RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 ZNF148Q9UQR1 794 aa15.19■□□□□ 0.02
SPG11-210ENST00000558319 NCAPGQ9BPX3 1015 aa15.19■□□□□ 0.02
SPG11-210ENST00000558319 NBPF3Q9H094 633 aa15.19■□□□□ 0.02
SPG11-210ENST00000558319 TYW1Q9NV66 732 aaKnown RBP15.19■□□□□ 0.02
SPG11-210ENST00000558319 CLIC4Q9Y696 253 aa15.19■□□□□ 0.02
SPG11-210ENST00000558319 ANO4Q32M45 955 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 ZNF654Q8IZM8 581 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 HIPK4Q8NE63 616 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 A0A0D9SFI3 127 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 H7C0C1 242 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 CTNND1O60716 968 aaKnown RBP15.18■□□□□ 0.02
SPG11-210ENST00000558319 TNNC2P02585 160 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 ATP5OP48047 213 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 TRIP13Q15645 432 aaPredicted RBP15.18■□□□□ 0.02
SPG11-210ENST00000558319 NDUFA8P51970 172 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 TCP11X2Q5H9J9 407 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 HABP4Q5JVS0 413 aaKnown RBP15.18■□□□□ 0.02
SPG11-210ENST00000558319 TBC1D1Q86TI0 1168 aaPredicted RBP15.18■□□□□ 0.02
SPG11-210ENST00000558319 RFX6Q8HWS3 928 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 ZNF668Q96K58 619 aaPredicted RBP15.18■□□□□ 0.02
SPG11-210ENST00000558319 USP28Q96RU2 1077 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 ZSCAN10Q96SZ4 725 aaPredicted RBP15.18■□□□□ 0.02
SPG11-210ENST00000558319 KIAA0586Q9BVV6 1533 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 ARMCX5Q6P1M9 558 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 KCNV2Q8TDN2 545 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 MOSPD1Q9UJG1 213 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 PCDHA12Q9UN75 941 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 EPN1Q9Y6I3 576 aaPredicted RBP15.18■□□□□ 0.02
SPG11-210ENST00000558319 POLR2MP0CAP2 368 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 XRCC5P13010 732 aaKnown RBP15.18■□□□□ 0.02
SPG11-210ENST00000558319 RNASELQ05823 741 aaKnown RBP15.18■□□□□ 0.02
SPG11-210ENST00000558319 PLA2G4DQ86XP0 818 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 ABT1Q9ULW3 272 aaKnown RBP15.18■□□□□ 0.02
SPG11-210ENST00000558319 PCDHB4Q9Y5E5 795 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 SGK1O00141 431 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 CFLARO15519 480 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 LRRN2O75325 713 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 CASP14P31944 242 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 NNTQ13423 1086 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 ZBTB41Q5SVQ8 909 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 KRT80Q6KB66 452 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 GRAMD1CQ8IYS0 662 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 RABGGTAQ92696 567 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 CDCA7Q9BWT1 371 aaPredicted RBP15.18■□□□□ 0.02
SPG11-210ENST00000558319 PUS3Q9BZE2 481 aaKnown RBP15.18■□□□□ 0.02
SPG11-210ENST00000558319 EPS15L1Q9UBC2 864 aa15.18■□□□□ 0.02
SPG11-210ENST00000558319 SGSM2O43147 1006 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 BRD1O95696 1058 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 TCP1P17987 556 aaKnown RBP15.17■□□□□ 0.02
SPG11-210ENST00000558319 GOLGA8SH3BPF8 625 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 SYF2O95926 243 aaKnown RBP15.17■□□□□ 0.02
SPG11-210ENST00000558319 INHBAP08476 426 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 MRPS25P82663 173 aaKnown RBP15.17■□□□□ 0.02
SPG11-210ENST00000558319 HDLBPQ00341 1268 aaKnown RBP15.17■□□□□ 0.02
SPG11-210ENST00000558319 PARP10Q53GL7 1025 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 ADALQ6DHV7 355 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 CYP4F22Q6NT55 531 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 EXT2Q93063 718 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 MTRQ99707 1265 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 PALD1Q9ULE6 856 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 TRPM2O94759 1503 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 GPC4O75487 556 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 DPY19L2Q6NUT2 758 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 GANCQ8TET4 914 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 CEP19Q96LK0 163 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 SYCP2Q9BX26 1530 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 MSH2P43246 934 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 BFSP1Q12934 665 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 RPS6KC1Q96S38 1066 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.17■□□□□ 0.02
SPG11-210ENST00000558319 CDC23Q9UJX2 597 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 URB2Q14146 1524 aaKnown RBP15.17■□□□□ 0.02
SPG11-210ENST00000558319 MESDQ14696 234 aa15.17■□□□□ 0.02
SPG11-210ENST00000558319 TMEM191BP0C7N4 346 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 ALDH1B1P30837 517 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 CLCN6P51797 869 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 CDR2Q01850 454 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 GRAMD4Q6IC98 578 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 ZC3H18Q86VM9 953 aaKnown RBP15.16■□□□□ 0.02
SPG11-210ENST00000558319 H0Y3Z8 333 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 PLTPP55058 493 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 MCTP2Q6DN12 878 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 PARD6BQ9BYG5 372 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 DNAJC17Q9NVM6 304 aaKnown RBP15.16■□□□□ 0.02
SPG11-210ENST00000558319 MAST3O60307 1309 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 PRAMEF22A3QJZ6 481 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 NCF2P19878 526 aaPredicted RBP15.16■□□□□ 0.02
SPG11-210ENST00000558319 CHRNDQ07001 517 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 RBL2Q08999 1139 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 SFMBT1Q9UHJ3 866 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 NOVA2Q9UNW9 492 aaKnown RBP15.16■□□□□ 0.02
SPG11-210ENST00000558319 DNMBPQ6XZF7 1577 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 HEXIM1O94992 359 aaKnown RBP15.16■□□□□ 0.02
SPG11-210ENST00000558319 P4HA1P13674 534 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 CDC25AP30304 524 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 PDE6CP51160 858 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 ICA1Q05084 483 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 FBXO11Q86XK2 927 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 CENPKQ9BS16 269 aa15.16■□□□□ 0.02
SPG11-210ENST00000558319 POLD4Q9HCU8 107 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms