RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 SCG5P05408 212 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 RPL10P27635 214 aaKnown RBP6.21□□□□□ -1.42
CASC4-206ENST00000558847 L1CAMP32004 1257 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 SOX5P35711 763 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 PPP2R5DQ14738 602 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 NR0B2Q15466 257 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 TM4SF20Q53R12 229 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 TRIM61Q5EBN2 209 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 MAMDC2Q7Z304 686 aaPredicted RBP6.21□□□□□ -1.42
CASC4-206ENST00000558847 ZNF605Q86T29 641 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 AMIGO3Q86WK7 504 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 LILRA2Q8N149 483 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 ANKS4BQ8N8V4 417 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 BTN2A2Q8WVV5 523 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 OSBP2Q969R2 916 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 HHIPL1Q96JK4 782 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 ZDHHC15Q96MV8 337 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 MCMBPQ9BTE3 642 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 KRTAP4-2Q9BYR5 136 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 PCDH12Q9NPG4 1184 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 AP5S1Q9NUS5 200 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 SSU72P8A0A1W2PR75 194 aa6.2□□□□□ -1.42
CASC4-206ENST00000558847 FITM1A5D6W6 292 aa6.2□□□□□ -1.42
CASC4-206ENST00000558847 PRRG2O14669 202 aa6.2□□□□□ -1.42
CASC4-206ENST00000558847 SNRPB2P08579 225 aaKnown RBP6.2□□□□□ -1.42
CASC4-206ENST00000558847 IFNGR1P15260 489 aa6.2□□□□□ -1.42
CASC4-206ENST00000558847 PDE6BP35913 854 aa6.2□□□□□ -1.42
CASC4-206ENST00000558847 KCNJ6P48051 423 aa6.2□□□□□ -1.42
CASC4-206ENST00000558847 GFRA1P56159 465 aa6.2□□□□□ -1.42
CASC4-206ENST00000558847 YOD1Q5VVQ6 348 aaPredicted RBP6.2□□□□□ -1.42
CASC4-206ENST00000558847 FOXB2Q5VYV0 432 aa6.2□□□□□ -1.42
CASC4-206ENST00000558847 CHAC2Q8WUX2 184 aa6.2□□□□□ -1.42
CASC4-206ENST00000558847 PTPRN2Q92932 1015 aa6.2□□□□□ -1.42
CASC4-206ENST00000558847 GPR160Q9UJ42 338 aa6.2□□□□□ -1.42
CASC4-206ENST00000558847 GPR55Q9Y2T6 319 aaPredicted RBP6.2□□□□□ -1.42
CASC4-206ENST00000558847 NCANO14594 1321 aa6.2□□□□□ -1.42
CASC4-206ENST00000558847 TRBV23OR9-2A0A075B6M9 112 aa6.19□□□□□ -1.42
CASC4-206ENST00000558847 FGF10O15520 208 aaPredicted RBP6.19□□□□□ -1.42
CASC4-206ENST00000558847 CD3EP07766 207 aa6.19□□□□□ -1.42
CASC4-206ENST00000558847 FLT3P36888 993 aa6.19□□□□□ -1.42
CASC4-206ENST00000558847 KIR2DL1P43626 348 aaPredicted RBP6.19□□□□□ -1.42
CASC4-206ENST00000558847 KIR2DL2P43627 348 aaPredicted RBP6.19□□□□□ -1.42
CASC4-206ENST00000558847 CTSWP56202 376 aa6.19□□□□□ -1.42
CASC4-206ENST00000558847 CHRNEQ04844 493 aa6.19□□□□□ -1.42
CASC4-206ENST00000558847 CT47A1Q5JQC4 288 aaPredicted RBP6.19□□□□□ -1.42
CASC4-206ENST00000558847 SLCO6A1Q86UG4 719 aa6.19□□□□□ -1.42
CASC4-206ENST00000558847 IRF2BP1Q8IU81 584 aa6.19□□□□□ -1.42
CASC4-206ENST00000558847 SPPL2CQ8IUH8 684 aa6.19□□□□□ -1.42
CASC4-206ENST00000558847 AHI1Q8N157 1196 aa6.19□□□□□ -1.42
CASC4-206ENST00000558847 SHISA4Q96DD7 197 aa6.19□□□□□ -1.42
CASC4-206ENST00000558847 GPATCH3Q96I76 525 aa6.19□□□□□ -1.42
CASC4-206ENST00000558847 FCRL3Q96P31 734 aaPredicted RBP6.19□□□□□ -1.42
CASC4-206ENST00000558847 CDADC1Q9BWV3 514 aa6.19□□□□□ -1.42
CASC4-206ENST00000558847 LGR4Q9BXB1 951 aa6.19□□□□□ -1.42
CASC4-206ENST00000558847 CAAP1Q9H8G2 361 aa6.19□□□□□ -1.42
CASC4-206ENST00000558847 MAPRE3Q9UPY8 281 aa6.19□□□□□ -1.42
CASC4-206ENST00000558847 FADS2P1A8MWK0 482 aa6.18□□□□□ -1.42
CASC4-206ENST00000558847 B4E1Z4 1266 aa6.18□□□□□ -1.42
CASC4-206ENST00000558847 AQP7O14520 342 aa6.18□□□□□ -1.42
CASC4-206ENST00000558847 DLX3O60479 287 aa6.18□□□□□ -1.42
CASC4-206ENST00000558847 RAPGEF3O95398 923 aa6.18□□□□□ -1.42
CASC4-206ENST00000558847 GSTM1P09488 218 aa6.18□□□□□ -1.42
CASC4-206ENST00000558847 MYCLP1P12525 358 aaPredicted RBP6.18□□□□□ -1.42
CASC4-206ENST00000558847 CPEP16870 476 aa6.18□□□□□ -1.42
CASC4-206ENST00000558847 CNGA1P29973 690 aa6.18□□□□□ -1.42
CASC4-206ENST00000558847 RSPO2Q6UXX9 243 aaPredicted RBP6.18□□□□□ -1.42
CASC4-206ENST00000558847 PPM1KQ8N3J5 372 aa6.18□□□□□ -1.42
CASC4-206ENST00000558847 TMEM52Q8NDY8 209 aa6.18□□□□□ -1.42
CASC4-206ENST00000558847 DCAF4Q8WV16 495 aa6.18□□□□□ -1.42
CASC4-206ENST00000558847 INTS4Q96HW7 963 aaKnown RBP6.18□□□□□ -1.42
CASC4-206ENST00000558847 ZFYVE21Q9BQ24 234 aa6.18□□□□□ -1.42
CASC4-206ENST00000558847 MCOLN1Q9GZU1 580 aa6.18□□□□□ -1.42
CASC4-206ENST00000558847 TNFRSF10DQ9UBN6 386 aa6.18□□□□□ -1.42
CASC4-206ENST00000558847 RAPGEFL1Q9UHV5 662 aa6.18□□□□□ -1.42
CASC4-206ENST00000558847 BACE2Q9Y5Z0 518 aa6.18□□□□□ -1.42
CASC4-206ENST00000558847 STXBP3O00186 592 aa6.17□□□□□ -1.42
CASC4-206ENST00000558847 AURKAO14965 403 aa6.17□□□□□ -1.42
CASC4-206ENST00000558847 TBX1O43435 398 aa6.17□□□□□ -1.42
CASC4-206ENST00000558847 NRDCO43847 1150 aa6.17□□□□□ -1.42
CASC4-206ENST00000558847 STAT3P40763 770 aa6.17□□□□□ -1.42
CASC4-206ENST00000558847 GRIA2P42262 883 aa6.17□□□□□ -1.42
CASC4-206ENST00000558847 DLG4P78352 724 aa6.17□□□□□ -1.42
CASC4-206ENST00000558847 ACBD5Q5T8D3 534 aaPredicted RBP6.17□□□□□ -1.42
CASC4-206ENST00000558847 EEF1DP3Q658K8 133 aa6.17□□□□□ -1.42
CASC4-206ENST00000558847 E4F1Q66K89 784 aaPredicted RBP6.17□□□□□ -1.42
CASC4-206ENST00000558847 IQCEQ6IPM2 695 aa6.17□□□□□ -1.42
CASC4-206ENST00000558847 RCSD1Q6JBY9 416 aa6.17□□□□□ -1.42
CASC4-206ENST00000558847 NLRX1Q86UT6 975 aa6.17□□□□□ -1.42
CASC4-206ENST00000558847 DHX37Q8IY37 1157 aaKnown RBP6.17□□□□□ -1.42
CASC4-206ENST00000558847 METTL14Q9HCE5 456 aaKnown RBP6.17□□□□□ -1.42
CASC4-206ENST00000558847 TYW1Q9NV66 732 aaKnown RBP6.17□□□□□ -1.42
CASC4-206ENST00000558847 NDOR1Q9UHB4 597 aa6.17□□□□□ -1.42
CASC4-206ENST00000558847 CNOT6Q9ULM6 557 aaKnown RBP6.17□□□□□ -1.42
CASC4-206ENST00000558847 IRS4O14654 1257 aaPredicted RBP6.16□□□□□ -1.42
CASC4-206ENST00000558847 PSPNO60542 156 aa6.16□□□□□ -1.42
CASC4-206ENST00000558847 PDE8AO60658 829 aa6.16□□□□□ -1.42
CASC4-206ENST00000558847 NPTXRO95502 500 aa6.16□□□□□ -1.42
CASC4-206ENST00000558847 ASLP04424 464 aa6.16□□□□□ -1.42
CASC4-206ENST00000558847 BMP7P18075 431 aa6.16□□□□□ -1.42
CASC4-206ENST00000558847 BUD31P41223 144 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms