RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 RABGAP1Q9Y3P9 1069 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 SCN4AP35499 1836 aa14.08□□□□□ -0.16
SHMT2-233ENST00000557529 SLC26A4O43511 780 aa14.08□□□□□ -0.16
SHMT2-233ENST00000557529 GTPBP6O43824 516 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-233ENST00000557529 MYL1P05976 194 aa14.08□□□□□ -0.16
SHMT2-233ENST00000557529 TAL1P17542 331 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-233ENST00000557529 AFMP43652 599 aa14.08□□□□□ -0.16
SHMT2-233ENST00000557529 OAZ1P54368 228 aa14.08□□□□□ -0.16
SHMT2-233ENST00000557529 GHRHRQ02643 423 aa14.08□□□□□ -0.16
SHMT2-233ENST00000557529 KARSQ15046 597 aaKnown RBP14.08□□□□□ -0.16
SHMT2-233ENST00000557529 DPCR1Q3MIW9 517 aa14.08□□□□□ -0.16
SHMT2-233ENST00000557529 FCHSD1Q86WN1 690 aa14.08□□□□□ -0.16
SHMT2-233ENST00000557529 CALML4Q96GE6 196 aa14.08□□□□□ -0.16
SHMT2-233ENST00000557529 AGBL1Q96MI9 1066 aa14.08□□□□□ -0.16
SHMT2-233ENST00000557529 GSDMAQ96QA5 445 aa14.08□□□□□ -0.16
SHMT2-233ENST00000557529 P2RX7Q99572 595 aaKnown RBP14.08□□□□□ -0.16
SHMT2-233ENST00000557529 TTC12Q9H892 705 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-233ENST00000557529 DACH1Q9UI36 760 aa14.08□□□□□ -0.16
SHMT2-233ENST00000557529 POLR2AP24928 1970 aaKnown RBP14.07□□□□□ -0.16
SHMT2-233ENST00000557529 MYPNQ86TC9 1320 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 PP2D1A8MPX8 630 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 SMTNL1A8MU46 457 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 VWA5AO00534 786 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 CDC25AP30304 524 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 DSG3P32926 999 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 ZNF76P36508 570 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 HSD17B4P51659 736 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 TPM4P67936 248 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 DPYDQ12882 1025 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 DGKZQ13574 1117 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 COG2Q14746 738 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 GRAMD1CQ8IYS0 662 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 ANKRD13AQ8IZ07 590 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 MLKLQ8NB16 471 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 HAS1Q92839 578 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 RAVER2Q9HCJ3 691 aaKnown RBP14.07□□□□□ -0.16
SHMT2-233ENST00000557529 KCNMB3Q9NPA1 279 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 MAN1B1Q9UKM7 699 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 PCDHA12Q9UN75 941 aa14.07□□□□□ -0.16
SHMT2-233ENST00000557529 MYH7BA7E2Y1 1941 aa14.06□□□□□ -0.16
SHMT2-233ENST00000557529 PHIPQ8WWQ0 1821 aa14.06□□□□□ -0.16
SHMT2-233ENST00000557529 A0A087WWV3 80 aa14.06□□□□□ -0.16
SHMT2-233ENST00000557529 ALAS1P13196 640 aa14.06□□□□□ -0.16
SHMT2-233ENST00000557529 PPATQ06203 517 aa14.06□□□□□ -0.16
SHMT2-233ENST00000557529 SEMA3FQ13275 785 aa14.06□□□□□ -0.16
SHMT2-233ENST00000557529 MORC3Q14149 939 aa14.06□□□□□ -0.16
SHMT2-233ENST00000557529 EAPPQ56P03 285 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-233ENST00000557529 CT47A1Q5JQC4 288 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-233ENST00000557529 KRT79Q5XKE5 535 aa14.06□□□□□ -0.16
SHMT2-233ENST00000557529 CATSPERGQ6ZRH7 1159 aa14.06□□□□□ -0.16
SHMT2-233ENST00000557529 CPXCR1Q8N123 301 aa14.06□□□□□ -0.16
SHMT2-233ENST00000557529 CLEC4DQ8WXI8 215 aa14.06□□□□□ -0.16
SHMT2-233ENST00000557529 ATG4CQ96DT6 458 aa14.06□□□□□ -0.16
SHMT2-233ENST00000557529 FAM20AQ96MK3 541 aa14.06□□□□□ -0.16
SHMT2-233ENST00000557529 MAF1Q9H063 256 aa14.06□□□□□ -0.16
SHMT2-233ENST00000557529 RMND1Q9NWS8 449 aa14.06□□□□□ -0.16
SHMT2-233ENST00000557529 HOXC10Q9NYD6 342 aa14.06□□□□□ -0.16
SHMT2-233ENST00000557529 STK17AQ9UEE5 414 aa14.06□□□□□ -0.16
SHMT2-233ENST00000557529 ADAMTS5Q9UNA0 930 aa14.06□□□□□ -0.16
SHMT2-233ENST00000557529 STK24Q9Y6E0 443 aa14.06□□□□□ -0.16
SHMT2-233ENST00000557529 IKBKBO14920 756 aa14.05□□□□□ -0.16
SHMT2-233ENST00000557529 ADCY5O95622 1261 aa14.05□□□□□ -0.16
SHMT2-233ENST00000557529 PLCG1P19174 1290 aa14.05□□□□□ -0.16
SHMT2-233ENST00000557529 TTLL12Q14166 644 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-233ENST00000557529 PRR16Q569H4 304 aa14.05□□□□□ -0.16
SHMT2-233ENST00000557529 NAALADL2Q58DX5 795 aa14.05□□□□□ -0.16
SHMT2-233ENST00000557529 DLK2Q6UY11 383 aa14.05□□□□□ -0.16
SHMT2-233ENST00000557529 ARMC9Q7Z3E5 817 aa14.05□□□□□ -0.16
SHMT2-233ENST00000557529 ERO1BQ86YB8 467 aa14.05□□□□□ -0.16
SHMT2-233ENST00000557529 DHX40Q8IX18 779 aaKnown RBP14.05□□□□□ -0.16
SHMT2-233ENST00000557529 AOPEPQ8N6M6 819 aa14.05□□□□□ -0.16
SHMT2-233ENST00000557529 TBC1D5Q92609 795 aa14.05□□□□□ -0.16
SHMT2-233ENST00000557529 CDK5RAP3Q96JB5 506 aa14.05□□□□□ -0.16
SHMT2-233ENST00000557529 MMTAG2Q9BU76 263 aaKnown RBP14.05□□□□□ -0.16
SHMT2-233ENST00000557529 KDM3AQ9Y4C1 1321 aa14.04□□□□□ -0.16
SHMT2-233ENST00000557529 WDR90Q96KV7 1748 aa14.04□□□□□ -0.16
SHMT2-233ENST00000557529 PAPPA2Q9BXP8 1791 aa14.04□□□□□ -0.16
SHMT2-233ENST00000557529 SPDYE5A6NIY4 337 aa14.04□□□□□ -0.16
SHMT2-233ENST00000557529 CXCL11O14625 94 aa14.04□□□□□ -0.16
SHMT2-233ENST00000557529 ATP2A1O14983 1001 aa14.04□□□□□ -0.16
SHMT2-233ENST00000557529 PLCB2Q00722 1185 aa14.04□□□□□ -0.16
SHMT2-233ENST00000557529 AMPD3Q01432 767 aa14.04□□□□□ -0.16
SHMT2-233ENST00000557529 TKFCQ3LXA3 575 aa14.04□□□□□ -0.16
SHMT2-233ENST00000557529 ISM2Q6H9L7 571 aa14.04□□□□□ -0.16
SHMT2-233ENST00000557529 ETNPPLQ8TBG4 499 aa14.04□□□□□ -0.16
SHMT2-233ENST00000557529 SNX29Q8TEQ0 813 aa14.04□□□□□ -0.16
SHMT2-233ENST00000557529 LENG9Q96B70 501 aa14.04□□□□□ -0.16
SHMT2-233ENST00000557529 TRIM44Q96DX7 344 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-233ENST00000557529 KBTBD4Q9NVX7 518 aa14.04□□□□□ -0.16
SHMT2-233ENST00000557529 POTEMA6NI47 508 aa14.03□□□□□ -0.16
SHMT2-233ENST00000557529 UNCXA6NJT0 531 aa14.03□□□□□ -0.16
SHMT2-233ENST00000557529 POTECB2RU33 542 aa14.03□□□□□ -0.16
SHMT2-233ENST00000557529 FAM86B1E9PN63 330 aa14.03□□□□□ -0.16
SHMT2-233ENST00000557529 NFIBO00712 420 aa14.03□□□□□ -0.16
SHMT2-233ENST00000557529 FAM86B2P0C5J1 330 aa14.03□□□□□ -0.16
SHMT2-233ENST00000557529 SETQ01105 290 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-233ENST00000557529 SARM1Q6SZW1 724 aa14.03□□□□□ -0.16
SHMT2-233ENST00000557529 PROCA1Q8NCQ7 364 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-233ENST00000557529 REPS2Q8NFH8 660 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms