RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 NR5A1Q13285 461 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 PCGF5Q86SE9 256 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 CFAP36Q96G28 342 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 MDM2Q00987 491 aaPredicted RBP14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 NBPF20Q3BBV1 942 aa14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 BPIFB4P59827 614 aa14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 TRAF7Q6Q0C0 670 aa14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 NLRP9Q7RTR0 991 aa14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 RDH13Q8NBN7 331 aa14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 MAGOHBQ96A72 148 aaKnown RBP14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 MMTAG2Q9BU76 263 aaKnown RBP14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 PANK4Q9NVE7 773 aa14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 DRP2Q13474 957 aa14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 USH1GQ495M9 461 aa14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 MYOCDQ8IZQ8 938 aa14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 DISC1Q9NRI5 854 aa14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 IPO5O00410 1097 aaKnown RBP14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 VCAM1P19320 739 aa14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 SLFN12Q8IYM2 578 aa14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 FAM81BQ96LP2 452 aa14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 MBIPQ9NS73 344 aa14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 SLC38A10Q9HBR0 1119 aa14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 ANGEL1Q9UNK9 670 aaKnown RBP14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 DMTNQ08495 405 aa14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 IMPG1Q17R60 797 aa14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 ATG3Q9NT62 314 aa14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 HACD3Q9P035 362 aa14.98□□□□□ -0.01
CSPG4P12-202ENST00000559989 PLS3P13797 630 aa14.97□□□□□ -0.01
CSPG4P12-202ENST00000559989 DEPDC1Q5TB30 811 aa14.97□□□□□ -0.01
CSPG4P12-202ENST00000559989 ACAD11Q709F0 780 aa14.97□□□□□ -0.01
CSPG4P12-202ENST00000559989 LUZP2Q86TE4 346 aa14.97□□□□□ -0.01
CSPG4P12-202ENST00000559989 NDUFAF2Q8N183 169 aa14.97□□□□□ -0.01
CSPG4P12-202ENST00000559989 GDAP1Q8TB36 358 aa14.97□□□□□ -0.01
CSPG4P12-202ENST00000559989 ATP8B3O60423 1300 aa14.97□□□□□ -0.01
CSPG4P12-202ENST00000559989 CTNND1O60716 968 aaKnown RBP14.97□□□□□ -0.01
CSPG4P12-202ENST00000559989 GAS7O60861 476 aa14.97□□□□□ -0.01
CSPG4P12-202ENST00000559989 ATXN8OSP0DMR3 200 aa14.97□□□□□ -0.01
CSPG4P12-202ENST00000559989 ANKRD44Q8N8A2 993 aa14.97□□□□□ -0.01
CSPG4P12-202ENST00000559989 TMEM60Q9H2L4 133 aa14.97□□□□□ -0.01
CSPG4P12-202ENST00000559989 GYG2O15488 501 aa14.97□□□□□ -0.01
CSPG4P12-202ENST00000559989 AOC3Q16853 763 aa14.97□□□□□ -0.01
CSPG4P12-202ENST00000559989 PPP2R2CQ9Y2T4 447 aa14.97□□□□□ -0.01
CSPG4P12-202ENST00000559989 SYNJ2BP-COX16A0A087WUM0 186 aa14.97□□□□□ -0.01
CSPG4P12-202ENST00000559989 COX16Q9P0S2 106 aa14.97□□□□□ -0.01
CSPG4P12-202ENST00000559989 S100A5P33763 92 aa14.97□□□□□ -0.01
CSPG4P12-202ENST00000559989 FAM96AQ9H5X1 160 aa14.97□□□□□ -0.01
CSPG4P12-202ENST00000559989 GAPVD1Q14C86 1478 aa14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 RIMBP2O15034 1052 aa14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 ZSCAN9O15535 394 aaPredicted RBP14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 ANO5Q75V66 913 aa14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 KRT14P02533 472 aa14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 SLC17A8Q8NDX2 589 aa14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 XPOTO43592 962 aaKnown RBP14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 LZTS3O60299 673 aaPredicted RBP14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 KCNA1Q09470 495 aa14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 SGO2Q562F6 1265 aa14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 ARHGEF16Q5VV41 709 aa14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 ADCK1Q86TW2 530 aa14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 GPBP1Q86WP2 473 aa14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 ABCF3Q9NUQ8 709 aa14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 GEMIN8Q9NWZ8 242 aaKnown RBP14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 PCDHB4Q9Y5E5 795 aa14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 KIF1CO43896 1103 aaKnown RBP14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 GNPTABQ3T906 1256 aa14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 TPTE2Q6XPS3 522 aa14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.96□□□□□ -0.01
CSPG4P12-202ENST00000559989 TMEM191CA6NGB0 347 aa14.96□□□□□ -0.02
CSPG4P12-202ENST00000559989 TMEM191BP0C7N4 346 aa14.96□□□□□ -0.02
CSPG4P12-202ENST00000559989 TCP11X2Q5H9J9 407 aa14.96□□□□□ -0.02
CSPG4P12-202ENST00000559989 RGS9BPQ6ZS82 235 aa14.96□□□□□ -0.02
CSPG4P12-202ENST00000559989 BEGAINQ9BUH8 593 aa14.96□□□□□ -0.02
CSPG4P12-202ENST00000559989 B4E1Z4 1266 aa14.96□□□□□ -0.02
CSPG4P12-202ENST00000559989 K7ENM7 598 aa14.96□□□□□ -0.02
CSPG4P12-202ENST00000559989 HSPD1P10809 573 aaKnown RBP14.96□□□□□ -0.02
CSPG4P12-202ENST00000559989 PTK2Q05397 1052 aa14.96□□□□□ -0.02
CSPG4P12-202ENST00000559989 METTL23Q86XA0 190 aa14.96□□□□□ -0.02
CSPG4P12-202ENST00000559989 SYT2Q8N9I0 419 aaPredicted RBP14.96□□□□□ -0.02
CSPG4P12-202ENST00000559989 METTL14Q9HCE5 456 aaKnown RBP14.96□□□□□ -0.02
CSPG4P12-202ENST00000559989 MEIS1O00470 390 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 PJA2O43164 708 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 TAF1BQ53T94 588 aaPredicted RBP14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 CDC37L1Q7L3B6 337 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 NEK8Q86SG6 692 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 KCTD6Q8NC69 237 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 RABGGTAQ92696 567 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 PRG3Q9Y2Y8 225 aaPredicted RBP14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 SBNO1A3KN83 1393 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 DNAJC6O75061 913 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 CATSPER1Q8NEC5 780 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 ARMC2Q8NEN0 867 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 XAGE3Q8WTP9 111 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 ANKRD36BP1Q96IX9 119 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 DNAJC17Q9NVM6 304 aaKnown RBP14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 C4BPBP20851 252 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 ST13P50502 369 aaKnown RBP14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 EIF3BP55884 814 aaKnown RBP14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 AARS2Q5JTZ9 985 aaKnown RBP14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 DARS2Q6PI48 645 aaKnown RBP14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 LMBR1LQ6UX01 489 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 BTN2A2Q8WVV5 523 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms