RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 OAZ1P54368 228 aa14.25□□□□□ -0.13
SMAD3-206ENST00000558739 PTGISQ16647 500 aa14.25□□□□□ -0.13
SMAD3-206ENST00000558739 GDF6Q6KF10 455 aaPredicted RBP14.25□□□□□ -0.13
SMAD3-206ENST00000558739 RASGRP2Q7LDG7 609 aa14.25□□□□□ -0.13
SMAD3-206ENST00000558739 SUGP1Q8IWZ8 645 aaKnown RBP14.25□□□□□ -0.13
SMAD3-206ENST00000558739 FBXL6Q8N531 539 aa14.25□□□□□ -0.13
SMAD3-206ENST00000558739 OR6J1Q8NGC5 347 aa14.25□□□□□ -0.13
SMAD3-206ENST00000558739 WDR11Q9BZH6 1224 aa14.25□□□□□ -0.13
SMAD3-206ENST00000558739 VTA1Q9NP79 307 aa14.25□□□□□ -0.13
SMAD3-206ENST00000558739 TLR9Q9NR96 1032 aa14.25□□□□□ -0.13
SMAD3-206ENST00000558739 FAM50BQ9Y247 325 aa14.25□□□□□ -0.13
SMAD3-206ENST00000558739 ALAS1P13196 640 aa14.24□□□□□ -0.13
SMAD3-206ENST00000558739 TRIM27P14373 513 aa14.24□□□□□ -0.13
SMAD3-206ENST00000558739 SELPP16109 830 aa14.24□□□□□ -0.13
SMAD3-206ENST00000558739 CPT1AP50416 773 aa14.24□□□□□ -0.13
SMAD3-206ENST00000558739 PTPROQ16827 1216 aa14.24□□□□□ -0.13
SMAD3-206ENST00000558739 CTR9Q6PD62 1173 aa14.24□□□□□ -0.13
SMAD3-206ENST00000558739 TMED8Q6PL24 325 aaPredicted RBP14.24□□□□□ -0.13
SMAD3-206ENST00000558739 AACSQ86V21 672 aa14.24□□□□□ -0.13
SMAD3-206ENST00000558739 AFAP1L1Q8TED9 768 aa14.24□□□□□ -0.13
SMAD3-206ENST00000558739 WNT8BQ93098 351 aa14.24□□□□□ -0.13
SMAD3-206ENST00000558739 DNAJC2Q99543 621 aaKnown RBP14.24□□□□□ -0.13
SMAD3-206ENST00000558739 NSUN3Q9H649 340 aaKnown RBP14.24□□□□□ -0.13
SMAD3-206ENST00000558739 CYP39A1Q9NYL5 469 aa14.24□□□□□ -0.13
SMAD3-206ENST00000558739 CLIP2Q9UDT6 1046 aa14.24□□□□□ -0.13
SMAD3-206ENST00000558739 FEM1BQ9UK73 627 aa14.24□□□□□ -0.13
SMAD3-206ENST00000558739 MYH7P12883 1935 aa14.23□□□□□ -0.13
SMAD3-206ENST00000558739 ZBED9Q6R2W3 1325 aa14.23□□□□□ -0.13
SMAD3-206ENST00000558739 PRR23AA6NEV1 266 aa14.23□□□□□ -0.13
SMAD3-206ENST00000558739 LINC01565O15544 149 aa14.23□□□□□ -0.13
SMAD3-206ENST00000558739 LRRFIP1Q32MZ4 808 aaKnown RBP14.23□□□□□ -0.13
SMAD3-206ENST00000558739 TRAF7Q6Q0C0 670 aa14.23□□□□□ -0.13
SMAD3-206ENST00000558739 ERMP1Q7Z2K6 904 aa14.23□□□□□ -0.13
SMAD3-206ENST00000558739 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
SMAD3-206ENST00000558739 MORC4Q8TE76 937 aa14.23□□□□□ -0.13
SMAD3-206ENST00000558739 CLUAP1Q96AJ1 413 aa14.23□□□□□ -0.13
SMAD3-206ENST00000558739 TRERF1Q96PN7 1200 aa14.23□□□□□ -0.13
SMAD3-206ENST00000558739 GPHNQ9NQX3 736 aaPredicted RBP14.23□□□□□ -0.13
SMAD3-206ENST00000558739 ATP8A2Q9NTI2 1148 aa14.23□□□□□ -0.13
SMAD3-206ENST00000558739 NYAP2Q9P242 653 aa14.23□□□□□ -0.13
SMAD3-206ENST00000558739 IGKV6D-41A0A0C4DH26 115 aa14.22□□□□□ -0.13
SMAD3-206ENST00000558739 H3BNC9 293 aa14.22□□□□□ -0.13
SMAD3-206ENST00000558739 STXBP3O00186 592 aa14.22□□□□□ -0.13
SMAD3-206ENST00000558739 PDGFBP01127 241 aaPredicted RBP14.22□□□□□ -0.13
SMAD3-206ENST00000558739 CKBP12277 381 aa14.22□□□□□ -0.13
SMAD3-206ENST00000558739 RARSP54136 660 aaKnown RBP14.22□□□□□ -0.13
SMAD3-206ENST00000558739 HTRA4P83105 476 aaPredicted RBP14.22□□□□□ -0.13
SMAD3-206ENST00000558739 ZXDAP98168 799 aa14.22□□□□□ -0.13
SMAD3-206ENST00000558739 HYAL1Q12794 435 aa14.22□□□□□ -0.13
SMAD3-206ENST00000558739 MKRN4PQ13434 485 aaPredicted RBP14.22□□□□□ -0.13
SMAD3-206ENST00000558739 GPM6BQ13491 265 aa14.22□□□□□ -0.13
SMAD3-206ENST00000558739 CTC1Q2NKJ3 1217 aa14.22□□□□□ -0.13
SMAD3-206ENST00000558739 NSMFQ6X4W1 530 aa14.22□□□□□ -0.13
SMAD3-206ENST00000558739 MYOCDQ8IZQ8 938 aa14.22□□□□□ -0.13
SMAD3-206ENST00000558739 CAGE1Q8TC20 777 aa14.22□□□□□ -0.13
SMAD3-206ENST00000558739 POP1Q99575 1024 aaKnown RBP14.22□□□□□ -0.13
SMAD3-206ENST00000558739 FSD1Q9BTV5 496 aa14.22□□□□□ -0.13
SMAD3-206ENST00000558739 ISY1Q9ULR0 285 aaKnown RBP14.22□□□□□ -0.13
SMAD3-206ENST00000558739 NOP58Q9Y2X3 529 aaKnown RBP14.22□□□□□ -0.13
SMAD3-206ENST00000558739 RALGAPA2Q2PPJ7 1873 aa14.22□□□□□ -0.13
SMAD3-206ENST00000558739 ABHD14A-ACY1A0A1B0GW23 586 aa14.21□□□□□ -0.13
SMAD3-206ENST00000558739 MED19A0JLT2 244 aaPredicted RBP14.21□□□□□ -0.13
SMAD3-206ENST00000558739 TMEM232C9JQI7 657 aa14.21□□□□□ -0.13
SMAD3-206ENST00000558739 LGR5O75473 907 aa14.21□□□□□ -0.13
SMAD3-206ENST00000558739 ASIC4Q96FT7 647 aa14.21□□□□□ -0.13
SMAD3-206ENST00000558739 CEP95Q96GE4 821 aa14.21□□□□□ -0.13
SMAD3-206ENST00000558739 PRRX2Q99811 253 aa14.21□□□□□ -0.13
SMAD3-206ENST00000558739 CTNNA3Q9UI47 895 aa14.21□□□□□ -0.13
SMAD3-206ENST00000558739 INSL6Q9Y581 213 aa14.21□□□□□ -0.13
SMAD3-206ENST00000558739 GPR179Q6PRD1 2367 aa14.2□□□□□ -0.14
SMAD3-206ENST00000558739 OTOGLQ3ZCN5 2332 aa14.2□□□□□ -0.14
SMAD3-206ENST00000558739 PKD1L2Q7Z442 2459 aa14.2□□□□□ -0.14
SMAD3-206ENST00000558739 A6NJR5 290 aa14.2□□□□□ -0.14
SMAD3-206ENST00000558739 PRDM1O75626 825 aa14.2□□□□□ -0.14
SMAD3-206ENST00000558739 ARIH2O95376 493 aa14.2□□□□□ -0.14
SMAD3-206ENST00000558739 ALDH5A1P51649 535 aaPredicted RBP14.2□□□□□ -0.14
SMAD3-206ENST00000558739 ATP8B2P98198 1209 aa14.2□□□□□ -0.14
SMAD3-206ENST00000558739 SMAD4Q13485 552 aaKnown RBP14.2□□□□□ -0.14
SMAD3-206ENST00000558739 TTF1Q15361 905 aaPredicted RBP14.2□□□□□ -0.14
SMAD3-206ENST00000558739 FBXO11Q86XK2 927 aa14.2□□□□□ -0.14
SMAD3-206ENST00000558739 TRMT2AQ8IZ69 625 aaKnown RBP14.2□□□□□ -0.14
SMAD3-206ENST00000558739 IL1RAPL2Q9NP60 686 aa14.2□□□□□ -0.14
SMAD3-206ENST00000558739 RBM47A0AV96 593 aaKnown RBP14.19□□□□□ -0.14
SMAD3-206ENST00000558739 PROB1E7EW31 1015 aa14.19□□□□□ -0.14
SMAD3-206ENST00000558739 ADD2P35612 726 aa14.19□□□□□ -0.14
SMAD3-206ENST00000558739 ID4P47928 161 aa14.19□□□□□ -0.14
SMAD3-206ENST00000558739 STAT2P52630 851 aa14.19□□□□□ -0.14
SMAD3-206ENST00000558739 PTPN11Q06124 597 aaPredicted RBP14.19□□□□□ -0.14
SMAD3-206ENST00000558739 RBL2Q08999 1139 aa14.19□□□□□ -0.14
SMAD3-206ENST00000558739 IKBKEQ14164 716 aa14.19□□□□□ -0.14
SMAD3-206ENST00000558739 PPP2R5BQ15173 497 aa14.19□□□□□ -0.14
SMAD3-206ENST00000558739 SLFN13Q68D06 897 aa14.19□□□□□ -0.14
SMAD3-206ENST00000558739 SLC30A10Q6XR72 485 aa14.19□□□□□ -0.14
SMAD3-206ENST00000558739 TMEM192Q8IY95 271 aa14.19□□□□□ -0.14
SMAD3-206ENST00000558739 CCDC155Q8N6L0 562 aa14.19□□□□□ -0.14
SMAD3-206ENST00000558739 ARHGAP45Q92619 1136 aa14.19□□□□□ -0.14
SMAD3-206ENST00000558739 KAT2BQ92831 832 aa14.19□□□□□ -0.14
SMAD3-206ENST00000558739 OSBPL7Q9BZF2 842 aa14.19□□□□□ -0.14
SMAD3-206ENST00000558739 TRPC6Q9Y210 931 aa14.19□□□□□ -0.14
SMAD3-206ENST00000558739 EXOC6BQ9Y2D4 811 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms