RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 KRT32Q14532 448 aa17.72■□□□□ 0.43
RPL28-207ENST00000558815 C1orf53Q5VUE5 145 aa17.72■□□□□ 0.43
RPL28-207ENST00000558815 SYNE3Q6ZMZ3 975 aa17.72■□□□□ 0.43
RPL28-207ENST00000558815 SEPT14Q6ZU15 432 aa17.72■□□□□ 0.43
RPL28-207ENST00000558815 FCHSD1Q86WN1 690 aa17.72■□□□□ 0.43
RPL28-207ENST00000558815 CCDC82Q8N4S0 544 aa17.72■□□□□ 0.43
RPL28-207ENST00000558815 SCFD2Q8WU76 684 aa17.72■□□□□ 0.43
RPL28-207ENST00000558815 COPS5Q92905 334 aa17.72■□□□□ 0.43
RPL28-207ENST00000558815 RRP36Q96EU6 259 aaKnown RBP17.72■□□□□ 0.43
RPL28-207ENST00000558815 MAP3K14Q99558 947 aa17.72■□□□□ 0.43
RPL28-207ENST00000558815 SEC63Q9UGP8 760 aaKnown RBP17.72■□□□□ 0.43
RPL28-207ENST00000558815 NAP1L2Q9ULW6 460 aaPredicted RBP17.72■□□□□ 0.43
RPL28-207ENST00000558815 KIAA1217Q5T5P2 1943 aa17.72■□□□□ 0.43
RPL28-207ENST00000558815 RBM47A0AV96 593 aaKnown RBP17.71■□□□□ 0.43
RPL28-207ENST00000558815 ZEB2O60315 1214 aa17.71■□□□□ 0.43
RPL28-207ENST00000558815 CLTBP09497 229 aa17.71■□□□□ 0.43
RPL28-207ENST00000558815 MYCLP12524 364 aaPredicted RBP17.71■□□□□ 0.43
RPL28-207ENST00000558815 CPA1P15085 419 aa17.71■□□□□ 0.43
RPL28-207ENST00000558815 GNAQP50148 359 aa17.71■□□□□ 0.43
RPL28-207ENST00000558815 HSD17B4P51659 736 aa17.71■□□□□ 0.43
RPL28-207ENST00000558815 FGD1P98174 961 aa17.71■□□□□ 0.43
RPL28-207ENST00000558815 DHX32Q7L7V1 743 aaKnown RBP17.71■□□□□ 0.43
RPL28-207ENST00000558815 SRBD1Q8N5C6 995 aaKnown RBP17.71■□□□□ 0.43
RPL28-207ENST00000558815 SPZ1Q9BXG8 430 aa17.71■□□□□ 0.43
RPL28-207ENST00000558815 PXMP2Q9NR77 195 aa17.71■□□□□ 0.43
RPL28-207ENST00000558815 A0A0U1RQG5 324 aaPredicted RBP17.7■□□□□ 0.42
RPL28-207ENST00000558815 hCG_1642624A0A1W2PR95 340 aa17.7■□□□□ 0.42
RPL28-207ENST00000558815 TRIM43BA6NCK2 446 aa17.7■□□□□ 0.42
RPL28-207ENST00000558815 DCDC2CA8MYV0 355 aa17.7■□□□□ 0.42
RPL28-207ENST00000558815 GCOM1H8Y6P7 765 aaPredicted RBP17.7■□□□□ 0.42
RPL28-207ENST00000558815 REC8O95072 547 aa17.7■□□□□ 0.42
RPL28-207ENST00000558815 SLC34A2O95436 690 aa17.7■□□□□ 0.42
RPL28-207ENST00000558815 POLR2MP0CAP2 368 aa17.7■□□□□ 0.42
RPL28-207ENST00000558815 TXNP10599 105 aaKnown RBP17.7■□□□□ 0.42
RPL28-207ENST00000558815 BMP8BP34820 402 aa17.7■□□□□ 0.42
RPL28-207ENST00000558815 TTLL4Q14679 1199 aa17.7■□□□□ 0.42
RPL28-207ENST00000558815 STXBP2Q15833 593 aa17.7■□□□□ 0.42
RPL28-207ENST00000558815 BADQ92934 168 aa17.7■□□□□ 0.42
RPL28-207ENST00000558815 TRIM43Q96BQ3 446 aaPredicted RBP17.7■□□□□ 0.42
RPL28-207ENST00000558815 JAKMIP1Q96N16 626 aaKnown RBP17.7■□□□□ 0.42
RPL28-207ENST00000558815 LZTS2Q9BRK4 669 aa17.7■□□□□ 0.42
RPL28-207ENST00000558815 MAF1Q9H063 256 aa17.7■□□□□ 0.42
RPL28-207ENST00000558815 TMEM39AQ9NV64 488 aa17.7■□□□□ 0.42
RPL28-207ENST00000558815 Q9Y3F1 56 aa17.7■□□□□ 0.42
RPL28-207ENST00000558815 ELP1O95163 1332 aa17.7■□□□□ 0.42
RPL28-207ENST00000558815 TRIOBPQ9H2D6 2365 aa17.69■□□□□ 0.42
RPL28-207ENST00000558815 A0A1W2PPC1 479 aa17.69■□□□□ 0.42
RPL28-207ENST00000558815 ARIH2O95376 493 aa17.69■□□□□ 0.42
RPL28-207ENST00000558815 NR3C2P08235 984 aa17.69■□□□□ 0.42
RPL28-207ENST00000558815 MYL3P08590 195 aa17.69■□□□□ 0.42
RPL28-207ENST00000558815 HSPA4P34932 840 aa17.69■□□□□ 0.42
RPL28-207ENST00000558815 PSMC6P62333 389 aa17.69■□□□□ 0.42
RPL28-207ENST00000558815 NKX3-2P78367 333 aa17.69■□□□□ 0.42
RPL28-207ENST00000558815 EXOSC10Q01780 885 aaKnown RBP17.69■□□□□ 0.42
RPL28-207ENST00000558815 TSGA10IPQ3SY00 556 aa17.69■□□□□ 0.42
RPL28-207ENST00000558815 APOA5Q6Q788 366 aa17.69■□□□□ 0.42
RPL28-207ENST00000558815 SGMS1Q86VZ5 419 aa17.69■□□□□ 0.42
RPL28-207ENST00000558815 FANCBQ8NB91 859 aa17.69■□□□□ 0.42
RPL28-207ENST00000558815 ZFP91Q96JP5 570 aaPredicted RBP17.69■□□□□ 0.42
RPL28-207ENST00000558815 IWS1Q96ST2 819 aa17.69■□□□□ 0.42
RPL28-207ENST00000558815 SNX14Q9Y5W7 946 aa17.69■□□□□ 0.42
RPL28-207ENST00000558815 MROH7Q68CQ1 1323 aa17.69■□□□□ 0.42
RPL28-207ENST00000558815 KLF18A0A0U1RQI7 1052 aa17.68■□□□□ 0.42
RPL28-207ENST00000558815 ARVCFO00192 962 aa17.68■□□□□ 0.42
RPL28-207ENST00000558815 ZBTB43O43298 467 aa17.68■□□□□ 0.42
RPL28-207ENST00000558815 RAG1P15918 1043 aa17.68■□□□□ 0.42
RPL28-207ENST00000558815 CPT1AP50416 773 aa17.68■□□□□ 0.42
RPL28-207ENST00000558815 FAAP100Q0VG06 881 aa17.68■□□□□ 0.42
RPL28-207ENST00000558815 LY6KQ17RY6 165 aa17.68■□□□□ 0.42
RPL28-207ENST00000558815 ERICH6BQ5W0A0 696 aa17.68■□□□□ 0.42
RPL28-207ENST00000558815 TMTC3Q6ZXV5 915 aa17.68■□□□□ 0.42
RPL28-207ENST00000558815 TDHQ8IZJ6 230 aa17.68■□□□□ 0.42
RPL28-207ENST00000558815 BRPF3Q9ULD4 1205 aa17.68■□□□□ 0.42
RPL28-207ENST00000558815 NKRFO15226 690 aaKnown RBP eCLIP17.67■□□□□ 0.422e-11■■■□□ 17.4
RPL28-207ENST00000558815 CABYRO75952 493 aa17.67■□□□□ 0.42
RPL28-207ENST00000558815 HMGB1P09429 215 aaKnown RBP17.67■□□□□ 0.42
RPL28-207ENST00000558815 CHMP4BP1P59074 171 aa17.67■□□□□ 0.42
RPL28-207ENST00000558815 GHRHRQ02643 423 aa17.67■□□□□ 0.42
RPL28-207ENST00000558815 ITGA7Q13683 1181 aa17.67■□□□□ 0.42
RPL28-207ENST00000558815 RTN1Q16799 776 aa17.67■□□□□ 0.42
RPL28-207ENST00000558815 BRDTQ58F21 947 aaPredicted RBP17.67■□□□□ 0.42
RPL28-207ENST00000558815 BLOC1S2Q6QNY1 142 aa17.67■□□□□ 0.42
RPL28-207ENST00000558815 ANKRD33Q7Z3H0 272 aa17.67■□□□□ 0.42
RPL28-207ENST00000558815 IL31RAQ8NI17 732 aa17.67■□□□□ 0.42
RPL28-207ENST00000558815 PDCD2LQ9BRP1 358 aa17.67■□□□□ 0.42
RPL28-207ENST00000558815 POLR3EQ9NVU0 708 aa17.67■□□□□ 0.42
RPL28-207ENST00000558815 MAP3K20Q9NYL2 800 aaKnown RBP17.67■□□□□ 0.42
RPL28-207ENST00000558815 MRVI1Q9Y6F6 885 aa17.67■□□□□ 0.42
RPL28-207ENST00000558815 GOLGA8AA7E2F4 631 aa17.66■□□□□ 0.42
RPL28-207ENST00000558815 GOLGA8BA8MQT2 603 aa17.66■□□□□ 0.42
RPL28-207ENST00000558815 SOX1O00570 391 aaPredicted RBP17.66■□□□□ 0.42
RPL28-207ENST00000558815 TLR3O15455 904 aaKnown RBP17.66■□□□□ 0.42
RPL28-207ENST00000558815 SORBS3O60504 671 aa17.66■□□□□ 0.42
RPL28-207ENST00000558815 EIF3JO75822 258 aaKnown RBP17.66■□□□□ 0.42
RPL28-207ENST00000558815 ITGB8P26012 769 aa17.66■□□□□ 0.42
RPL28-207ENST00000558815 SMARCA1P28370 1054 aa17.66■□□□□ 0.42
RPL28-207ENST00000558815 CDK7P50613 346 aa17.66■□□□□ 0.42
RPL28-207ENST00000558815 PGM5Q15124 567 aa17.66■□□□□ 0.42
RPL28-207ENST00000558815 Q6ZUG5 572 aa17.66■□□□□ 0.42
RPL28-207ENST00000558815 SMARCC2Q8TAQ2 1214 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms