RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 DUSP28Q4G0W2 176 aa13.5□□□□□ -0.25
RABGGTA-216ENST00000560243 C1orf53Q5VUE5 145 aa13.5□□□□□ -0.25
RABGGTA-216ENST00000560243 CXCL17Q6UXB2 119 aa13.5□□□□□ -0.25
RABGGTA-216ENST00000560243 MICU3Q86XE3 530 aa13.5□□□□□ -0.25
RABGGTA-216ENST00000560243 CCDC82Q8N4S0 544 aa13.5□□□□□ -0.25
RABGGTA-216ENST00000560243 NSUN6Q8TEA1 469 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-216ENST00000560243 COPS5Q92905 334 aa13.5□□□□□ -0.25
RABGGTA-216ENST00000560243 AP5M1Q9H0R1 490 aa13.5□□□□□ -0.25
RABGGTA-216ENST00000560243 PRDM5Q9NQX1 630 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-216ENST00000560243 STARD7Q9NQZ5 370 aa13.5□□□□□ -0.25
RABGGTA-216ENST00000560243 PDLIM7Q9NR12 457 aa13.5□□□□□ -0.25
RABGGTA-216ENST00000560243 KIAA1217Q5T5P2 1943 aa13.5□□□□□ -0.25
RABGGTA-216ENST00000560243 TRIM43BA6NCK2 446 aa13.49□□□□□ -0.25
RABGGTA-216ENST00000560243 KRT32Q14532 448 aa13.49□□□□□ -0.25
RABGGTA-216ENST00000560243 ARHGEF16Q5VV41 709 aa13.49□□□□□ -0.25
RABGGTA-216ENST00000560243 APOA5Q6Q788 366 aa13.49□□□□□ -0.25
RABGGTA-216ENST00000560243 FANCBQ8NB91 859 aa13.49□□□□□ -0.25
RABGGTA-216ENST00000560243 PCSK9Q8NBP7 692 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-216ENST00000560243 IL31RAQ8NI17 732 aa13.49□□□□□ -0.25
RABGGTA-216ENST00000560243 VTI1AQ96AJ9 217 aa13.49□□□□□ -0.25
RABGGTA-216ENST00000560243 TRIM43Q96BQ3 446 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-216ENST00000560243 RRP36Q96EU6 259 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-216ENST00000560243 JAKMIP1Q96N16 626 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-216ENST00000560243 MAF1Q9H063 256 aa13.49□□□□□ -0.25
RABGGTA-216ENST00000560243 PXMP2Q9NR77 195 aa13.49□□□□□ -0.25
RABGGTA-216ENST00000560243 GRIN2DO15399 1336 aa13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 REC8O95072 547 aa13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 NR3C2P08235 984 aa13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 CALM1P0DP23 149 aa13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 CALM2P0DP24 149 aa13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 CALM3P0DP25 149 aa13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 ITGB8P26012 769 aa13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 SMARCA1P28370 1054 aa13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 GNAQP50148 359 aa13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 CDK7P50613 346 aa13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 CCDC62Q6P9F0 684 aa13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 SEPT14Q6ZU15 432 aa13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 TMTC3Q6ZXV5 915 aa13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 FCHSD1Q86WN1 690 aa13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 SCFD2Q8WU76 684 aa13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 ZFP91Q96JP5 570 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 GLT1D1Q96MS3 346 aa13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 IWS1Q96ST2 819 aa13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 MPHOSPH6Q99547 160 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 LZTS2Q9BRK4 669 aa13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 Q9Y3F1 56 aa13.48□□□□□ -0.25
RABGGTA-216ENST00000560243 ELP1O95163 1332 aa13.47□□□□□ -0.25
RABGGTA-216ENST00000560243 GCOM1H8Y6P7 765 aaPredicted RBP13.47□□□□□ -0.25
RABGGTA-216ENST00000560243 POLR2MP0CAP2 368 aa13.47□□□□□ -0.25
RABGGTA-216ENST00000560243 TXNP10599 105 aaKnown RBP13.47□□□□□ -0.25
RABGGTA-216ENST00000560243 BMP8BP34820 402 aa13.47□□□□□ -0.25
RABGGTA-216ENST00000560243 PSMC6P62333 389 aa13.47□□□□□ -0.25
RABGGTA-216ENST00000560243 FAAP100Q0VG06 881 aa13.47□□□□□ -0.25
RABGGTA-216ENST00000560243 PPP2R5BQ15173 497 aa13.47□□□□□ -0.25
RABGGTA-216ENST00000560243 STXBP2Q15833 593 aa13.47□□□□□ -0.25
RABGGTA-216ENST00000560243 ANKRD33Q7Z3H0 272 aa13.47□□□□□ -0.25
RABGGTA-216ENST00000560243 OR6J1Q8NGC5 347 aa13.47□□□□□ -0.25
RABGGTA-216ENST00000560243 PDCD2LQ9BRP1 358 aa13.47□□□□□ -0.25
RABGGTA-216ENST00000560243 UBE2OQ9C0C9 1292 aaKnown RBP13.47□□□□□ -0.25
RABGGTA-216ENST00000560243 KLF18A0A0U1RQI7 1052 aa13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 B4DLN1 442 aa13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 ARVCFO00192 962 aa13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 SOX1O00570 391 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 ZBTB43O43298 467 aa13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 RGS20O76081 388 aa13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 SLC34A2O95436 690 aa13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 HMGB1P09429 215 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 CLTBP09497 229 aa13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 MYCLP12524 364 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 MRPL12P52815 198 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 APOBRQ0VD83 1088 aa13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 FUT2Q10981 343 aa13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 TRAF1Q13077 416 aa13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 PGM5Q15124 567 aa13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 LY6KQ17RY6 165 aa13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 USP17L6PQ6QN14 398 aa13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 SYNE3Q6ZMZ3 975 aa13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 Q6ZUG5 572 aa13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 PPP1R13LQ8WUF5 828 aa13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 BADQ92934 168 aa13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 LBHD1Q9BQE6 289 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 USP26Q9BXU7 913 aa13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 FAM217BQ9NTX9 383 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 MAP3K20Q9NYL2 800 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 PRKAG2Q9UGJ0 569 aa13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 SEC63Q9UGP8 760 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-216ENST00000560243 CNTNAP5Q8WYK1 1306 aa13.45□□□□□ -0.26
RABGGTA-216ENST00000560243 MYH7BA7E2Y1 1941 aa13.45□□□□□ -0.26
RABGGTA-216ENST00000560243 A0A0U1RQG5 324 aaPredicted RBP13.45□□□□□ -0.26
RABGGTA-216ENST00000560243 KIAA0355O15063 1070 aa13.45□□□□□ -0.26
RABGGTA-216ENST00000560243 EIF3JO75822 258 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-216ENST00000560243 MYL3P08590 195 aa13.45□□□□□ -0.26
RABGGTA-216ENST00000560243 RPS6KB1P23443 525 aa13.45□□□□□ -0.26
RABGGTA-216ENST00000560243 CDC27P30260 824 aa13.45□□□□□ -0.26
RABGGTA-216ENST00000560243 ARHGAP1Q07960 439 aa13.45□□□□□ -0.26
RABGGTA-216ENST00000560243 TTLL4Q14679 1199 aa13.45□□□□□ -0.26
RABGGTA-216ENST00000560243 RTN1Q16799 776 aa13.45□□□□□ -0.26
RABGGTA-216ENST00000560243 BLOC1S2Q6QNY1 142 aa13.45□□□□□ -0.26
RABGGTA-216ENST00000560243 VSIG10LQ86VR7 867 aa13.45□□□□□ -0.26
RABGGTA-216ENST00000560243 SLC43A3Q8NBI5 491 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms