RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 CDX2Q99626 313 aaPredicted RBP6.5□□□□□ -1.37
SMAD3-209ENST00000558894 NOC4LQ9BVI4 516 aaKnown RBP6.5□□□□□ -1.37
SMAD3-209ENST00000558894 WDR11Q9BZH6 1224 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 MAF1Q9H063 256 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 TRPV6Q9H1D0 765 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 WNT8AQ9H1J5 351 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 DIAPH3Q9NSV4 1193 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 ADD3Q9UEY8 706 aaKnown RBP6.5□□□□□ -1.37
SMAD3-209ENST00000558894 MAD2L2Q9UI95 211 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 ISY1Q9ULR0 285 aaKnown RBP6.5□□□□□ -1.37
SMAD3-209ENST00000558894 MROH7Q68CQ1 1323 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 RAD50Q92878 1312 aa6.5□□□□□ -1.37
SMAD3-209ENST00000558894 GRXCR1A8MXD5 290 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 SGSM2O43147 1006 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 CYTH3O43739 400 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 CABYRO75952 493 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 RGS20O76081 388 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 ACRP10323 421 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 CYP2C18P33260 490 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 PBX2P40425 430 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 HSD17B4P51659 736 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 ARHGAP1Q07960 439 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 TROAPQ12815 778 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 IMMTQ16891 758 aaKnown RBP6.49□□□□□ -1.37
SMAD3-209ENST00000558894 USH1GQ495M9 461 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 ASPRV1Q53RT3 343 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 CCDC178Q5BJE1 867 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 ZNF365Q70YC5 407 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 IQCA1Q86XH1 822 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 PPP1R13LQ8WUF5 828 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 MAP4K1Q92918 833 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 PPP1R12CQ9BZL4 782 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 KRT23Q9C075 422 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 AP5M1Q9H0R1 490 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 ALDH8A1Q9H2A2 487 aaPredicted RBP6.49□□□□□ -1.37
SMAD3-209ENST00000558894 KAT14Q9H8E8 782 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 SPC25Q9HBM1 224 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 CXXC1Q9P0U4 656 aaPredicted RBP6.49□□□□□ -1.37
SMAD3-209ENST00000558894 CTNNA3Q9UI47 895 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 PNMA2Q9UL42 364 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 ABCB11O95342 1321 aa6.49□□□□□ -1.37
SMAD3-209ENST00000558894 COL4A4P53420 1690 aaPredicted RBP6.49□□□□□ -1.37
SMAD3-209ENST00000558894 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.48□□□□□ -1.37
SMAD3-209ENST00000558894 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.48□□□□□ -1.37
SMAD3-209ENST00000558894 KLRF2D3W0D1 207 aa6.48□□□□□ -1.37
SMAD3-209ENST00000558894 E7EWF7 191 aa6.48□□□□□ -1.37
SMAD3-209ENST00000558894 PARP1P09874 1014 aaKnown RBP6.48□□□□□ -1.37
SMAD3-209ENST00000558894 TXNP10599 105 aaKnown RBP6.48□□□□□ -1.37
SMAD3-209ENST00000558894 PLA2G5P39877 138 aa6.48□□□□□ -1.37
SMAD3-209ENST00000558894 GRM4Q14833 912 aa6.48□□□□□ -1.37
SMAD3-209ENST00000558894 GPNMBQ14956 572 aa6.48□□□□□ -1.37
SMAD3-209ENST00000558894 GRIN2CQ14957 1233 aa6.48□□□□□ -1.37
SMAD3-209ENST00000558894 ZNF697Q5TEC3 545 aa6.48□□□□□ -1.37
SMAD3-209ENST00000558894 SKAP1Q86WV1 359 aa6.48□□□□□ -1.37
SMAD3-209ENST00000558894 MB21D2Q8IYB1 491 aaPredicted RBP6.48□□□□□ -1.37
SMAD3-209ENST00000558894 IGDCC4Q8TDY8 1250 aa6.48□□□□□ -1.37
SMAD3-209ENST00000558894 HERVK_113Q902F9 699 aa6.48□□□□□ -1.37
SMAD3-209ENST00000558894 KAT2BQ92831 832 aa6.48□□□□□ -1.37
SMAD3-209ENST00000558894 RNPC3Q96LT9 517 aaKnown RBP6.48□□□□□ -1.37
SMAD3-209ENST00000558894 SEZ6LQ9BYH1 1024 aa6.48□□□□□ -1.37
SMAD3-209ENST00000558894 PBX4Q9BYU1 374 aa6.48□□□□□ -1.37
SMAD3-209ENST00000558894 RIOX1Q9H6W3 641 aa6.48□□□□□ -1.37
SMAD3-209ENST00000558894 CNNM2Q9H8M5 875 aa6.48□□□□□ -1.37
SMAD3-209ENST00000558894 IL23AQ9NPF7 189 aa6.48□□□□□ -1.37
SMAD3-209ENST00000558894 TRMT13Q9NUP7 481 aaKnown RBP6.48□□□□□ -1.37
SMAD3-209ENST00000558894 DDX41Q9UJV9 622 aaKnown RBP6.48□□□□□ -1.37
SMAD3-209ENST00000558894 ATG2AQ2TAZ0 1938 aa6.48□□□□□ -1.37
SMAD3-209ENST00000558894 WDR81Q562E7 1941 aa6.48□□□□□ -1.37
SMAD3-209ENST00000558894 MICAL3Q7RTP6 2002 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 LOXHD1Q8IVV2 1947 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 TMEM265A0A087WTH1 108 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 ZBTB5O15062 677 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 NKRFO15226 690 aaKnown RBP eCLIP6.47□□□□□ -1.375e-6■□□□□ 8.8
SMAD3-209ENST00000558894 TLR3O15455 904 aaKnown RBP6.47□□□□□ -1.37
SMAD3-209ENST00000558894 MMP3P08254 477 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 HOXD8P13378 290 aaPredicted RBP6.47□□□□□ -1.37
SMAD3-209ENST00000558894 DNAJB2P25686 324 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 CPT1AP50416 773 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 CCL23P55773 120 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 SP2Q02086 613 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 PDE4DQ08499 809 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 PPIGQ13427 754 aaKnown RBP eCLIP6.47□□□□□ -1.372e-7■■■□□ 15.1
SMAD3-209ENST00000558894 HIC1Q14526 733 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 LY6KQ17RY6 165 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 NBPF20Q3BBV1 942 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 IFIT1BQ5T764 474 aaKnown RBP6.47□□□□□ -1.37
SMAD3-209ENST00000558894 NOL8Q76FK4 1167 aaKnown RBP6.47□□□□□ -1.37
SMAD3-209ENST00000558894 CHST3Q7LGC8 479 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 FBXO11Q86XK2 927 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 TMEM199Q8N511 208 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 OR6J1Q8NGC5 347 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 IL31RAQ8NI17 732 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 SCFD2Q8WU76 684 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 MYLIPQ8WY64 445 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 EMID1Q96A84 441 aaPredicted RBP6.47□□□□□ -1.37
SMAD3-209ENST00000558894 VTI1AQ96AJ9 217 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 SCLYQ96I15 445 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 PIGSQ96S52 555 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 IWS1Q96ST2 819 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 MTG1Q9BT17 334 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms