RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 VWA3BQ502W6 1294 aa4.78□□□□□ -1.64
GPHN-216ENST00000557678 POMZP3Q6PJE2 187 aa4.78□□□□□ -1.64
GPHN-216ENST00000557678 B3GNT8Q7Z7M8 397 aa4.78□□□□□ -1.64
GPHN-216ENST00000557678 SAPCD2Q86UD0 394 aa4.78□□□□□ -1.64
GPHN-216ENST00000557678 METTL16Q86W50 562 aaKnown RBP4.78□□□□□ -1.64
GPHN-216ENST00000557678 RASGRP4Q8TDF6 673 aa4.78□□□□□ -1.64
GPHN-216ENST00000557678 MRRFQ96E11 262 aaKnown RBP4.78□□□□□ -1.64
GPHN-216ENST00000557678 DDX11Q96FC9 970 aa4.78□□□□□ -1.64
GPHN-216ENST00000557678 TSPAN17Q96FV3 270 aa4.78□□□□□ -1.64
GPHN-216ENST00000557678 RCC1LQ96I51 464 aaKnown RBP4.78□□□□□ -1.64
GPHN-216ENST00000557678 GPRC5CQ9NQ84 441 aa4.78□□□□□ -1.64
GPHN-216ENST00000557678 SIT1Q9Y3P8 196 aa4.78□□□□□ -1.64
GPHN-216ENST00000557678 C7orf72A4D263 438 aa4.77□□□□□ -1.65
GPHN-216ENST00000557678 PRICKLE3O43900 615 aaPredicted RBP4.77□□□□□ -1.65
GPHN-216ENST00000557678 PPP1R11O60927 126 aaPredicted RBP4.77□□□□□ -1.65
GPHN-216ENST00000557678 PLS3P13797 630 aa4.77□□□□□ -1.65
GPHN-216ENST00000557678 CAP1Q01518 475 aa4.77□□□□□ -1.65
GPHN-216ENST00000557678 CACNB2Q08289 660 aaPredicted RBP4.77□□□□□ -1.65
GPHN-216ENST00000557678 TEX2Q8IWB9 1127 aa4.77□□□□□ -1.65
GPHN-216ENST00000557678 CARFQ8N187 725 aa4.77□□□□□ -1.65
GPHN-216ENST00000557678 BORCS6Q96GS4 357 aa4.77□□□□□ -1.65
GPHN-216ENST00000557678 SHDQ96IW2 340 aa4.77□□□□□ -1.65
GPHN-216ENST00000557678 NOX5Q96PH1 765 aa4.77□□□□□ -1.65
GPHN-216ENST00000557678 AP5M1Q9H0R1 490 aa4.77□□□□□ -1.65
GPHN-216ENST00000557678 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.77□□□□□ -1.65
GPHN-216ENST00000557678 NTMQ9P121 344 aa4.77□□□□□ -1.65
GPHN-216ENST00000557678 APEX2Q9UBZ4 518 aa4.77□□□□□ -1.65
GPHN-216ENST00000557678 K7ESM1 405 aa4.76□□□□□ -1.65
GPHN-216ENST00000557678 ADRB1P08588 477 aa4.76□□□□□ -1.65
GPHN-216ENST00000557678 CYP2C8P10632 490 aa4.76□□□□□ -1.65
GPHN-216ENST00000557678 VAMP1P23763 118 aa4.76□□□□□ -1.65
GPHN-216ENST00000557678 CNR2P34972 360 aa4.76□□□□□ -1.65
GPHN-216ENST00000557678 SARSP49591 514 aaKnown RBP4.76□□□□□ -1.65
GPHN-216ENST00000557678 HTRA3P83110 453 aa4.76□□□□□ -1.65
GPHN-216ENST00000557678 SPATS1Q496A3 300 aa4.76□□□□□ -1.65
GPHN-216ENST00000557678 CD300LDQ6UXZ3 194 aa4.76□□□□□ -1.65
GPHN-216ENST00000557678 DCP2Q8IU60 420 aaKnown RBP4.76□□□□□ -1.65
GPHN-216ENST00000557678 BVESQ8NE79 360 aa4.76□□□□□ -1.65
GPHN-216ENST00000557678 YIPF4Q9BSR8 244 aa4.76□□□□□ -1.65
GPHN-216ENST00000557678 MTA3Q9BTC8 594 aa4.76□□□□□ -1.65
GPHN-216ENST00000557678 ACBD3Q9H3P7 528 aa4.76□□□□□ -1.65
GPHN-216ENST00000557678 CCSER2Q9H7U1 834 aa4.76□□□□□ -1.65
GPHN-216ENST00000557678 LRP2BPQ9P2M1 347 aa4.76□□□□□ -1.65
GPHN-216ENST00000557678 PALD1Q9ULE6 856 aa4.76□□□□□ -1.65
GPHN-216ENST00000557678 SH3D21A4FU49 640 aa4.75□□□□□ -1.65
GPHN-216ENST00000557678 C22orf46C9J442 243 aa4.75□□□□□ -1.65
GPHN-216ENST00000557678 THBDP07204 575 aa4.75□□□□□ -1.65
GPHN-216ENST00000557678 GJA8P48165 433 aa4.75□□□□□ -1.65
GPHN-216ENST00000557678 CASP7P55210 303 aa4.75□□□□□ -1.65
GPHN-216ENST00000557678 RBM10P98175 930 aaKnown RBP4.75□□□□□ -1.65
GPHN-216ENST00000557678 GTF2IRD2BQ6EKJ0 949 aa4.75□□□□□ -1.65
GPHN-216ENST00000557678 GTF2IRD2Q86UP8 949 aa4.75□□□□□ -1.65
GPHN-216ENST00000557678 STK32CQ86UX6 486 aa4.75□□□□□ -1.65
GPHN-216ENST00000557678 FAM169BQ8N8A8 192 aa4.75□□□□□ -1.65
GPHN-216ENST00000557678 SEC16BQ96JE7 1060 aa4.75□□□□□ -1.65
GPHN-216ENST00000557678 LGR4Q9BXB1 951 aa4.75□□□□□ -1.65
GPHN-216ENST00000557678 EMC9Q9Y3B6 208 aa4.75□□□□□ -1.65
GPHN-216ENST00000557678 ECI1P42126 302 aa4.74□□□□□ -1.65
GPHN-216ENST00000557678 NCAPHQ15003 741 aa4.74□□□□□ -1.65
GPHN-216ENST00000557678 SV2CQ496J9 727 aa4.74□□□□□ -1.65
GPHN-216ENST00000557678 LARP1BQ659C4 914 aaKnown RBP4.74□□□□□ -1.65
GPHN-216ENST00000557678 ETV3LQ6ZN32 361 aa4.74□□□□□ -1.65
GPHN-216ENST00000557678 ZC3H18Q86VM9 953 aaKnown RBP4.74□□□□□ -1.65
GPHN-216ENST00000557678 CPA5Q8WXQ8 436 aa4.74□□□□□ -1.65
GPHN-216ENST00000557678 CHAMP1Q96JM3 812 aa4.74□□□□□ -1.65
GPHN-216ENST00000557678 MMP19Q99542 508 aa4.74□□□□□ -1.65
GPHN-216ENST00000557678 GPR20Q99678 358 aa4.74□□□□□ -1.65
GPHN-216ENST00000557678 STRIP2Q9ULQ0 834 aa4.74□□□□□ -1.65
GPHN-216ENST00000557678 MRVI1Q9Y6F6 885 aa4.74□□□□□ -1.65
GPHN-216ENST00000557678 SSBP05455 408 aaKnown RBP eCLIP4.73□□□□□ -1.65
GPHN-216ENST00000557678 FPR2P25090 351 aa4.73□□□□□ -1.65
GPHN-216ENST00000557678 KCNJ6P48051 423 aa4.73□□□□□ -1.65
GPHN-216ENST00000557678 RPL11P62913 178 aaKnown RBP4.73□□□□□ -1.65
GPHN-216ENST00000557678 ZNF827Q17R98 1081 aa4.73□□□□□ -1.65
GPHN-216ENST00000557678 INF2Q27J81 1249 aa4.73□□□□□ -1.65
GPHN-216ENST00000557678 ZFYVE27Q5T4F4 411 aa4.73□□□□□ -1.65
GPHN-216ENST00000557678 MBLAC2Q68D91 279 aa4.73□□□□□ -1.65
GPHN-216ENST00000557678 MILR1Q7Z6M3 343 aa4.73□□□□□ -1.65
GPHN-216ENST00000557678 GGNQ86UU5 652 aa4.73□□□□□ -1.65
GPHN-216ENST00000557678 TRIM59Q8IWR1 403 aa4.73□□□□□ -1.65
GPHN-216ENST00000557678 PLEKHO2Q8TD55 490 aa4.73□□□□□ -1.65
GPHN-216ENST00000557678 BTN2A2Q8WVV5 523 aa4.73□□□□□ -1.65
GPHN-216ENST00000557678 COPS5Q92905 334 aa4.73□□□□□ -1.65
GPHN-216ENST00000557678 TRMT2BQ96GJ1 504 aaKnown RBP4.73□□□□□ -1.65
GPHN-216ENST00000557678 TGIF2Q9GZN2 237 aa4.73□□□□□ -1.65
GPHN-216ENST00000557678 CAPN10Q9HC96 672 aa4.73□□□□□ -1.65
GPHN-216ENST00000557678 DUSP10Q9Y6W6 482 aa4.73□□□□□ -1.65
GPHN-216ENST00000557678 MEFVO15553 781 aaPredicted RBP4.72□□□□□ -1.65
GPHN-216ENST00000557678 MYO1BO43795 1136 aa4.72□□□□□ -1.65
GPHN-216ENST00000557678 NOBOXO60393 691 aa4.72□□□□□ -1.65
GPHN-216ENST00000557678 C8BP07358 591 aa4.72□□□□□ -1.65
GPHN-216ENST00000557678 SNRPB2P08579 225 aaKnown RBP4.72□□□□□ -1.65
GPHN-216ENST00000557678 INSRRP14616 1297 aa4.72□□□□□ -1.65
GPHN-216ENST00000557678 ZNF143P52747 638 aaPredicted RBP4.72□□□□□ -1.65
GPHN-216ENST00000557678 DLX2Q07687 328 aaPredicted RBP4.72□□□□□ -1.65
GPHN-216ENST00000557678 ZXDCQ2QGD7 858 aaPredicted RBP4.72□□□□□ -1.65
GPHN-216ENST00000557678 C6orf15Q6UXA7 325 aaPredicted RBP4.72□□□□□ -1.65
GPHN-216ENST00000557678 CEP68Q76N32 757 aa4.72□□□□□ -1.65
GPHN-216ENST00000557678 ZNF761Q86XN6 746 aaPredicted RBP4.72□□□□□ -1.65
GPHN-216ENST00000557678 VPS37DQ86XT2 251 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms