RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 ELP1O95163 1332 aa12.69□□□□□ -0.38
SPG11-216ENST00000559347 PNMA6FA0A0J9YX94 578 aa12.69□□□□□ -0.38
SPG11-216ENST00000559347 B4DLN1 442 aa12.69□□□□□ -0.38
SPG11-216ENST00000559347 CALM1P0DP23 149 aa12.69□□□□□ -0.38
SPG11-216ENST00000559347 CALM2P0DP24 149 aa12.69□□□□□ -0.38
SPG11-216ENST00000559347 CALM3P0DP25 149 aa12.69□□□□□ -0.38
SPG11-216ENST00000559347 MRPL12P52815 198 aaKnown RBP12.69□□□□□ -0.38
SPG11-216ENST00000559347 EXOSC10Q01780 885 aaKnown RBP12.69□□□□□ -0.38
SPG11-216ENST00000559347 TRAF1Q13077 416 aa12.69□□□□□ -0.38
SPG11-216ENST00000559347 KRT32Q14532 448 aa12.69□□□□□ -0.38
SPG11-216ENST00000559347 PPP2R5BQ15173 497 aa12.69□□□□□ -0.38
SPG11-216ENST00000559347 FSCN1Q16658 493 aaKnown RBP12.69□□□□□ -0.38
SPG11-216ENST00000559347 GNASQ5JWF2 1037 aa12.69□□□□□ -0.38
SPG11-216ENST00000559347 NOL8Q76FK4 1167 aaKnown RBP12.69□□□□□ -0.38
SPG11-216ENST00000559347 NSUN6Q8TEA1 469 aaKnown RBP12.69□□□□□ -0.38
SPG11-216ENST00000559347 SCFD2Q8WU76 684 aa12.69□□□□□ -0.38
SPG11-216ENST00000559347 TCEANC2Q96MN5 208 aa12.69□□□□□ -0.38
SPG11-216ENST00000559347 GLT1D1Q96MS3 346 aa12.69□□□□□ -0.38
SPG11-216ENST00000559347 PRDM5Q9NQX1 630 aaPredicted RBP12.69□□□□□ -0.38
SPG11-216ENST00000559347 PXMP2Q9NR77 195 aa12.69□□□□□ -0.38
SPG11-216ENST00000559347 Q9Y3F1 56 aa12.69□□□□□ -0.38
SPG11-216ENST00000559347 SLC12A7Q9Y666 1083 aa12.69□□□□□ -0.38
SPG11-216ENST00000559347 PQBP1O60828 265 aaKnown RBP12.68□□□□□ -0.38
SPG11-216ENST00000559347 ARIH2O95376 493 aa12.68□□□□□ -0.38
SPG11-216ENST00000559347 CLTBP09497 229 aa12.68□□□□□ -0.38
SPG11-216ENST00000559347 EIF2AK2P19525 551 aaKnown RBP12.68□□□□□ -0.38
SPG11-216ENST00000559347 SMARCA1P28370 1054 aa12.68□□□□□ -0.38
SPG11-216ENST00000559347 HSPA4P34932 840 aa12.68□□□□□ -0.38
SPG11-216ENST00000559347 MDM2Q00987 491 aaPredicted RBP12.68□□□□□ -0.38
SPG11-216ENST00000559347 TLE2Q04725 743 aa12.68□□□□□ -0.38
SPG11-216ENST00000559347 APOA5Q6Q788 366 aa12.68□□□□□ -0.38
SPG11-216ENST00000559347 ANKRD33Q7Z3H0 272 aa12.68□□□□□ -0.38
SPG11-216ENST00000559347 MICU3Q86XE3 530 aa12.68□□□□□ -0.38
SPG11-216ENST00000559347 RAB11FIP4Q86YS3 637 aa12.68□□□□□ -0.38
SPG11-216ENST00000559347 SAMD3Q8N6K7 520 aa12.68□□□□□ -0.38
SPG11-216ENST00000559347 KCNB2Q92953 911 aa12.68□□□□□ -0.38
SPG11-216ENST00000559347 RRP36Q96EU6 259 aaKnown RBP12.68□□□□□ -0.38
SPG11-216ENST00000559347 RMDN3Q96TC7 470 aa12.68□□□□□ -0.38
SPG11-216ENST00000559347 WDR11Q9BZH6 1224 aa12.68□□□□□ -0.38
SPG11-216ENST00000559347 AP5M1Q9H0R1 490 aa12.68□□□□□ -0.38
SPG11-216ENST00000559347 MAP3K20Q9NYL2 800 aaKnown RBP12.68□□□□□ -0.38
SPG11-216ENST00000559347 PRKAG2Q9UGJ0 569 aa12.68□□□□□ -0.38
SPG11-216ENST00000559347 MROH7Q68CQ1 1323 aa12.67□□□□□ -0.38
SPG11-216ENST00000559347 CNTNAP5Q8WYK1 1306 aa12.67□□□□□ -0.38
SPG11-216ENST00000559347 A0A0U1RQG5 324 aaPredicted RBP12.67□□□□□ -0.38
SPG11-216ENST00000559347 TRIM43BA6NCK2 446 aa12.67□□□□□ -0.38
SPG11-216ENST00000559347 NKRFO15226 690 aaKnown RBP eCLIP12.67□□□□□ -0.38
SPG11-216ENST00000559347 DYNC1LI2O43237 492 aaPredicted RBP12.67□□□□□ -0.38
SPG11-216ENST00000559347 REC8O95072 547 aa12.67□□□□□ -0.38
SPG11-216ENST00000559347 HOXA13P31271 388 aaPredicted RBP12.67□□□□□ -0.38
SPG11-216ENST00000559347 GNAQP50148 359 aa12.67□□□□□ -0.38
SPG11-216ENST00000559347 ARHGEF16Q5VV41 709 aa12.67□□□□□ -0.38
SPG11-216ENST00000559347 CXCL17Q6UXB2 119 aa12.67□□□□□ -0.38
SPG11-216ENST00000559347 TMTC3Q6ZXV5 915 aa12.67□□□□□ -0.38
SPG11-216ENST00000559347 DHX32Q7L7V1 743 aaKnown RBP12.67□□□□□ -0.38
SPG11-216ENST00000559347 SH3RF1Q7Z6J0 888 aa12.67□□□□□ -0.38
SPG11-216ENST00000559347 CMTR1Q8N1G2 835 aaKnown RBP12.67□□□□□ -0.38
SPG11-216ENST00000559347 SRBD1Q8N5C6 995 aaKnown RBP12.67□□□□□ -0.38
SPG11-216ENST00000559347 PIBF1Q8WXW3 757 aa12.67□□□□□ -0.38
SPG11-216ENST00000559347 TRIM43Q96BQ3 446 aaPredicted RBP12.67□□□□□ -0.38
SPG11-216ENST00000559347 TOX2Q96NM4 488 aa12.67□□□□□ -0.38
SPG11-216ENST00000559347 IWS1Q96ST2 819 aa12.67□□□□□ -0.38
SPG11-216ENST00000559347 LZTS2Q9BRK4 669 aa12.67□□□□□ -0.38
SPG11-216ENST00000559347 SEC63Q9UGP8 760 aaKnown RBP12.67□□□□□ -0.38
SPG11-216ENST00000559347 SNX14Q9Y5W7 946 aa12.67□□□□□ -0.38
SPG11-216ENST00000559347 FRMPD4Q14CM0 1322 aa12.66□□□□□ -0.38
SPG11-216ENST00000559347 HMGB1P09429 215 aaKnown RBP12.66□□□□□ -0.38
SPG11-216ENST00000559347 TXNP10599 105 aaKnown RBP12.66□□□□□ -0.38
SPG11-216ENST00000559347 CPT1AP50416 773 aa12.66□□□□□ -0.38
SPG11-216ENST00000559347 CDK7P50613 346 aa12.66□□□□□ -0.38
SPG11-216ENST00000559347 FAAP100Q0VG06 881 aa12.66□□□□□ -0.38
SPG11-216ENST00000559347 TTLL4Q14679 1199 aa12.66□□□□□ -0.38
SPG11-216ENST00000559347 STXBP2Q15833 593 aa12.66□□□□□ -0.38
SPG11-216ENST00000559347 TDHQ8IZJ6 230 aa12.66□□□□□ -0.38
SPG11-216ENST00000559347 OR6J1Q8NGC5 347 aa12.66□□□□□ -0.38
SPG11-216ENST00000559347 COPS5Q92905 334 aa12.66□□□□□ -0.38
SPG11-216ENST00000559347 JAKMIP1Q96N16 626 aaKnown RBP12.66□□□□□ -0.38
SPG11-216ENST00000559347 PDCD2LQ9BRP1 358 aa12.66□□□□□ -0.38
SPG11-216ENST00000559347 UBE2OQ9C0C9 1292 aaKnown RBP12.66□□□□□ -0.38
SPG11-216ENST00000559347 BRPF3Q9ULD4 1205 aa12.66□□□□□ -0.38
SPG11-216ENST00000559347 NID2Q14112 1375 aa12.66□□□□□ -0.38
SPG11-216ENST00000559347 GCOM1H8Y6P7 765 aaPredicted RBP12.65□□□□□ -0.38
SPG11-216ENST00000559347 ARVCFO00192 962 aa12.65□□□□□ -0.38
SPG11-216ENST00000559347 KIAA0355O15063 1070 aa12.65□□□□□ -0.38
SPG11-216ENST00000559347 EPB41L2O43491 1005 aaKnown RBP12.65□□□□□ -0.38
SPG11-216ENST00000559347 ZEB2O60315 1214 aa12.65□□□□□ -0.38
SPG11-216ENST00000559347 CABYRO75952 493 aa12.65□□□□□ -0.38
SPG11-216ENST00000559347 NR3C2P08235 984 aa12.65□□□□□ -0.38
SPG11-216ENST00000559347 POLR2MP0CAP2 368 aa12.65□□□□□ -0.38
SPG11-216ENST00000559347 CPA1P15085 419 aa12.65□□□□□ -0.38
SPG11-216ENST00000559347 ITGB8P26012 769 aa12.65□□□□□ -0.38
SPG11-216ENST00000559347 PURAQ00577 322 aaKnown RBP12.65□□□□□ -0.38
SPG11-216ENST00000559347 PGM5Q15124 567 aa12.65□□□□□ -0.38
SPG11-216ENST00000559347 CCDC62Q6P9F0 684 aa12.65□□□□□ -0.38
SPG11-216ENST00000559347 FAM126BQ8IXS8 530 aa12.65□□□□□ -0.38
SPG11-216ENST00000559347 FANCBQ8NB91 859 aa12.65□□□□□ -0.38
SPG11-216ENST00000559347 SLC43A3Q8NBI5 491 aa12.65□□□□□ -0.38
SPG11-216ENST00000559347 IL31RAQ8NI17 732 aa12.65□□□□□ -0.38
SPG11-216ENST00000559347 LBHD1Q9BQE6 289 aaPredicted RBP12.65□□□□□ -0.38
SPG11-216ENST00000559347 TBX21Q9UL17 535 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms