RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 USP17L18D6R9N7 530 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 USP17L22D6RA61 530 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 USP17L17D6RBQ6 530 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 USP17L19D6RCP7 530 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 USP17L20D6RJB6 530 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 H0YGN5 161 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 PPP1R12BO60237 982 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-244ENST00000556898 ZBTB48P10074 688 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-244ENST00000556898 CASTP20810 708 aaKnown RBP6.26□□□□□ -1.41
ATXN3-244ENST00000556898 SMTNP53814 917 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 ANTXR2P58335 489 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 JAG1P78504 1218 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 SP3Q02447 781 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 USP17L24Q0WX57 530 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 PTK7Q13308 1070 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 PRKG1Q13976 671 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 DOC2BQ14184 412 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 RRP1BQ14684 758 aaKnown RBP6.26□□□□□ -1.41
ATXN3-244ENST00000556898 SBK1Q52WX2 424 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 CRTC2Q53ET0 693 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-244ENST00000556898 FAM47AQ5JRC9 791 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 FIGNL1Q6PIW4 674 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 NLRP8Q86W28 1048 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 APOBEC3FQ8IUX4 373 aaKnown RBP6.26□□□□□ -1.41
ATXN3-244ENST00000556898 SLC17A8Q8NDX2 589 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 NEK1Q96PY6 1258 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 ZKSCAN3Q9BRR0 538 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 IDI2Q9BXS1 227 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 NIFKQ9BYG3 293 aaKnown RBP6.26□□□□□ -1.41
ATXN3-244ENST00000556898 DNAJC18Q9H819 358 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 VRTNQ9H8Y1 702 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 TOMM22Q9NS69 142 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 ARPP21Q9UBL0 812 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-244ENST00000556898 SERTAD1Q9UHV2 236 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 CTNNA3Q9UI47 895 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 ANGEL1Q9UNK9 670 aaKnown RBP6.26□□□□□ -1.41
ATXN3-244ENST00000556898 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.26□□□□□ -1.41
ATXN3-244ENST00000556898 CDK5RAP2Q96SN8 1893 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 ZMYM6O95789 1325 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-244ENST00000556898 EPB41L2O43491 1005 aaKnown RBP6.25□□□□□ -1.41
ATXN3-244ENST00000556898 NMT2O60551 498 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 ENTPD3O75355 529 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 LARGE1O95461 756 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 ZKSCAN1P17029 563 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-244ENST00000556898 RASA1P20936 1047 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 RPS6KB1P23443 525 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 CDK8P49336 464 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 NEK4P51957 841 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 PCBP4P57723 403 aaKnown RBP6.25□□□□□ -1.41
ATXN3-244ENST00000556898 ANAPC15P60006 121 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 EXOSC10Q01780 885 aaKnown RBP6.25□□□□□ -1.41
ATXN3-244ENST00000556898 ELOAQ14241 798 aaKnown RBP6.25□□□□□ -1.41
ATXN3-244ENST00000556898 RASA3Q14644 834 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 MTFR1Q15390 333 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 MAP3K11Q16584 847 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 AKNAD1Q5T1N1 836 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 GIMAP6Q6P9H5 292 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 TMED8Q6PL24 325 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-244ENST00000556898 MIGA2Q7L4E1 593 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 RAB11FIP4Q86YS3 637 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 ZSCAN29Q8IWY8 852 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-244ENST00000556898 MB21D2Q8IYB1 491 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-244ENST00000556898 C1orf216Q8TAB5 229 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 CD99L2Q8TCZ2 262 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 STAG1Q8WVM7 1258 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 FAM151AQ8WW52 585 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 IL17RAQ96F46 866 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 ZNF333Q96JL9 665 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 TEPSINQ96N21 525 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 TTC14Q96N46 770 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 TMOD2Q9NZR1 351 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-244ENST00000556898 ANAPC4Q9UJX5 808 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 BAZ2AQ9UIF9 1905 aaKnown RBP6.25□□□□□ -1.41
ATXN3-244ENST00000556898 SIPA1L1O43166 1804 aa6.25□□□□□ -1.41
ATXN3-244ENST00000556898 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-244ENST00000556898 M0R2N6 131 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 IGF2BP3O00425 579 aaKnown RBP eCLIP6.24□□□□□ -1.41
ATXN3-244ENST00000556898 KHNYNO15037 678 aaKnown RBP6.24□□□□□ -1.41
ATXN3-244ENST00000556898 PRC1O43663 620 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 MYO1BO43795 1136 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 RANBP6O60518 1105 aaKnown RBP6.24□□□□□ -1.41
ATXN3-244ENST00000556898 EIF5BO60841 1220 aaKnown RBP6.24□□□□□ -1.41
ATXN3-244ENST00000556898 ATG7O95352 703 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 FGRP09769 529 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 AKR1B1P15121 316 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 RFX1P22670 979 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 ADH6P28332 368 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 SHMT1P34896 483 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 AK2P54819 239 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 GABPAQ06546 454 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 CRHR2Q13324 411 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 TOB2Q14106 344 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-244ENST00000556898 RABEP1Q15276 862 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 SUPT20HL1Q3ZLR7 823 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 NBPF12Q5TAG4 269 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-244ENST00000556898 BLOC1S2Q6QNY1 142 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 MFSD6Q6ZSS7 791 aa6.24□□□□□ -1.41
ATXN3-244ENST00000556898 Q6ZUG5 572 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms