RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 GCOM1H8Y6P7 765 aaPredicted RBP21.58■■□□□ 1.05
CASC4-209ENST00000559222 MEIS2O14770 477 aa21.58■■□□□ 1.05
CASC4-209ENST00000559222 MSCO60682 206 aa21.58■■□□□ 1.05
CASC4-209ENST00000559222 MYCNP04198 464 aaPredicted RBP21.58■■□□□ 1.05
CASC4-209ENST00000559222 POLR2MP0CAP2 368 aa21.58■■□□□ 1.05
CASC4-209ENST00000559222 NEK4P51957 841 aa21.58■■□□□ 1.05
CASC4-209ENST00000559222 ZNF274Q96GC6 653 aaPredicted RBP21.58■■□□□ 1.05
CASC4-209ENST00000559222 ALDH8A1Q9H2A2 487 aaPredicted RBP21.58■■□□□ 1.05
CASC4-209ENST00000559222 XPNPEP3Q9NQH7 507 aa21.58■■□□□ 1.05
CASC4-209ENST00000559222 FAM184BQ9ULE4 1060 aa21.58■■□□□ 1.05
CASC4-209ENST00000559222 EIF5BO60841 1220 aaKnown RBP21.57■■□□□ 1.04
CASC4-209ENST00000559222 ADAMTS4O75173 837 aa21.57■■□□□ 1.04
CASC4-209ENST00000559222 RARBP10826 455 aa21.57■■□□□ 1.04
CASC4-209ENST00000559222 SMPD1P17405 629 aa21.57■■□□□ 1.04
CASC4-209ENST00000559222 PDE4DQ08499 809 aa21.57■■□□□ 1.04
CASC4-209ENST00000559222 SCRN1Q12765 414 aa21.57■■□□□ 1.04
CASC4-209ENST00000559222 LRRC41Q15345 812 aa21.57■■□□□ 1.04
CASC4-209ENST00000559222 VTA1Q9NP79 307 aa21.57■■□□□ 1.04
CASC4-209ENST00000559222 CCDC196A0A1B0GTZ2 297 aa21.56■■□□□ 1.04
CASC4-209ENST00000559222 RBM25P49756 843 aaKnown RBP21.56■■□□□ 1.04
CASC4-209ENST00000559222 PPP2R5BQ15173 497 aa21.56■■□□□ 1.04
CASC4-209ENST00000559222 ARHGEF16Q5VV41 709 aa21.56■■□□□ 1.04
CASC4-209ENST00000559222 ANKLE1Q8NAG6 615 aa21.56■■□□□ 1.04
CASC4-209ENST00000559222 NSUN6Q8TEA1 469 aaKnown RBP21.56■■□□□ 1.04
CASC4-209ENST00000559222 PDCD2LQ9BRP1 358 aa21.56■■□□□ 1.04
CASC4-209ENST00000559222 SLC26A6Q9BXS9 759 aa21.56■■□□□ 1.04
CASC4-209ENST00000559222 MAF1Q9H063 256 aa21.56■■□□□ 1.04
CASC4-209ENST00000559222 DOCK5Q9H7D0 1870 aa21.56■■□□□ 1.04
CASC4-209ENST00000559222 CTAGE5O15320 804 aa21.55■■□□□ 1.04
CASC4-209ENST00000559222 PRPF3O43395 683 aaKnown RBP21.55■■□□□ 1.04
CASC4-209ENST00000559222 ARIH2O95376 493 aa21.55■■□□□ 1.04
CASC4-209ENST00000559222 COL6A1P12109 1028 aa21.55■■□□□ 1.04
CASC4-209ENST00000559222 IFNAR1P17181 557 aa21.55■■□□□ 1.04
CASC4-209ENST00000559222 NAPAP54920 295 aa21.55■■□□□ 1.04
CASC4-209ENST00000559222 TNFAIP2Q03169 654 aa21.55■■□□□ 1.04
CASC4-209ENST00000559222 ST3GAL1Q11201 340 aa21.55■■□□□ 1.04
CASC4-209ENST00000559222 TRAF1Q13077 416 aa21.55■■□□□ 1.04
CASC4-209ENST00000559222 PGM5Q15124 567 aa21.55■■□□□ 1.04
CASC4-209ENST00000559222 PFKFB3Q16875 520 aaPredicted RBP21.55■■□□□ 1.04
CASC4-209ENST00000559222 NECAB1Q8N987 351 aa21.55■■□□□ 1.04
CASC4-209ENST00000559222 GNEQ9Y223 722 aaKnown RBP21.55■■□□□ 1.04
CASC4-209ENST00000559222 FRMPD4Q14CM0 1322 aa21.55■■□□□ 1.04
CASC4-209ENST00000559222 LOC102724159A0A0B4J2E5 919 aa21.54■■□□□ 1.04
CASC4-209ENST00000559222 NR3C2P08235 984 aa21.54■■□□□ 1.04
CASC4-209ENST00000559222 MYCLP12524 364 aaPredicted RBP21.54■■□□□ 1.04
CASC4-209ENST00000559222 SCG2P13521 617 aa21.54■■□□□ 1.04
CASC4-209ENST00000559222 PWP2Q15269 919 aaKnown RBP21.54■■□□□ 1.04
CASC4-209ENST00000559222 ME3Q16798 604 aa21.54■■□□□ 1.04
CASC4-209ENST00000559222 COPS5Q92905 334 aa21.54■■□□□ 1.04
CASC4-209ENST00000559222 PGBD1Q96JS3 809 aa21.54■■□□□ 1.04
CASC4-209ENST00000559222 C11orf49Q9H6J7 331 aa21.54■■□□□ 1.04
CASC4-209ENST00000559222 PSTPIP2Q9H939 334 aa21.54■■□□□ 1.04
CASC4-209ENST00000559222 BARHL2Q9NY43 387 aa21.54■■□□□ 1.04
CASC4-209ENST00000559222 RBM47A0AV96 593 aaKnown RBP21.53■■□□□ 1.04
CASC4-209ENST00000559222 PIK3CDO00329 1044 aa21.53■■□□□ 1.04
CASC4-209ENST00000559222 DNM1LO00429 736 aa21.53■■□□□ 1.04
CASC4-209ENST00000559222 PFKFB2O60825 505 aa21.53■■□□□ 1.04
CASC4-209ENST00000559222 DUSP11O75319 330 aaKnown RBP21.53■■□□□ 1.04
CASC4-209ENST00000559222 RGS20O76081 388 aa21.53■■□□□ 1.04
CASC4-209ENST00000559222 CTDNEP1O95476 244 aa21.53■■□□□ 1.04
CASC4-209ENST00000559222 BEX3Q00994 111 aa21.53■■□□□ 1.04
CASC4-209ENST00000559222 NECAB2Q7Z6G3 386 aa21.53■■□□□ 1.04
CASC4-209ENST00000559222 SMARCC2Q8TAQ2 1214 aa21.53■■□□□ 1.04
CASC4-209ENST00000559222 AIFM3Q96NN9 605 aa21.53■■□□□ 1.04
CASC4-209ENST00000559222 UPF3AQ9H1J1 476 aaKnown RBP21.53■■□□□ 1.04
CASC4-209ENST00000559222 MAP3K20Q9NYL2 800 aaKnown RBP21.53■■□□□ 1.04
CASC4-209ENST00000559222 SEPT14Q6ZU15 432 aa21.52■■□□□ 1.04
CASC4-209ENST00000559222 TLK2Q86UE8 772 aa21.52■■□□□ 1.04
CASC4-209ENST00000559222 SAMD3Q8N6K7 520 aa21.52■■□□□ 1.04
CASC4-209ENST00000559222 KLHDC9Q8NEP7 349 aa21.52■■□□□ 1.04
CASC4-209ENST00000559222 FERMT2Q96AC1 680 aa21.52■■□□□ 1.04
CASC4-209ENST00000559222 IWS1Q96ST2 819 aa21.52■■□□□ 1.04
CASC4-209ENST00000559222 RNF26Q9BY78 433 aaPredicted RBP21.52■■□□□ 1.04
CASC4-209ENST00000559222 WDR11Q9BZH6 1224 aa21.52■■□□□ 1.04
CASC4-209ENST00000559222 SLKQ9H2G2 1235 aaPredicted RBP21.52■■□□□ 1.04
CASC4-209ENST00000559222 TMEM260Q9NX78 707 aa21.52■■□□□ 1.04
CASC4-209ENST00000559222 MYH7BA7E2Y1 1941 aa21.52■■□□□ 1.04
CASC4-209ENST00000559222 GJA9P57773 515 aa21.51■■□□□ 1.03
CASC4-209ENST00000559222 MRPS9P82933 396 aaKnown RBP21.51■■□□□ 1.03
CASC4-209ENST00000559222 CCSAPQ6IQ19 270 aaPredicted RBP21.51■■□□□ 1.03
CASC4-209ENST00000559222 PPP1R18Q6NYC8 613 aa21.51■■□□□ 1.03
CASC4-209ENST00000559222 CUL5Q93034 780 aa21.51■■□□□ 1.03
CASC4-209ENST00000559222 RIC8AQ9NPQ8 531 aa21.51■■□□□ 1.03
CASC4-209ENST00000559222 VPS54Q9P1Q0 977 aa21.51■■□□□ 1.03
CASC4-209ENST00000559222 SMCO2A6NFE2 343 aa21.5■■□□□ 1.03
CASC4-209ENST00000559222 C6orf222P0C671 652 aaPredicted RBP21.5■■□□□ 1.03
CASC4-209ENST00000559222 ADCY7P51828 1080 aa21.5■■□□□ 1.03
CASC4-209ENST00000559222 ANKRD1Q15327 319 aa21.5■■□□□ 1.03
CASC4-209ENST00000559222 STXBP2Q15833 593 aa21.5■■□□□ 1.03
CASC4-209ENST00000559222 LRRC26Q2I0M4 334 aa21.5■■□□□ 1.03
CASC4-209ENST00000559222 DUSP28Q4G0W2 176 aa21.5■■□□□ 1.03
CASC4-209ENST00000559222 IQSEC1Q6DN90 963 aa21.5■■□□□ 1.03
CASC4-209ENST00000559222 VSIG10LQ86VR7 867 aa21.5■■□□□ 1.03
CASC4-209ENST00000559222 ARRDC4Q8NCT1 418 aa21.5■■□□□ 1.03
CASC4-209ENST00000559222 TBC1D32Q96NH3 1257 aa21.5■■□□□ 1.03
CASC4-209ENST00000559222 BACH2Q9BYV9 841 aa21.5■■□□□ 1.03
CASC4-209ENST00000559222 SENP6Q9GZR1 1112 aaPredicted RBP21.5■■□□□ 1.03
CASC4-209ENST00000559222 KBTBD13C9JR72 458 aa21.49■■□□□ 1.03
CASC4-209ENST00000559222 hCG_1984214I3L0E3 225 aa21.49■■□□□ 1.03
CASC4-209ENST00000559222 CPLX1O14810 134 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms