RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 RIC8AQ9NPQ8 531 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 USP40Q9NVE5 1235 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 OGFRQ9NZT2 677 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 CTNND2Q9UQB3 1225 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 JAG2Q9Y219 1238 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 PARP3Q9Y6F1 533 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 UBR3Q6ZT12 1888 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 LGALS16A8MUM7 142 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 WNT7AO00755 349 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 KIF5CO60282 957 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 CCNT1O60563 726 aaKnown RBP9.32□□□□□ -0.92
SPG11-209ENST00000558253 CCNE1P24864 410 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 PRCPP42785 496 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 USP11P51784 963 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 PRSS12P56730 875 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 DMTNQ08495 405 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 ZNF543Q08ER8 600 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 KARSQ15046 597 aaKnown RBP9.32□□□□□ -0.92
SPG11-209ENST00000558253 KRT31Q15323 416 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 CALCRLQ16602 461 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 KMT5BQ4FZB7 885 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 NAALADL2Q58DX5 795 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 NOM1Q5C9Z4 860 aaKnown RBP9.32□□□□□ -0.92
SPG11-209ENST00000558253 FIGNQ5HY92 759 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 FAM182BQ5T319 152 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 RBM26Q5T8P6 1007 aaKnown RBP9.32□□□□□ -0.92
SPG11-209ENST00000558253 STRIP1Q5VSL9 837 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 JAKMIP3Q5VZ66 844 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 USP17L2Q6R6M4 530 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 MOXD1Q6UVY6 613 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 ZNF662Q6ZS27 426 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 SV2BQ7L1I2 683 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 SLC44A5Q8NCS7 719 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 SUPT20HQ8NEM7 779 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 UBXN4Q92575 508 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 CUL5Q93034 780 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 MTMR8Q96EF0 704 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 MTMR9Q96QG7 549 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 MTRQ99707 1265 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 KANSL2Q9H9L4 492 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 EXOC1Q9NV70 894 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 ZNHIT6Q9NWK9 470 aaKnown RBP9.32□□□□□ -0.92
SPG11-209ENST00000558253 NYAP2Q9P242 653 aa9.32□□□□□ -0.92
SPG11-209ENST00000558253 ZNF215Q9UL58 517 aaPredicted RBP9.32□□□□□ -0.92
SPG11-209ENST00000558253 DDX60LQ5H9U9 1706 aaKnown RBP9.31□□□□□ -0.92
SPG11-209ENST00000558253 USP17L5A8MUK1 530 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 TULP1O00294 542 aaPredicted RBP9.31□□□□□ -0.92
SPG11-209ENST00000558253 KLRC4O43908 158 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 VEGFAP15692 232 aaPredicted RBP9.31□□□□□ -0.92
SPG11-209ENST00000558253 ADKP55263 362 aaKnown RBP9.31□□□□□ -0.92
SPG11-209ENST00000558253 GNG11P61952 73 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 CDK17Q00537 523 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 RBL2Q08999 1139 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 SLC35G1Q2M3R5 365 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 LETM2Q2VYF4 491 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 KRT79Q5XKE5 535 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 TXLNBQ8N3L3 684 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 EHBP1Q8NDI1 1231 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 OR8K1Q8NGG5 319 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 TBCKQ8TEA7 893 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 CDK5RAP3Q96JB5 506 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 PIGSQ96S52 555 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 IDI2Q9BXS1 227 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 EDEM3Q9BZQ6 932 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 TRIM9Q9C026 710 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 NT5C3AQ9H0P0 336 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 BLZF1Q9H2G9 400 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 TMEM60Q9H2L4 133 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 PI4KBQ9UBF8 816 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 LRWD1Q9UFC0 647 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 SERPINA10Q9UK55 444 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 ADGRG1Q9Y653 693 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 LTBP1Q14766 1721 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 KDM3AQ9Y4C1 1321 aa9.31□□□□□ -0.92
SPG11-209ENST00000558253 A0A1W2PQJ5 194 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 ZBTB5O15062 677 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 TRIM37O94972 964 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 FOSP01100 380 aaPredicted RBP9.3□□□□□ -0.92
SPG11-209ENST00000558253 GOLGA8HP0CJ92 632 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 PLCG1P19174 1290 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 STX17P56962 302 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 KRT83P78385 493 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 UBXN1Q04323 297 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 LRRC63Q05C16 580 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 BMS1Q14692 1282 aaKnown RBP9.3□□□□□ -0.92
SPG11-209ENST00000558253 TTI2Q6NXR4 508 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 CDC42EP5Q6NZY7 148 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 CCDC84Q86UT8 332 aaPredicted RBP9.3□□□□□ -0.92
SPG11-209ENST00000558253 CREBRFQ8IUR6 639 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 CCDC170Q8IYT3 715 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 MB21D1Q8N884 522 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 CEP112Q8N8E3 955 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 TTC13Q8NBP0 860 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 P2RX5Q93086 422 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 CNKSR1Q969H4 720 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 TRIM34Q9BYJ4 488 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 TSKSQ9UJT2 592 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 DDX41Q9UJV9 622 aaKnown RBP9.3□□□□□ -0.92
SPG11-209ENST00000558253 CAPN11Q9UMQ6 739 aa9.3□□□□□ -0.92
SPG11-209ENST00000558253 LUC7L2Q9Y383 392 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms