RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 GJA10Q969M2 543 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 PBKQ96KB5 322 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 ESYT2A0FGR8 921 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 GTF2IP78347 998 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 SLMAPQ14BN4 828 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 KCTD16Q68DU8 428 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 RASEFQ8IZ41 740 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 NME8Q8N427 588 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 METTL13Q8N6R0 699 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 LARP4BQ92615 738 aaKnown RBP14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 P2RX5Q93086 422 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 KLHL29Q96CT2 875 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 SPATS2LQ9NUQ6 558 aaKnown RBP14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 PYCARDQ9ULZ3 195 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 CLIC4Q9Y696 253 aa14.37□□□□□ -0.11
CSPG4P11-201ENST00000560634 NCKAP5LQ9HCH0 1330 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 SYCP2Q9BX26 1530 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 DTNBO60941 627 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 SRGAP2BP0DMP2 458 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 ALAS1P13196 640 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 PSMC2P35998 433 aaKnown RBP14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 IFNAR2P48551 515 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 DCAF15Q66K64 600 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 ZBTB38Q8NAP3 1195 aaPredicted RBP14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 ACTR5Q9H9F9 607 aaPredicted RBP14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 RRP15Q9Y3B9 282 aaKnown RBP14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 ABCD1P33897 745 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 ECE1P42892 770 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 KPNA2P52292 529 aaKnown RBP14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 MYL7Q01449 175 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 RAB44Q7Z6P3 723 aaPredicted RBP14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 JPH2Q9BR39 696 aaPredicted RBP14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 OSBPL3Q9H4L5 887 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 EPB41L5Q9HCM4 733 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 SPDYE16A6NNV3 312 aaPredicted RBP14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 NR2F2P24468 414 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 SPDYE2Q495Y8 402 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 NAA35Q5VZE5 725 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 BANK1Q8NDB2 785 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 DACT3Q96B18 629 aaPredicted RBP14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 CERKLQ49MI3 558 aaPredicted RBP14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 LRCH2Q5VUJ6 765 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 CMTR1Q8N1G2 835 aaKnown RBP14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 POMGNT1Q8WZA1 660 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 AMNQ9BXJ7 453 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 RCOR1Q9UKL0 485 aa14.36□□□□□ -0.11
CSPG4P11-201ENST00000560634 BLMP54132 1417 aaPredicted RBP14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 SLFN14P0C7P3 912 aa14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 EIF3BP55884 814 aaKnown RBP14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 SCRN1Q12765 414 aa14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 PDCD2Q16342 344 aaPredicted RBP14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 ALS2CLQ60I27 953 aa14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 ENOX1Q8TC92 643 aaKnown RBP14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 SMCR8Q8TEV9 937 aaPredicted RBP14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 WHAMMQ8TF30 809 aa14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 SPDL1Q96EA4 605 aa14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 TXLNGQ9NUQ3 528 aa14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 PCDHA1Q9Y5I3 950 aa14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 ECEL1O95672 775 aa14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 AFPP02771 609 aaKnown RBP14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 INPP1P49441 399 aa14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 PHEXP78562 749 aa14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 ICA1Q05084 483 aa14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 ITKQ08881 620 aa14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 SLFN13Q68D06 897 aa14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 hCG_1984214I3L0E3 225 aa14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 PABPC4Q13310 644 aaKnown RBP eCLIP14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 TCP11X2Q5H9J9 407 aa14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 ZNF713Q8N859 430 aaPredicted RBP14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 PDCD7Q8N8D1 485 aaKnown RBP14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 LSG1Q9H089 658 aaKnown RBP14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 MID2Q9UJV3 735 aa14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 CSADQ9Y600 493 aa14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 ABCC12Q96J65 1359 aa14.35□□□□□ -0.11
CSPG4P11-201ENST00000560634 CTNND1O60716 968 aaKnown RBP14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 ZBED6P86452 979 aa14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 KAZNQ674X7 775 aa14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 ATP6V0A1Q93050 837 aa14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 MRPL47Q9HD33 250 aaKnown RBP14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 ANAPC5Q9UJX4 755 aa14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 KIAA1024Q9UPX6 916 aa14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 TCOF1Q13428 1488 aaKnown RBP14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 PALM3A6NDB9 673 aaPredicted RBP14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 SEMA3EO15041 775 aa14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 MSH2P43246 934 aa14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 POLGP54098 1239 aaPredicted RBP14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 TFDP1Q14186 410 aa14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 FAM160B1Q5W0V3 765 aa14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 S100BP04271 92 aaPredicted RBP14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 SKIP12755 728 aa14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 MAPK4P31152 587 aa14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 PTPROQ16827 1216 aa14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 ASPRV1Q53RT3 343 aa14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 SDR42E1Q8WUS8 393 aa14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 GPKOWQ92917 476 aaPredicted RBP eCLIP14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 CCDC124Q96CT7 223 aaKnown RBP14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 SEPT10Q9P0V9 454 aa14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 TPX2Q9ULW0 747 aaKnown RBP14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 PLEKHG3A1L390 1219 aa14.34□□□□□ -0.11
CSPG4P11-201ENST00000560634 LRRIQ4A6NIV6 560 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms