENST00000560964 DDX11Q96FC9 970 aa6.97□□□□□ -1.29
WHAMM-202ENST00000560964 RBM15Q96T37 977 aaKnown RBP eCLIP6.97□□□□□ -1.29
WHAMM-202ENST00000560964 AP5M1Q9H0R1 490 aa6.97□□□□□ -1.29
WHAMM-202ENST00000560964 FUCA1P04066 466 aa6.96□□□□□ -1.3
WHAMM-202ENST00000560964 NTRK1P04629 796 aa6.96□□□□□ -1.3
WHAMM-202ENST00000560964 RPL13P26373 211 aaKnown RBP6.96□□□□□ -1.3
WHAMM-202ENST00000560964 PAK2Q13177 524 aa6.96□□□□□ -1.3
WHAMM-202ENST00000560964 SMAD4Q13485 552 aaKnown RBP6.96□□□□□ -1.3
WHAMM-202ENST00000560964 ETV3LQ6ZN32 361 aa6.96□□□□□ -1.3
WHAMM-202ENST00000560964 CRACR2BQ8N4Y2 399 aaPredicted RBP6.96□□□□□ -1.3
WHAMM-202ENST00000560964 SAMD11Q96NU1 681 aa6.96□□□□□ -1.3
WHAMM-202ENST00000560964 PCDHB10Q9UN67 800 aa6.96□□□□□ -1.3
WHAMM-202ENST00000560964 EFR3BQ9Y2G0 817 aa6.96□□□□□ -1.3
WHAMM-202ENST00000560964 PLATP00750 562 aa6.95□□□□□ -1.3
WHAMM-202ENST00000560964 C8BP07358 591 aa6.95□□□□□ -1.3
WHAMM-202ENST00000560964 FAM26FQ5R3K3 315 aa6.95□□□□□ -1.3
WHAMM-202ENST00000560964 CPZQ66K79 652 aa6.95□□□□□ -1.3
WHAMM-202ENST00000560964 BORAQ6PGQ7 559 aa6.95□□□□□ -1.3
WHAMM-202ENST00000560964 POMZP3Q6PJE2 187 aa6.95□□□□□ -1.3
WHAMM-202ENST00000560964 ZC3H18Q86VM9 953 aaKnown RBP6.95□□□□□ -1.3
WHAMM-202ENST00000560964 LGI4Q8N135 537 aa6.95□□□□□ -1.3
WHAMM-202ENST00000560964 TTLL6Q8N841 843 aa6.95□□□□□ -1.3
WHAMM-202ENST00000560964 KYQ8NBH2 561 aa6.95□□□□□ -1.3
WHAMM-202ENST00000560964 MMP19Q99542 508 aa6.95□□□□□ -1.3
WHAMM-202ENST00000560964 GORASP1Q9BQQ3 440 aa6.95□□□□□ -1.3
WHAMM-202ENST00000560964 C11orf84Q9BUA3 381 aaPredicted RBP6.95□□□□□ -1.3
WHAMM-202ENST00000560964 AKT3Q9Y243 479 aa6.95□□□□□ -1.3
WHAMM-202ENST00000560964 ANKRD34BA5PLL1 514 aa6.94□□□□□ -1.3
WHAMM-202ENST00000560964 THBS2P35442 1172 aa6.94□□□□□ -1.3
WHAMM-202ENST00000560964 RGL3Q3MIN7 710 aa6.94□□□□□ -1.3
WHAMM-202ENST00000560964 PLEKHO2Q8TD55 490 aa6.94□□□□□ -1.3
WHAMM-202ENST00000560964 KLHL6Q8WZ60 621 aa6.94□□□□□ -1.3
WHAMM-202ENST00000560964 LOXL4Q96JB6 756 aa6.94□□□□□ -1.3
WHAMM-202ENST00000560964 C1QTNF3-AMACRE9PGA6 284 aa6.93□□□□□ -1.3
WHAMM-202ENST00000560964 NAT2P11245 290 aa6.93□□□□□ -1.3
WHAMM-202ENST00000560964 PPP2R5EQ16537 467 aa6.93□□□□□ -1.3
WHAMM-202ENST00000560964 RASGRP4Q8TDF6 673 aa6.93□□□□□ -1.3
WHAMM-202ENST00000560964 SEC14L1Q92503 715 aa6.93□□□□□ -1.3
WHAMM-202ENST00000560964 COPS5Q92905 334 aa6.93□□□□□ -1.3
WHAMM-202ENST00000560964 GPRASP2Q96D09 838 aa6.93□□□□□ -1.3
WHAMM-202ENST00000560964 C1QTNF3Q9BXJ4 246 aa6.93□□□□□ -1.3
WHAMM-202ENST00000560964 NGRNQ9NPE2 291 aaKnown RBP6.93□□□□□ -1.3
WHAMM-202ENST00000560964 MARCH2Q9P0N8 246 aa6.93□□□□□ -1.3
WHAMM-202ENST00000560964 CLEC1BQ9P126 229 aa6.93□□□□□ -1.3
WHAMM-202ENST00000560964 SIT1Q9Y3P8 196 aa6.93□□□□□ -1.3
WHAMM-202ENST00000560964 MROH6A6NGR9 719 aa6.92□□□□□ -1.3
WHAMM-202ENST00000560964 SCAMP3O14828 347 aaKnown RBP6.92□□□□□ -1.3
WHAMM-202ENST00000560964 PLS3P13797 630 aa6.92□□□□□ -1.3
WHAMM-202ENST00000560964 TNFRSF1AP19438 455 aa6.92□□□□□ -1.3
WHAMM-202ENST00000560964 CASP7P55210 303 aa6.92□□□□□ -1.3
WHAMM-202ENST00000560964 TBC1D10BQ4KMP7 808 aaPredicted RBP6.92□□□□□ -1.3
WHAMM-202ENST00000560964 KIAA1211LQ6NV74 962 aa6.92□□□□□ -1.3
WHAMM-202ENST00000560964 CD300LDQ6UXZ3 194 aa6.92□□□□□ -1.3
WHAMM-202ENST00000560964 MIB1Q86YT6 1006 aa6.92□□□□□ -1.3
WHAMM-202ENST00000560964 APBA2Q99767 749 aa6.92□□□□□ -1.3
WHAMM-202ENST00000560964 EMC9Q9Y3B6 208 aa6.92□□□□□ -1.3
WHAMM-202ENST00000560964 NOP56O00567 594 aaKnown RBP6.91□□□□□ -1.3
WHAMM-202ENST00000560964 KCNH1O95259 989 aa6.91□□□□□ -1.3
WHAMM-202ENST00000560964 SLC6A11P48066 632 aa6.91□□□□□ -1.3
WHAMM-202ENST00000560964 ZNF143P52747 638 aaPredicted RBP6.91□□□□□ -1.3
WHAMM-202ENST00000560964 ZXDAP98168 799 aa6.91□□□□□ -1.3
WHAMM-202ENST00000560964 SCRN1Q12765 414 aa6.91□□□□□ -1.3
WHAMM-202ENST00000560964 VHLLQ6RSH7 139 aa6.91□□□□□ -1.3
WHAMM-202ENST00000560964 BVESQ8NE79 360 aa6.91□□□□□ -1.3
WHAMM-202ENST00000560964 CHST13Q8NET6 341 aa6.91□□□□□ -1.3
WHAMM-202ENST00000560964 C22orf46C9J442 243 aa6.9□□□□□ -1.3
WHAMM-202ENST00000560964 SGSM2O43147 1006 aa6.9□□□□□ -1.3
WHAMM-202ENST00000560964 SURF1Q15526 300 aa6.9□□□□□ -1.3
WHAMM-202ENST00000560964 IQCEQ6IPM2 695 aa6.9□□□□□ -1.3
WHAMM-202ENST00000560964 ZNF513Q8N8E2 541 aaPredicted RBP6.9□□□□□ -1.3
WHAMM-202ENST00000560964 CPLX3Q8WVH0 158 aa6.9□□□□□ -1.3
WHAMM-202ENST00000560964 C8orf49Q96NF6 230 aa6.9□□□□□ -1.3
WHAMM-202ENST00000560964 GPRC5CQ9NQ84 441 aa6.9□□□□□ -1.3
WHAMM-202ENST00000560964 INVSQ9Y283 1065 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms