RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 PSMC6P62333 389 aa19.19■□□□□ 0.66
VSX1-207ENST00000557285 PWP2Q15269 919 aaKnown RBP19.19■□□□□ 0.66
VSX1-207ENST00000557285 SEPT14Q6ZU15 432 aa19.19■□□□□ 0.66
VSX1-207ENST00000557285 CMTR1Q8N1G2 835 aaKnown RBP19.19■□□□□ 0.66
VSX1-207ENST00000557285 RIOX1Q9H6W3 641 aa19.19■□□□□ 0.66
VSX1-207ENST00000557285 ELP1O95163 1332 aa19.19■□□□□ 0.66
VSX1-207ENST00000557285 MYL3P08590 195 aa19.18■□□□□ 0.66
VSX1-207ENST00000557285 TXNP10599 105 aaKnown RBP19.18■□□□□ 0.66
VSX1-207ENST00000557285 RAG1P15918 1043 aa19.18■□□□□ 0.66
VSX1-207ENST00000557285 ITGB8P26012 769 aa19.18■□□□□ 0.66
VSX1-207ENST00000557285 KIF5BP33176 963 aa19.18■□□□□ 0.66
VSX1-207ENST00000557285 FAAP100Q0VG06 881 aa19.18■□□□□ 0.66
VSX1-207ENST00000557285 SCFD2Q8WU76 684 aa19.18■□□□□ 0.66
VSX1-207ENST00000557285 PNMA6FA0A0J9YX94 578 aa19.17■□□□□ 0.66
VSX1-207ENST00000557285 RBM47A0AV96 593 aaKnown RBP19.17■□□□□ 0.66
VSX1-207ENST00000557285 ARVCFO00192 962 aa19.17■□□□□ 0.66
VSX1-207ENST00000557285 PLEKHA8P1O95397 391 aa19.17■□□□□ 0.66
VSX1-207ENST00000557285 MYCLP12524 364 aaPredicted RBP19.17■□□□□ 0.66
VSX1-207ENST00000557285 ANKRD33Q7Z3H0 272 aa19.17■□□□□ 0.66
VSX1-207ENST00000557285 FCHSD1Q86WN1 690 aa19.17■□□□□ 0.66
VSX1-207ENST00000557285 RASEFQ8IZ41 740 aa19.17■□□□□ 0.66
VSX1-207ENST00000557285 CCDC82Q8N4S0 544 aa19.17■□□□□ 0.66
VSX1-207ENST00000557285 NEK1Q96PY6 1258 aa19.17■□□□□ 0.66
VSX1-207ENST00000557285 PXMP2Q9NR77 195 aa19.17■□□□□ 0.66
VSX1-207ENST00000557285 Q9Y3F1 56 aa19.17■□□□□ 0.66
VSX1-207ENST00000557285 SLC12A7Q9Y666 1083 aa19.17■□□□□ 0.66
VSX1-207ENST00000557285 MROH7Q68CQ1 1323 aa19.17■□□□□ 0.66
VSX1-207ENST00000557285 KIAA1217Q5T5P2 1943 aa19.16■□□□□ 0.66
VSX1-207ENST00000557285 ARIH2O95376 493 aa19.16■□□□□ 0.66
VSX1-207ENST00000557285 HSD17B4P51659 736 aa19.16■□□□□ 0.66
VSX1-207ENST00000557285 CHMP4BP1P59074 171 aa19.16■□□□□ 0.66
VSX1-207ENST00000557285 NKX3-2P78367 333 aa19.16■□□□□ 0.66
VSX1-207ENST00000557285 ITGA7Q13683 1181 aa19.16■□□□□ 0.66
VSX1-207ENST00000557285 TTLL4Q14679 1199 aa19.16■□□□□ 0.66
VSX1-207ENST00000557285 STXBP2Q15833 593 aa19.16■□□□□ 0.66
VSX1-207ENST00000557285 LY6KQ17RY6 165 aa19.16■□□□□ 0.66
VSX1-207ENST00000557285 ADCK5Q3MIX3 580 aa19.16■□□□□ 0.66
VSX1-207ENST00000557285 MICU3Q86XE3 530 aa19.16■□□□□ 0.66
VSX1-207ENST00000557285 TMTC2Q8N394 836 aa19.16■□□□□ 0.66
VSX1-207ENST00000557285 PPP1R13LQ8WUF5 828 aa19.16■□□□□ 0.66
VSX1-207ENST00000557285 RRP36Q96EU6 259 aaKnown RBP19.16■□□□□ 0.66
VSX1-207ENST00000557285 MTA3Q9BTC8 594 aa19.16■□□□□ 0.66
VSX1-207ENST00000557285 SEC63Q9UGP8 760 aaKnown RBP19.16■□□□□ 0.66
VSX1-207ENST00000557285 LAMA2P24043 3122 aaKnown RBP19.15■□□□□ 0.66
VSX1-207ENST00000557285 hCG_1642624A0A1W2PR95 340 aa19.15■□□□□ 0.66
VSX1-207ENST00000557285 GCOM1H8Y6P7 765 aaPredicted RBP19.15■□□□□ 0.66
VSX1-207ENST00000557285 KIAA0355O15063 1070 aa19.15■□□□□ 0.66
VSX1-207ENST00000557285 POLR2MP0CAP2 368 aa19.15■□□□□ 0.66
VSX1-207ENST00000557285 CPT1AP50416 773 aa19.15■□□□□ 0.66
VSX1-207ENST00000557285 CDK7P50613 346 aa19.15■□□□□ 0.66
VSX1-207ENST00000557285 ZFP91Q96JP5 570 aaPredicted RBP19.15■□□□□ 0.66
VSX1-207ENST00000557285 TOX2Q96NM4 488 aa19.15■□□□□ 0.66
VSX1-207ENST00000557285 IWS1Q96ST2 819 aa19.15■□□□□ 0.66
VSX1-207ENST00000557285 NAP1L2Q9ULW6 460 aaPredicted RBP19.15■□□□□ 0.66
VSX1-207ENST00000557285 TLR3O15455 904 aaKnown RBP19.14■□□□□ 0.65
VSX1-207ENST00000557285 SORBS3O60504 671 aa19.14■□□□□ 0.65
VSX1-207ENST00000557285 CABYRO75952 493 aa19.14■□□□□ 0.65
VSX1-207ENST00000557285 NR3C2P08235 984 aa19.14■□□□□ 0.65
VSX1-207ENST00000557285 CALM1P0DP23 149 aa19.14■□□□□ 0.65
VSX1-207ENST00000557285 CALM2P0DP24 149 aa19.14■□□□□ 0.65
VSX1-207ENST00000557285 CALM3P0DP25 149 aa19.14■□□□□ 0.65
VSX1-207ENST00000557285 CPA1P15085 419 aa19.14■□□□□ 0.65
VSX1-207ENST00000557285 LIFRP42702 1097 aa19.14■□□□□ 0.65
VSX1-207ENST00000557285 TRAF1Q13077 416 aa19.14■□□□□ 0.65
VSX1-207ENST00000557285 SHHQ15465 462 aa19.14■□□□□ 0.65
VSX1-207ENST00000557285 C9orf50Q5SZB4 431 aa19.14■□□□□ 0.65
VSX1-207ENST00000557285 SYNE3Q6ZMZ3 975 aa19.14■□□□□ 0.65
VSX1-207ENST00000557285 FAM126BQ8IXS8 530 aa19.14■□□□□ 0.65
VSX1-207ENST00000557285 SRBD1Q8N5C6 995 aaKnown RBP19.14■□□□□ 0.65
VSX1-207ENST00000557285 MAP3K14Q99558 947 aa19.14■□□□□ 0.65
VSX1-207ENST00000557285 SPZ1Q9BXG8 430 aa19.14■□□□□ 0.65
VSX1-207ENST00000557285 PPP1R12CQ9BZL4 782 aa19.14■□□□□ 0.65
VSX1-207ENST00000557285 MAF1Q9H063 256 aa19.14■□□□□ 0.65
VSX1-207ENST00000557285 NKRFO15226 690 aaKnown RBP eCLIP19.13■□□□□ 0.65
VSX1-207ENST00000557285 GNAQP50148 359 aa19.13■□□□□ 0.65
VSX1-207ENST00000557285 BRDTQ58F21 947 aaPredicted RBP19.13■□□□□ 0.65
VSX1-207ENST00000557285 IL31RAQ8NI17 732 aa19.13■□□□□ 0.65
VSX1-207ENST00000557285 LZTS2Q9BRK4 669 aa19.13■□□□□ 0.65
VSX1-207ENST00000557285 TRPV6Q9H1D0 765 aa19.13■□□□□ 0.65
VSX1-207ENST00000557285 POLR3EQ9NVU0 708 aa19.13■□□□□ 0.65
VSX1-207ENST00000557285 TBX21Q9UL17 535 aa19.13■□□□□ 0.65
VSX1-207ENST00000557285 MRVI1Q9Y6F6 885 aa19.13■□□□□ 0.65
VSX1-207ENST00000557285 GRIN2DO15399 1336 aa19.13■□□□□ 0.65
VSX1-207ENST00000557285 EIF3JO75822 258 aaKnown RBP19.12■□□□□ 0.65
VSX1-207ENST00000557285 FGD1P98174 961 aa19.12■□□□□ 0.65
VSX1-207ENST00000557285 PURAQ00577 322 aaKnown RBP19.12■□□□□ 0.65
VSX1-207ENST00000557285 FPGSQ05932 587 aa19.12■□□□□ 0.65
VSX1-207ENST00000557285 KRT32Q14532 448 aa19.12■□□□□ 0.65
VSX1-207ENST00000557285 LRIT3Q3SXY7 679 aa19.12■□□□□ 0.65
VSX1-207ENST00000557285 FAM47CQ5HY64 1035 aa19.12■□□□□ 0.65
VSX1-207ENST00000557285 DHX32Q7L7V1 743 aaKnown RBP19.12■□□□□ 0.65
VSX1-207ENST00000557285 FANCBQ8NB91 859 aa19.12■□□□□ 0.65
VSX1-207ENST00000557285 AFG1LQ8WV93 481 aa19.12■□□□□ 0.65
VSX1-207ENST00000557285 PDCD2LQ9BRP1 358 aa19.12■□□□□ 0.65
VSX1-207ENST00000557285 MYH7BA7E2Y1 1941 aa19.12■□□□□ 0.65
VSX1-207ENST00000557285 TIMP1P01033 207 aa19.11■□□□□ 0.65
VSX1-207ENST00000557285 EPHB4P54760 987 aa19.11■□□□□ 0.65
VSX1-207ENST00000557285 PGM5Q15124 567 aa19.11■□□□□ 0.65
VSX1-207ENST00000557285 CCDC62Q6P9F0 684 aa19.11■□□□□ 0.65
VSX1-207ENST00000557285 JAKMIP1Q96N16 626 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms