RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 SIK1P57059 783 aa21.12■□□□□ 0.97
SEMA4B-215ENST00000560089 ITPK1Q13572 414 aa21.12■□□□□ 0.97
SEMA4B-215ENST00000560089 TRIM14Q14142 442 aa21.12■□□□□ 0.97
SEMA4B-215ENST00000560089 APLFQ8IW19 511 aaPredicted RBP21.12■□□□□ 0.97
SEMA4B-215ENST00000560089 CCDC197Q8NCU1 140 aa21.12■□□□□ 0.97
SEMA4B-215ENST00000560089 IFT81Q8WYA0 676 aa21.12■□□□□ 0.97
SEMA4B-215ENST00000560089 GPR75-ASB3A0A0A6YYF3 556 aa21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 MAFGO15525 162 aa21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 ATP2A2P16615 1042 aaKnown RBP21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 CARSP49589 748 aaKnown RBP21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 HLFQ16534 295 aa21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 CDC37Q16543 378 aaPredicted RBP21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 CDKAL1Q5VV42 579 aa21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 ELOA2Q8IYF1 753 aaPredicted RBP21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 SYCP3Q8IZU3 236 aa21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 CNBD1Q8NA66 436 aa21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 PCMTD2Q9NV79 361 aa21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 ANKIB1Q9P2G1 1089 aa21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 SNX12Q9UMY4 172 aa21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 PLAAQ9Y263 795 aa21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 ASB3Q9Y575 518 aa21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 CD151P48509 253 aa21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 KRT83P78385 493 aa21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 ODF2Q5BJF6 829 aa21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 MAEAQ7L5Y9 396 aa21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 PRCCQ92733 491 aaPredicted RBP21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 ARFGEF2Q9Y6D5 1785 aa21.11■□□□□ 0.97
SEMA4B-215ENST00000560089 MACROD2A1Z1Q3 448 aa21.1■□□□□ 0.97
SEMA4B-215ENST00000560089 POLE2P56282 527 aa21.1■□□□□ 0.97
SEMA4B-215ENST00000560089 DYNC1I2Q13409 638 aaKnown RBP21.1■□□□□ 0.97
SEMA4B-215ENST00000560089 ARMCX6Q7L4S7 300 aa21.1■□□□□ 0.97
SEMA4B-215ENST00000560089 ZNF572Q7Z3I7 529 aaPredicted RBP21.1■□□□□ 0.97
SEMA4B-215ENST00000560089 ANKS4BQ8N8V4 417 aa21.1■□□□□ 0.97
SEMA4B-215ENST00000560089 UBE2OQ9C0C9 1292 aaKnown RBP21.1■□□□□ 0.97
SEMA4B-215ENST00000560089 QTRT2Q9H974 415 aaKnown RBP21.1■□□□□ 0.97
SEMA4B-215ENST00000560089 SERTAD1Q9UHV2 236 aa21.1■□□□□ 0.97
SEMA4B-215ENST00000560089 PALLDQ8WX93 1383 aa21.1■□□□□ 0.97
SEMA4B-215ENST00000560089 GCOM1H8Y6P7 765 aaPredicted RBP21.1■□□□□ 0.97
SEMA4B-215ENST00000560089 MYZAPP0CAP1 466 aa21.1■□□□□ 0.97
SEMA4B-215ENST00000560089 TUBP50607 506 aa21.1■□□□□ 0.97
SEMA4B-215ENST00000560089 MREGQ8N565 214 aa21.1■□□□□ 0.97
SEMA4B-215ENST00000560089 ATP6V1G1O75348 118 aa21.1■□□□□ 0.97
SEMA4B-215ENST00000560089 MRPS35P82673 323 aaKnown RBP21.1■□□□□ 0.97
SEMA4B-215ENST00000560089 MAF1Q9H063 256 aa21.1■□□□□ 0.97
SEMA4B-215ENST00000560089 IFIT3O14879 490 aaKnown RBP21.09■□□□□ 0.97
SEMA4B-215ENST00000560089 DRD4P21917 467 aa21.09■□□□□ 0.97
SEMA4B-215ENST00000560089 IFI16Q16666 785 aaKnown RBP21.09■□□□□ 0.97
SEMA4B-215ENST00000560089 FAM133BQ5BKY9 247 aaKnown RBP21.09■□□□□ 0.97
SEMA4B-215ENST00000560089 MIPOL1Q8TD10 442 aa21.09■□□□□ 0.97
SEMA4B-215ENST00000560089 LACRTQ9GZZ8 138 aa21.09■□□□□ 0.97
SEMA4B-215ENST00000560089 ARHGEF10LQ9HCE6 1279 aa21.09■□□□□ 0.97
SEMA4B-215ENST00000560089 SMARCAL1Q9NZC9 954 aa21.09■□□□□ 0.97
SEMA4B-215ENST00000560089 SH3TC1Q8TE82 1336 aa21.09■□□□□ 0.97
SEMA4B-215ENST00000560089 M0R2C6 588 aa21.09■□□□□ 0.97
SEMA4B-215ENST00000560089 PDLIM1O00151 329 aa21.09■□□□□ 0.97
SEMA4B-215ENST00000560089 POLR2DO15514 142 aaKnown RBP21.09■□□□□ 0.97
SEMA4B-215ENST00000560089 NQO1P15559 274 aaKnown RBP21.09■□□□□ 0.97
SEMA4B-215ENST00000560089 MYBPC3Q14896 1274 aa21.09■□□□□ 0.97
SEMA4B-215ENST00000560089 ANO7Q6IWH7 933 aa21.09■□□□□ 0.97
SEMA4B-215ENST00000560089 LMNTD2Q8IXW0 634 aa21.09■□□□□ 0.97
SEMA4B-215ENST00000560089 KCNV2Q8TDN2 545 aa21.09■□□□□ 0.97
SEMA4B-215ENST00000560089 VPS16Q9H269 839 aa21.09■□□□□ 0.97
SEMA4B-215ENST00000560089 KCNMB3Q9NPA1 279 aa21.09■□□□□ 0.97
SEMA4B-215ENST00000560089 LAMA4Q16363 1823 aa21.08■□□□□ 0.97
SEMA4B-215ENST00000560089 SEMA3EO15041 775 aa21.08■□□□□ 0.97
SEMA4B-215ENST00000560089 VIMP08670 466 aaKnown RBP21.08■□□□□ 0.97
SEMA4B-215ENST00000560089 ALDH5A1P51649 535 aaPredicted RBP21.08■□□□□ 0.97
SEMA4B-215ENST00000560089 SEPT12Q8IYM1 358 aa21.08■□□□□ 0.97
SEMA4B-215ENST00000560089 SYNE4Q8N205 404 aa21.08■□□□□ 0.97
SEMA4B-215ENST00000560089 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.08■□□□□ 0.97
SEMA4B-215ENST00000560089 ESYT3A0FGR9 886 aa21.08■□□□□ 0.96
SEMA4B-215ENST00000560089 MAGEA10P43363 369 aaPredicted RBP21.08■□□□□ 0.96
SEMA4B-215ENST00000560089 GNAQP50148 359 aa21.08■□□□□ 0.96
SEMA4B-215ENST00000560089 KCNJ2P63252 427 aa21.08■□□□□ 0.96
SEMA4B-215ENST00000560089 ADAM9Q13443 819 aa21.08■□□□□ 0.96
SEMA4B-215ENST00000560089 MOV10L1Q9BXT6 1211 aaKnown RBP21.08■□□□□ 0.96
SEMA4B-215ENST00000560089 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.08■□□□□ 0.96
SEMA4B-215ENST00000560089 ABLIM1O14639 778 aa21.07■□□□□ 0.96
SEMA4B-215ENST00000560089 CRKLP46109 303 aaKnown RBP21.07■□□□□ 0.96
SEMA4B-215ENST00000560089 TSR1Q2NL82 804 aaKnown RBP21.07■□□□□ 0.96
SEMA4B-215ENST00000560089 CCDC85AQ96PX6 553 aaPredicted RBP21.07■□□□□ 0.96
SEMA4B-215ENST00000560089 EPB41L5Q9HCM4 733 aa21.07■□□□□ 0.96
SEMA4B-215ENST00000560089 AFDNP55196 1824 aaKnown RBP21.07■□□□□ 0.96
SEMA4B-215ENST00000560089 RCCD1A6NED2 376 aa21.07■□□□□ 0.96
SEMA4B-215ENST00000560089 F8W031 263 aaPredicted RBP21.07■□□□□ 0.96
SEMA4B-215ENST00000560089 ORC4O43929 436 aa21.07■□□□□ 0.96
SEMA4B-215ENST00000560089 PPP2R2AP63151 447 aa21.07■□□□□ 0.96
SEMA4B-215ENST00000560089 SEPT2Q15019 361 aa21.07■□□□□ 0.96
SEMA4B-215ENST00000560089 KIF6Q6ZMV9 814 aa21.07■□□□□ 0.96
SEMA4B-215ENST00000560089 ZNF662Q6ZS27 426 aa21.07■□□□□ 0.96
SEMA4B-215ENST00000560089 MAIP1Q8WWC4 291 aa21.07■□□□□ 0.96
SEMA4B-215ENST00000560089 ANKRD27Q96NW4 1050 aa21.07■□□□□ 0.96
SEMA4B-215ENST00000560089 MAP3K14Q99558 947 aa21.07■□□□□ 0.96
SEMA4B-215ENST00000560089 YIPF2Q9BWQ6 316 aa21.07■□□□□ 0.96
SEMA4B-215ENST00000560089 DUSP10Q9Y6W6 482 aa21.07■□□□□ 0.96
SEMA4B-215ENST00000560089 CPLX1O14810 134 aa21.06■□□□□ 0.96
SEMA4B-215ENST00000560089 PAEPP09466 180 aa21.06■□□□□ 0.96
SEMA4B-215ENST00000560089 CCNG1P51959 295 aa21.06■□□□□ 0.96
SEMA4B-215ENST00000560089 SFSWAPQ12872 951 aaKnown RBP21.06■□□□□ 0.96
SEMA4B-215ENST00000560089 KRT31Q15323 416 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms