RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 MYL3P08590 195 aa20.62■□□□□ 0.89
TPM1-218ENST00000559281 SUPT20HL2P0C7V6 817 aa20.62■□□□□ 0.89
TPM1-218ENST00000559281 EPHB4P54760 987 aa20.62■□□□□ 0.89
TPM1-218ENST00000559281 CASC1Q6TDU7 716 aa20.62■□□□□ 0.89
TPM1-218ENST00000559281 CHST3Q7LGC8 479 aa20.62■□□□□ 0.89
TPM1-218ENST00000559281 TMTC2Q8N394 836 aa20.62■□□□□ 0.89
TPM1-218ENST00000559281 MTG1Q9BT17 334 aaPredicted RBP20.62■□□□□ 0.89
TPM1-218ENST00000559281 PPP1R12CQ9BZL4 782 aa20.62■□□□□ 0.89
TPM1-218ENST00000559281 RIOX1Q9H6W3 641 aa20.62■□□□□ 0.89
TPM1-218ENST00000559281 STXBP5LQ9Y2K9 1186 aa20.62■□□□□ 0.89
TPM1-218ENST00000559281 GRIN2DO15399 1336 aa20.61■□□□□ 0.89
TPM1-218ENST00000559281 A6NJR5 290 aa20.61■□□□□ 0.89
TPM1-218ENST00000559281 EIF3JO75822 258 aaKnown RBP20.61■□□□□ 0.89
TPM1-218ENST00000559281 PSMC6P62333 389 aa20.61■□□□□ 0.89
TPM1-218ENST00000559281 PURAQ00577 322 aaKnown RBP20.61■□□□□ 0.89
TPM1-218ENST00000559281 TROAPQ12815 778 aa20.61■□□□□ 0.89
TPM1-218ENST00000559281 SEPT14Q6ZU15 432 aa20.61■□□□□ 0.89
TPM1-218ENST00000559281 STOX1Q6ZVD7 989 aa20.61■□□□□ 0.89
TPM1-218ENST00000559281 HOMER1Q86YM7 354 aa20.61■□□□□ 0.89
TPM1-218ENST00000559281 IGDCC4Q8TDY8 1250 aa20.61■□□□□ 0.89
TPM1-218ENST00000559281 ESYT1Q9BSJ8 1104 aa20.61■□□□□ 0.89
TPM1-218ENST00000559281 HIPK3Q9H422 1215 aa20.61■□□□□ 0.89
TPM1-218ENST00000559281 TAF6LQ9Y6J9 622 aa20.61■□□□□ 0.89
TPM1-218ENST00000559281 PNMA6FA0A0J9YX94 578 aa20.6■□□□□ 0.89
TPM1-218ENST00000559281 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.6■□□□□ 0.89
TPM1-218ENST00000559281 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.6■□□□□ 0.89
TPM1-218ENST00000559281 CSF2RAP15509 400 aa20.6■□□□□ 0.89
TPM1-218ENST00000559281 HSD17B4P51659 736 aa20.6■□□□□ 0.89
TPM1-218ENST00000559281 MB21D2Q8IYB1 491 aaPredicted RBP20.6■□□□□ 0.89
TPM1-218ENST00000559281 MAP3K14Q99558 947 aa20.6■□□□□ 0.89
TPM1-218ENST00000559281 TRPV6Q9H1D0 765 aa20.6■□□□□ 0.89
TPM1-218ENST00000559281 ALDH8A1Q9H2A2 487 aaPredicted RBP20.6■□□□□ 0.89
TPM1-218ENST00000559281 COL20A1Q9P218 1284 aa20.6■□□□□ 0.89
TPM1-218ENST00000559281 B4GALT4O60513 344 aa20.59■□□□□ 0.89
TPM1-218ENST00000559281 GH1P01241 217 aa20.59■□□□□ 0.89
TPM1-218ENST00000559281 NR3C2P08235 984 aa20.59■□□□□ 0.89
TPM1-218ENST00000559281 EIF2AK2P19525 551 aaKnown RBP20.59■□□□□ 0.89
TPM1-218ENST00000559281 KIF5BP33176 963 aa20.59■□□□□ 0.89
TPM1-218ENST00000559281 MCM5P33992 734 aa20.59■□□□□ 0.89
TPM1-218ENST00000559281 GHRHRQ02643 423 aa20.59■□□□□ 0.89
TPM1-218ENST00000559281 BMP2KLQ5H9B9 411 aa20.59■□□□□ 0.89
TPM1-218ENST00000559281 CCDC62Q6P9F0 684 aa20.59■□□□□ 0.89
TPM1-218ENST00000559281 PSRC1Q6PGN9 363 aaPredicted RBP20.59■□□□□ 0.89
TPM1-218ENST00000559281 CTCFLQ8NI51 663 aaPredicted RBP20.59■□□□□ 0.89
TPM1-218ENST00000559281 COPS5Q92905 334 aa20.59■□□□□ 0.89
TPM1-218ENST00000559281 PIGSQ96S52 555 aa20.59■□□□□ 0.89
TPM1-218ENST00000559281 LSG1Q9H089 658 aaKnown RBP20.59■□□□□ 0.89
TPM1-218ENST00000559281 SENP2Q9HC62 589 aa20.59■□□□□ 0.89
TPM1-218ENST00000559281 PXMP2Q9NR77 195 aa20.59■□□□□ 0.89
TPM1-218ENST00000559281 LTBP2Q14767 1821 aa20.58■□□□□ 0.89
TPM1-218ENST00000559281 GCOM1H8Y6P7 765 aaPredicted RBP20.58■□□□□ 0.89
TPM1-218ENST00000559281 PPP1R11O60927 126 aaPredicted RBP20.58■□□□□ 0.89
TPM1-218ENST00000559281 POLR2MP0CAP2 368 aa20.58■□□□□ 0.89
TPM1-218ENST00000559281 CYP2C18P33260 490 aa20.58■□□□□ 0.89
TPM1-218ENST00000559281 ANTXR2P58335 489 aa20.58■□□□□ 0.89
TPM1-218ENST00000559281 TMEM87BQ96K49 555 aa20.58■□□□□ 0.89
TPM1-218ENST00000559281 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.58■□□□□ 0.891e-6■□□□□ 10.6
TPM1-218ENST00000559281 ANO2Q9NQ90 1003 aa20.58■□□□□ 0.89
TPM1-218ENST00000559281 OPLAHO14841 1288 aa20.57■□□□□ 0.88
TPM1-218ENST00000559281 PRC1O43663 620 aa20.57■□□□□ 0.88
TPM1-218ENST00000559281 DDAH1O94760 285 aa20.57■□□□□ 0.88
TPM1-218ENST00000559281 ARIH2O95376 493 aa20.57■□□□□ 0.88
TPM1-218ENST00000559281 GNAQP50148 359 aa20.57■□□□□ 0.88
TPM1-218ENST00000559281 PTPN11Q06124 597 aaPredicted RBP20.57■□□□□ 0.88
TPM1-218ENST00000559281 LY6KQ17RY6 165 aa20.57■□□□□ 0.88
TPM1-218ENST00000559281 NBPF20Q3BBV1 942 aa20.57■□□□□ 0.88
TPM1-218ENST00000559281 FAM47CQ5HY64 1035 aa20.57■□□□□ 0.88
TPM1-218ENST00000559281 TMEM240Q5SV17 173 aa20.57■□□□□ 0.88
TPM1-218ENST00000559281 RNF20Q5VTR2 975 aa20.57■□□□□ 0.88
TPM1-218ENST00000559281 NFRKBQ6P4R8 1299 aa20.57■□□□□ 0.88
TPM1-218ENST00000559281 KCNV1Q6PIU1 500 aa20.57■□□□□ 0.88
TPM1-218ENST00000559281 NFXL1Q6ZNB6 911 aa20.57■□□□□ 0.88
TPM1-218ENST00000559281 RPUSD2Q8IZ73 545 aaKnown RBP20.57■□□□□ 0.88
TPM1-218ENST00000559281 SLC17A8Q8NDX2 589 aa20.57■□□□□ 0.88
TPM1-218ENST00000559281 FAM161BQ96MY7 647 aa20.57■□□□□ 0.88
TPM1-218ENST00000559281 LZTS2Q9BRK4 669 aa20.57■□□□□ 0.88
TPM1-218ENST00000559281 MTIF3Q9H2K0 278 aaKnown RBP20.57■□□□□ 0.88
TPM1-218ENST00000559281 IL23AQ9NPF7 189 aa20.57■□□□□ 0.88
TPM1-218ENST00000559281 TMEM265A0A087WTH1 108 aa20.56■□□□□ 0.88
TPM1-218ENST00000559281 CCDC69A6NI79 296 aa20.56■□□□□ 0.88
TPM1-218ENST00000559281 SLC27A2O14975 620 aa20.56■□□□□ 0.88
TPM1-218ENST00000559281 CYTH3O43739 400 aa20.56■□□□□ 0.88
TPM1-218ENST00000559281 CASTP20810 708 aaKnown RBP20.56■□□□□ 0.88
TPM1-218ENST00000559281 SMARCA1P28370 1054 aa20.56■□□□□ 0.88
TPM1-218ENST00000559281 ZNF365Q70YC5 407 aa20.56■□□□□ 0.88
TPM1-218ENST00000559281 C16orf59Q7L2K0 433 aa20.56■□□□□ 0.88
TPM1-218ENST00000559281 ZNF654Q8IZM8 581 aa20.56■□□□□ 0.88
TPM1-218ENST00000559281 PDCD2LQ9BRP1 358 aa20.56■□□□□ 0.88
TPM1-218ENST00000559281 NOC4LQ9BVI4 516 aaKnown RBP20.56■□□□□ 0.88
TPM1-218ENST00000559281 SEMA6BQ9H3T3 888 aa20.56■□□□□ 0.88
TPM1-218ENST00000559281 LY9Q9HBG7 655 aa20.56■□□□□ 0.88
TPM1-218ENST00000559281 MRVI1Q9Y6F6 885 aa20.56■□□□□ 0.88
TPM1-218ENST00000559281 FGBP02675 491 aa20.55■□□□□ 0.88
TPM1-218ENST00000559281 CALM1P0DP23 149 aa20.55■□□□□ 0.88
TPM1-218ENST00000559281 CALM2P0DP24 149 aa20.55■□□□□ 0.88
TPM1-218ENST00000559281 CALM3P0DP25 149 aa20.55■□□□□ 0.88
TPM1-218ENST00000559281 ACRP10323 421 aa20.55■□□□□ 0.88
TPM1-218ENST00000559281 MYCLP12524 364 aaPredicted RBP20.55■□□□□ 0.88
TPM1-218ENST00000559281 HOXA13P31271 388 aaPredicted RBP20.55■□□□□ 0.88
TPM1-218ENST00000559281 CCL23P55773 120 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms