RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ARHGEF28Q8N1W1 1705 aaKnown RBP5.66□□□□□ -1.5
SRP54-212ENST00000556992 OTOL1A6NHN0 477 aaPredicted RBP5.66□□□□□ -1.5
SRP54-212ENST00000556992 RPL10P27635 214 aaKnown RBP5.66□□□□□ -1.5
SRP54-212ENST00000556992 KRTAP10-2P60368 255 aa5.66□□□□□ -1.5
SRP54-212ENST00000556992 SRSF3P84103 164 aaKnown RBP5.66□□□□□ -1.5
SRP54-212ENST00000556992 NFIXQ14938 502 aa5.66□□□□□ -1.5
SRP54-212ENST00000556992 KIR3DS1Q14943 382 aa5.66□□□□□ -1.5
SRP54-212ENST00000556992 CLEC16AQ2KHT3 1053 aa5.66□□□□□ -1.5
SRP54-212ENST00000556992 ZNF385BQ569K4 471 aa5.66□□□□□ -1.5
SRP54-212ENST00000556992 SULT6B1Q6IMI4 303 aa5.66□□□□□ -1.5
SRP54-212ENST00000556992 ZDHHC14Q8IZN3 488 aa5.66□□□□□ -1.5
SRP54-212ENST00000556992 FEZF2Q8TBJ5 459 aa5.66□□□□□ -1.5
SRP54-212ENST00000556992 IFT57Q9NWB7 429 aa5.66□□□□□ -1.5
SRP54-212ENST00000556992 MBD1Q9UIS9 605 aaPredicted RBP5.66□□□□□ -1.5
SRP54-212ENST00000556992 NRXN3Q9Y4C0 1643 aa5.66□□□□□ -1.5
SRP54-212ENST00000556992 MYOM1P52179 1685 aa5.66□□□□□ -1.5
SRP54-212ENST00000556992 UBR1Q8IWV7 1749 aa5.65□□□□□ -1.5
SRP54-212ENST00000556992 FER1L4A9Z1Z3 1794 aa5.65□□□□□ -1.5
SRP54-212ENST00000556992 CEP170BQ9Y4F5 1589 aaPredicted RBP5.65□□□□□ -1.5
SRP54-212ENST00000556992 TCERG1O14776 1098 aaKnown RBP5.65□□□□□ -1.5
SRP54-212ENST00000556992 HTATSF1O43719 755 aaKnown RBP5.65□□□□□ -1.5
SRP54-212ENST00000556992 TOM1O60784 492 aa5.65□□□□□ -1.5
SRP54-212ENST00000556992 PRPF40AO75400 957 aaKnown RBP5.65□□□□□ -1.5
SRP54-212ENST00000556992 YARSP54577 528 aaKnown RBP5.65□□□□□ -1.5
SRP54-212ENST00000556992 EXOSC9Q06265 439 aaKnown RBP5.65□□□□□ -1.5
SRP54-212ENST00000556992 DUSP4Q13115 394 aa5.65□□□□□ -1.5
SRP54-212ENST00000556992 ALDH1L2Q3SY69 923 aa5.65□□□□□ -1.5
SRP54-212ENST00000556992 C20orf194Q5TEA3 1177 aa5.65□□□□□ -1.5
SRP54-212ENST00000556992 ZKSCAN2Q63HK3 967 aa5.65□□□□□ -1.5
SRP54-212ENST00000556992 NLRX1Q86UT6 975 aa5.65□□□□□ -1.5
SRP54-212ENST00000556992 SPPL2CQ8IUH8 684 aa5.65□□□□□ -1.5
SRP54-212ENST00000556992 ANKS4BQ8N8V4 417 aa5.65□□□□□ -1.5
SRP54-212ENST00000556992 PHC3Q8NDX5 983 aa5.65□□□□□ -1.5
SRP54-212ENST00000556992 LINC01599Q8WXQ3 324 aa5.65□□□□□ -1.5
SRP54-212ENST00000556992 FRAT1Q92837 279 aaPredicted RBP5.65□□□□□ -1.5
SRP54-212ENST00000556992 KIF2CQ99661 725 aa5.65□□□□□ -1.5
SRP54-212ENST00000556992 FOXP3Q9BZS1 431 aa5.65□□□□□ -1.5
SRP54-212ENST00000556992 CHMP4BQ9H444 224 aaKnown RBP5.65□□□□□ -1.5
SRP54-212ENST00000556992 REV1Q9UBZ9 1251 aa5.65□□□□□ -1.5
SRP54-212ENST00000556992 MAP3K19Q56UN5 1328 aa5.65□□□□□ -1.51
SRP54-212ENST00000556992 SBNO1A3KN83 1393 aa5.65□□□□□ -1.51
SRP54-212ENST00000556992 NCOA3Q9Y6Q9 1424 aa5.65□□□□□ -1.51
SRP54-212ENST00000556992 COL3A1P02461 1466 aaPredicted RBP5.64□□□□□ -1.51
SRP54-212ENST00000556992 RBM47A0AV96 593 aaKnown RBP5.64□□□□□ -1.51
SRP54-212ENST00000556992 OR14I1A6ND48 311 aa5.64□□□□□ -1.51
SRP54-212ENST00000556992 RFXAPO00287 272 aa5.64□□□□□ -1.51
SRP54-212ENST00000556992 FKTNO75072 461 aa5.64□□□□□ -1.51
SRP54-212ENST00000556992 F13A1P00488 732 aa5.64□□□□□ -1.51
SRP54-212ENST00000556992 ZNF853P0CG23 659 aa5.64□□□□□ -1.51
SRP54-212ENST00000556992 CHRNEQ04844 493 aa5.64□□□□□ -1.51
SRP54-212ENST00000556992 SKOR2Q2VWA4 1001 aaPredicted RBP5.64□□□□□ -1.51
SRP54-212ENST00000556992 CENPQQ7L2Z9 268 aaPredicted RBP5.64□□□□□ -1.51
SRP54-212ENST00000556992 KRT28Q7Z3Y7 464 aa5.64□□□□□ -1.51
SRP54-212ENST00000556992 PHACTR4Q8IZ21 702 aa5.64□□□□□ -1.51
SRP54-212ENST00000556992 SYT8Q8NBV8 401 aa5.64□□□□□ -1.51
SRP54-212ENST00000556992 RTF1Q92541 710 aaKnown RBP5.64□□□□□ -1.51
SRP54-212ENST00000556992 IP6K1Q92551 441 aa5.64□□□□□ -1.51
SRP54-212ENST00000556992 ARHGAP45Q92619 1136 aa5.64□□□□□ -1.51
SRP54-212ENST00000556992 TSR2Q969E8 191 aaKnown RBP5.64□□□□□ -1.51
SRP54-212ENST00000556992 FAM161BQ96MY7 647 aa5.64□□□□□ -1.51
SRP54-212ENST00000556992 FRMD6Q96NE9 622 aa5.64□□□□□ -1.51
SRP54-212ENST00000556992 ORAI2Q96SN7 254 aa5.64□□□□□ -1.51
SRP54-212ENST00000556992 XYLT2Q9H1B5 865 aa5.64□□□□□ -1.51
SRP54-212ENST00000556992 EPB41L4AQ9HCS5 686 aaPredicted RBP5.64□□□□□ -1.51
SRP54-212ENST00000556992 ZMYM5Q9UJ78 669 aa5.64□□□□□ -1.51
SRP54-212ENST00000556992 POLR3KQ9Y2Y1 108 aaPredicted RBP5.64□□□□□ -1.51
SRP54-212ENST00000556992 LAS1LQ9Y4W2 734 aaKnown RBP5.64□□□□□ -1.51
SRP54-212ENST00000556992 FANCIQ9NVI1 1328 aa5.64□□□□□ -1.51
SRP54-212ENST00000556992 FLT4P35916 1363 aa5.64□□□□□ -1.51
SRP54-212ENST00000556992 CDK12Q9NYV4 1490 aaPredicted RBP5.64□□□□□ -1.51
SRP54-212ENST00000556992 CHL1O00533 1208 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 CILPO75339 1184 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 BPNT1O95861 308 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 GCP02774 474 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 PF4P02776 101 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 SYN1P17600 705 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 HOXC9P31274 260 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 VIPR1P32241 457 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 TMEM201Q5SNT2 666 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 CEP128Q6ZU80 1094 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 TMC3Q7Z5M5 1100 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 SLFN12Q8IYM2 578 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 USHBP1Q8N6Y0 703 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 SSH1Q8WYL5 1049 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 PLCD4Q9BRC7 762 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 CHMP4AQ9BY43 222 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 CNTD2Q9H8S5 307 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 SMC4Q9NTJ3 1288 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 MINPP1Q9UNW1 487 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 IRAK3Q9Y616 596 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 OVOS2A0A0J9YW53 1432 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 OVOS2Q6IE36 1432 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 ADGRL3Q9HAR2 1447 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 ADGRB2O60241 1585 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 C3P01024 1663 aa5.63□□□□□ -1.51
SRP54-212ENST00000556992 FAM221AA4D161 298 aa5.62□□□□□ -1.51
SRP54-212ENST00000556992 VAMP4O75379 141 aa5.62□□□□□ -1.51
SRP54-212ENST00000556992 AFF3P51826 1226 aaKnown RBP5.62□□□□□ -1.51
SRP54-212ENST00000556992 FAM160A1Q05DH4 1040 aa5.62□□□□□ -1.51
SRP54-212ENST00000556992 NMIQ13287 307 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms