RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 NAP1L4Q99733 375 aaKnown RBP27■■□□□ 1.91
SIX4-203ENST00000556952 MGAMO43451 1857 aa26.99■■□□□ 1.91
SIX4-203ENST00000556952 MARCKSP29966 332 aaPredicted RBP26.99■■□□□ 1.91
SIX4-203ENST00000556952 MCM7P33993 719 aa26.99■■□□□ 1.91
SIX4-203ENST00000556952 HSD17B4P51659 736 aa26.99■■□□□ 1.91
SIX4-203ENST00000556952 LETM2Q2VYF4 491 aa26.99■■□□□ 1.91
SIX4-203ENST00000556952 SNRNP48Q6IEG0 339 aaKnown RBP26.99■■□□□ 1.91
SIX4-203ENST00000556952 KRI1Q8N9T8 703 aaKnown RBP26.99■■□□□ 1.91
SIX4-203ENST00000556952 MAF1Q9H063 256 aa26.99■■□□□ 1.91
SIX4-203ENST00000556952 LAD1O00515 517 aa26.98■■□□□ 1.91
SIX4-203ENST00000556952 CUTAO60888 179 aa26.98■■□□□ 1.91
SIX4-203ENST00000556952 FKTNO75072 461 aa26.98■■□□□ 1.91
SIX4-203ENST00000556952 BCRP11274 1271 aa26.98■■□□□ 1.91
SIX4-203ENST00000556952 CAP1Q01518 475 aa26.98■■□□□ 1.91
SIX4-203ENST00000556952 CCNT1O60563 726 aaKnown RBP26.97■■□□□ 1.91
SIX4-203ENST00000556952 PTPREP23469 700 aa26.97■■□□□ 1.91
SIX4-203ENST00000556952 HERVK_113P62684 666 aa26.97■■□□□ 1.91
SIX4-203ENST00000556952 PTGDRQ13258 359 aa26.97■■□□□ 1.91
SIX4-203ENST00000556952 AXDND1Q5T1B0 1012 aaPredicted RBP26.97■■□□□ 1.91
SIX4-203ENST00000556952 POTEEQ6S8J3 1075 aa26.97■■□□□ 1.91
SIX4-203ENST00000556952 FERMT2Q96AC1 680 aa26.97■■□□□ 1.91
SIX4-203ENST00000556952 TRERF1Q96PN7 1200 aa26.97■■□□□ 1.91
SIX4-203ENST00000556952 EHMT1Q9H9B1 1298 aa26.97■■□□□ 1.91
SIX4-203ENST00000556952 FBXO2Q9UK22 296 aaPredicted RBP26.97■■□□□ 1.91
SIX4-203ENST00000556952 SRPRBQ9Y5M8 271 aaKnown RBP26.97■■□□□ 1.91
SIX4-203ENST00000556952 NFIBO00712 420 aa26.97■■□□□ 1.91
SIX4-203ENST00000556952 PEX10O60683 326 aa26.97■■□□□ 1.91
SIX4-203ENST00000556952 GCFC2P16383 781 aaKnown RBP26.97■■□□□ 1.91
SIX4-203ENST00000556952 HOXA13P31271 388 aaPredicted RBP26.97■■□□□ 1.91
SIX4-203ENST00000556952 SREBF1P36956 1147 aa26.97■■□□□ 1.91
SIX4-203ENST00000556952 USP11P51784 963 aa26.97■■□□□ 1.91
SIX4-203ENST00000556952 SP3Q02447 781 aa26.97■■□□□ 1.91
SIX4-203ENST00000556952 ARL6IP4Q66PJ3 421 aaKnown RBP26.97■■□□□ 1.91
SIX4-203ENST00000556952 PPP4R3AQ6IN85 833 aa26.97■■□□□ 1.91
SIX4-203ENST00000556952 GTF3C2Q8WUA4 911 aaPredicted RBP26.97■■□□□ 1.91
SIX4-203ENST00000556952 RNF146Q9NTX7 359 aa26.97■■□□□ 1.91
SIX4-203ENST00000556952 STAT3P40763 770 aa26.96■■□□□ 1.91
SIX4-203ENST00000556952 CD99L2Q8TCZ2 262 aa26.96■■□□□ 1.91
SIX4-203ENST00000556952 ANP32EQ9BTT0 268 aa26.96■■□□□ 1.91
SIX4-203ENST00000556952 HOMER2Q9NSB8 354 aa26.96■■□□□ 1.91
SIX4-203ENST00000556952 NEMFO60524 1076 aa26.95■■□□□ 1.9
SIX4-203ENST00000556952 MUM1L1Q5H9M0 696 aa26.95■■□□□ 1.9
SIX4-203ENST00000556952 MOXD1Q6UVY6 613 aa26.95■■□□□ 1.9
SIX4-203ENST00000556952 ANKRD13CQ8N6S4 541 aa26.95■■□□□ 1.9
SIX4-203ENST00000556952 ZNF579Q8NAF0 562 aaKnown RBP26.95■■□□□ 1.9
SIX4-203ENST00000556952 CRYGNQ8WXF5 182 aa26.95■■□□□ 1.9
SIX4-203ENST00000556952 MRPS27Q92552 414 aaKnown RBP26.95■■□□□ 1.9
SIX4-203ENST00000556952 SYAP1Q96A49 352 aaPredicted RBP26.95■■□□□ 1.9
SIX4-203ENST00000556952 ECM2O94769 699 aaPredicted RBP26.94■■□□□ 1.9
SIX4-203ENST00000556952 TPRNQ4KMQ1 711 aa26.94■■□□□ 1.9
SIX4-203ENST00000556952 COL13A1Q5TAT6 717 aaPredicted RBP26.94■■□□□ 1.9
SIX4-203ENST00000556952 CCAR1Q8IX12 1150 aaKnown RBP26.94■■□□□ 1.9
SIX4-203ENST00000556952 C4orf32Q8N8J7 132 aa26.94■■□□□ 1.9
SIX4-203ENST00000556952 TBC1D5Q92609 795 aa26.94■■□□□ 1.9
SIX4-203ENST00000556952 TXNRD2Q9NNW7 524 aa26.94■■□□□ 1.9
SIX4-203ENST00000556952 RIPK3Q9Y572 518 aa26.94■■□□□ 1.9
SIX4-203ENST00000556952 CMA1P23946 247 aa26.93■■□□□ 1.9
SIX4-203ENST00000556952 PRPHP41219 470 aa26.93■■□□□ 1.9
SIX4-203ENST00000556952 ARHGAP4P98171 946 aa26.93■■□□□ 1.9
SIX4-203ENST00000556952 CCDC73Q6ZRK6 1079 aa26.93■■□□□ 1.9
SIX4-203ENST00000556952 ACAD9Q9H845 621 aa26.93■■□□□ 1.9
SIX4-203ENST00000556952 EDIL3O43854 480 aa26.92■■□□□ 1.9
SIX4-203ENST00000556952 CTGFP29279 349 aa26.92■■□□□ 1.9
SIX4-203ENST00000556952 GCLCP48506 637 aaPredicted RBP26.92■■□□□ 1.9
SIX4-203ENST00000556952 PLS1Q14651 629 aa26.92■■□□□ 1.9
SIX4-203ENST00000556952 FCHSD1Q86WN1 690 aa26.92■■□□□ 1.9
SIX4-203ENST00000556952 RIOX2Q8IUF8 465 aa26.92■■□□□ 1.9
SIX4-203ENST00000556952 FSIP1Q8NA03 581 aa26.92■■□□□ 1.9
SIX4-203ENST00000556952 CHST13Q8NET6 341 aa26.92■■□□□ 1.9
SIX4-203ENST00000556952 ARHGAP39Q9C0H5 1083 aa26.92■■□□□ 1.9
SIX4-203ENST00000556952 BTBD7Q9P203 1132 aa26.92■■□□□ 1.9
SIX4-203ENST00000556952 RBPJLQ9UBG7 517 aa26.92■■□□□ 1.9
SIX4-203ENST00000556952 RABGAP1Q9Y3P9 1069 aa26.92■■□□□ 1.9
SIX4-203ENST00000556952 LACTBP83111 547 aaPredicted RBP26.92■■□□□ 1.9
SIX4-203ENST00000556952 CAVIN1Q6NZI2 390 aaKnown RBP26.92■■□□□ 1.9
SIX4-203ENST00000556952 RNF207Q6ZRF8 634 aa26.92■■□□□ 1.9
SIX4-203ENST00000556952 SPATC1LQ9H0A9 340 aa26.92■■□□□ 1.9
SIX4-203ENST00000556952 FBXO40Q9UH90 709 aa26.92■■□□□ 1.9
SIX4-203ENST00000556952 CYP3A7-CYP3A51PA0A087WV96 503 aa26.91■■□□□ 1.9
SIX4-203ENST00000556952 TDP2O95551 362 aa26.91■■□□□ 1.9
SIX4-203ENST00000556952 CYP3A4P08684 503 aa26.91■■□□□ 1.9
SIX4-203ENST00000556952 OR52Z1P0C646 297 aa26.91■■□□□ 1.9
SIX4-203ENST00000556952 LIG1P18858 919 aa26.91■■□□□ 1.9
SIX4-203ENST00000556952 CYP3A7P24462 503 aa26.91■■□□□ 1.9
SIX4-203ENST00000556952 COPB2P35606 906 aa26.91■■□□□ 1.9
SIX4-203ENST00000556952 FAM110CQ1W6H9 321 aa26.91■■□□□ 1.9
SIX4-203ENST00000556952 RESP18Q5W5W9 173 aa26.91■■□□□ 1.9
SIX4-203ENST00000556952 ERO1AQ96HE7 468 aa26.91■■□□□ 1.9
SIX4-203ENST00000556952 CLIC6Q96NY7 704 aa26.91■■□□□ 1.9
SIX4-203ENST00000556952 PAGR1Q9BTK6 254 aa26.91■■□□□ 1.9
SIX4-203ENST00000556952 MRVI1Q9Y6F6 885 aa26.91■■□□□ 1.9
SIX4-203ENST00000556952 DOCK3Q8IZD9 2030 aa26.91■■□□□ 1.9
SIX4-203ENST00000556952 HTTP42858 3142 aa26.9■■□□□ 1.9
SIX4-203ENST00000556952 CNMDO75829 334 aa26.9■■□□□ 1.9
SIX4-203ENST00000556952 SHC4Q6S5L8 630 aa26.9■■□□□ 1.9
SIX4-203ENST00000556952 MBOAT7Q96N66 472 aa26.9■■□□□ 1.9
SIX4-203ENST00000556952 TMEM60Q9H2L4 133 aa26.9■■□□□ 1.9
SIX4-203ENST00000556952 GOLPH3LQ9H4A5 285 aa26.9■■□□□ 1.9
SIX4-203ENST00000556952 MORF4L1Q9UBU8 362 aa26.9■■□□□ 1.9
SIX4-203ENST00000556952 DDX25Q9UHL0 483 aaKnown RBP26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms