RNA–Protein interactions for RNA: ENST00000556647.1

SRSF5-216, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-216ENST00000556647 MAMSTRQ6ZN01 415 aa11.7□□□□□ -0.54
SRSF5-216ENST00000556647 EEPD1Q7L9B9 569 aa11.7□□□□□ -0.54
SRSF5-216ENST00000556647 FRMD5Q7Z6J6 570 aa11.7□□□□□ -0.54
SRSF5-216ENST00000556647 MRPL50Q8N5N7 158 aaKnown RBP11.7□□□□□ -0.54
SRSF5-216ENST00000556647 ZNF454Q8N9F8 522 aa11.7□□□□□ -0.54
SRSF5-216ENST00000556647 PIH1D3Q9NQM4 214 aaKnown RBP11.7□□□□□ -0.54
SRSF5-216ENST00000556647 PDGFCQ9NRA1 345 aa11.7□□□□□ -0.54
SRSF5-216ENST00000556647 NOD1Q9Y239 953 aa11.7□□□□□ -0.54
SRSF5-216ENST00000556647 CTDP1Q9Y5B0 961 aaPredicted RBP11.7□□□□□ -0.54
SRSF5-216ENST00000556647 NCK2O43639 380 aa11.69□□□□□ -0.54
SRSF5-216ENST00000556647 AKR1B1P15121 316 aa11.69□□□□□ -0.54
SRSF5-216ENST00000556647 ZAP70P43403 619 aa11.69□□□□□ -0.54
SRSF5-216ENST00000556647 SMAD4Q13485 552 aaKnown RBP11.69□□□□□ -0.54
SRSF5-216ENST00000556647 IQSEC1Q6DN90 963 aa11.69□□□□□ -0.54
SRSF5-216ENST00000556647 CNKSR3Q6P9H4 555 aa11.69□□□□□ -0.54
SRSF5-216ENST00000556647 CERS3Q8IU89 383 aa11.69□□□□□ -0.54
SRSF5-216ENST00000556647 ASIC4Q96FT7 647 aa11.69□□□□□ -0.54
SRSF5-216ENST00000556647 SCUBE2Q9NQ36 999 aa11.69□□□□□ -0.54
SRSF5-216ENST00000556647 POLR3EQ9NVU0 708 aa11.69□□□□□ -0.54
SRSF5-216ENST00000556647 MCM9Q9NXL9 1143 aa11.69□□□□□ -0.54
SRSF5-216ENST00000556647 INSL6Q9Y581 213 aa11.69□□□□□ -0.54
SRSF5-216ENST00000556647 DDX49Q9Y6V7 483 aaKnown RBP11.69□□□□□ -0.54
SRSF5-216ENST00000556647 MYO15AQ9UKN7 3530 aa11.69□□□□□ -0.54
SRSF5-216ENST00000556647 ABHD14A-ACY1A0A1B0GW23 586 aa11.68□□□□□ -0.54
SRSF5-216ENST00000556647 H3BNC9 293 aa11.68□□□□□ -0.54
SRSF5-216ENST00000556647 RBAK-RBAKDNI3L0D1 243 aa11.68□□□□□ -0.54
SRSF5-216ENST00000556647 IDH1O75874 414 aaKnown RBP11.68□□□□□ -0.54
SRSF5-216ENST00000556647 OATP04181 439 aa11.68□□□□□ -0.54
SRSF5-216ENST00000556647 EEF2P13639 858 aaKnown RBP11.68□□□□□ -0.54
SRSF5-216ENST00000556647 CHMP4BP1P59074 171 aa11.68□□□□□ -0.54
SRSF5-216ENST00000556647 PURAQ00577 322 aaKnown RBP11.68□□□□□ -0.54
SRSF5-216ENST00000556647 TCTN1Q2MV58 587 aa11.68□□□□□ -0.54
SRSF5-216ENST00000556647 LRRFIP1Q32MZ4 808 aaKnown RBP11.68□□□□□ -0.54
SRSF5-216ENST00000556647 C6orf132Q5T0Z8 1188 aa11.68□□□□□ -0.54
SRSF5-216ENST00000556647 SLF1Q9BQI6 1058 aa11.68□□□□□ -0.54
SRSF5-216ENST00000556647 IGFLR1Q9H665 355 aa11.68□□□□□ -0.54
SRSF5-216ENST00000556647 RAVER2Q9HCJ3 691 aaKnown RBP11.68□□□□□ -0.54
SRSF5-216ENST00000556647 GOPCQ9HD26 462 aa11.68□□□□□ -0.54
SRSF5-216ENST00000556647 CD207Q9UJ71 328 aa11.68□□□□□ -0.54
SRSF5-216ENST00000556647 Q9Y3F1 56 aa11.68□□□□□ -0.54
SRSF5-216ENST00000556647 MYO7AQ13402 2215 aa11.68□□□□□ -0.54
SRSF5-216ENST00000556647 ASB14A6NK59 587 aa11.67□□□□□ -0.54
SRSF5-216ENST00000556647 E9PSI1 815 aa11.67□□□□□ -0.54
SRSF5-216ENST00000556647 ZBED4O75132 1171 aa11.67□□□□□ -0.54
SRSF5-216ENST00000556647 PDGFBP01127 241 aaPredicted RBP11.67□□□□□ -0.54
SRSF5-216ENST00000556647 NUDT7P0C024 238 aa11.67□□□□□ -0.54
SRSF5-216ENST00000556647 HOXB3P14651 431 aaPredicted RBP11.67□□□□□ -0.54
SRSF5-216ENST00000556647 IKBKEQ14164 716 aa11.67□□□□□ -0.54
SRSF5-216ENST00000556647 GPNMBQ14956 572 aa11.67□□□□□ -0.54
SRSF5-216ENST00000556647 CTC1Q2NKJ3 1217 aa11.67□□□□□ -0.54
SRSF5-216ENST00000556647 ARSIQ5FYB1 569 aa11.67□□□□□ -0.54
SRSF5-216ENST00000556647 CCDC158Q5M9N0 1113 aa11.67□□□□□ -0.54
SRSF5-216ENST00000556647 KIAA1211Q6ZU35 1233 aa11.67□□□□□ -0.54
SRSF5-216ENST00000556647 FBXO16Q8IX29 292 aaPredicted RBP11.67□□□□□ -0.54
SRSF5-216ENST00000556647 DYNLL2Q96FJ2 89 aa11.67□□□□□ -0.54
SRSF5-216ENST00000556647 SAMD11Q96NU1 681 aa11.67□□□□□ -0.54
SRSF5-216ENST00000556647 NUP88Q99567 741 aaPredicted RBP11.67□□□□□ -0.54
SRSF5-216ENST00000556647 MTG1Q9BT17 334 aaPredicted RBP11.67□□□□□ -0.54
SRSF5-216ENST00000556647 HOMER2Q9NSB8 354 aa11.67□□□□□ -0.54
SRSF5-216ENST00000556647 LOC730098B7Z3J9 87 aa11.66□□□□□ -0.54
SRSF5-216ENST00000556647 SRGAP3O43295 1099 aa11.66□□□□□ -0.54
SRSF5-216ENST00000556647 TBX10O75333 385 aa11.66□□□□□ -0.54
SRSF5-216ENST00000556647 CYP2D6P10635 497 aa11.66□□□□□ -0.54
SRSF5-216ENST00000556647 HYAL1Q12794 435 aa11.66□□□□□ -0.54
SRSF5-216ENST00000556647 COL9A2Q14055 689 aaPredicted RBP11.66□□□□□ -0.54
SRSF5-216ENST00000556647 MCTP2Q6DN12 878 aa11.66□□□□□ -0.54
SRSF5-216ENST00000556647 TAPT1Q6NXT6 567 aa11.66□□□□□ -0.54
SRSF5-216ENST00000556647 ZNF710Q8N1W2 664 aa11.66□□□□□ -0.54
SRSF5-216ENST00000556647 CCDC155Q8N6L0 562 aa11.66□□□□□ -0.54
SRSF5-216ENST00000556647 CHST13Q8NET6 341 aa11.66□□□□□ -0.54
SRSF5-216ENST00000556647 AFAP1L1Q8TED9 768 aa11.66□□□□□ -0.54
SRSF5-216ENST00000556647 PRKRIP1Q9H875 184 aaPredicted RBP11.66□□□□□ -0.54
SRSF5-216ENST00000556647 GPCPD1Q9NPB8 672 aa11.66□□□□□ -0.54
SRSF5-216ENST00000556647 FBXO40Q9UH90 709 aa11.66□□□□□ -0.54
SRSF5-216ENST00000556647 HDAC5Q9UQL6 1122 aa11.66□□□□□ -0.54
SRSF5-216ENST00000556647 MYH8P13535 1937 aa11.65□□□□□ -0.54
SRSF5-216ENST00000556647 LINC01565O15544 149 aa11.65□□□□□ -0.54
SRSF5-216ENST00000556647 NBNO60934 754 aa11.65□□□□□ -0.54
SRSF5-216ENST00000556647 EFCAB14O75071 495 aa11.65□□□□□ -0.54
SRSF5-216ENST00000556647 CSPG5O95196 566 aa11.65□□□□□ -0.54
SRSF5-216ENST00000556647 SELPP16109 830 aa11.65□□□□□ -0.54
SRSF5-216ENST00000556647 GTF2F1P35269 517 aaKnown RBP eCLIP11.65□□□□□ -0.544e-70■■■■□ 21.7
SRSF5-216ENST00000556647 PTGISQ16647 500 aa11.65□□□□□ -0.54
SRSF5-216ENST00000556647 NFRKBQ6P4R8 1299 aa11.65□□□□□ -0.54
SRSF5-216ENST00000556647 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.65□□□□□ -0.542e-8■■□□□ 11.4
SRSF5-216ENST00000556647 LRRC8DQ7L1W4 858 aa11.65□□□□□ -0.54
SRSF5-216ENST00000556647 TMEM192Q8IY95 271 aa11.65□□□□□ -0.54
SRSF5-216ENST00000556647 MYOCDQ8IZQ8 938 aa11.65□□□□□ -0.54
SRSF5-216ENST00000556647 FAM133AQ8N9E0 248 aa11.65□□□□□ -0.54
SRSF5-216ENST00000556647 PRPF38AQ8NAV1 312 aaKnown RBP11.65□□□□□ -0.54
SRSF5-216ENST00000556647 KIFC2Q96AC6 838 aa11.65□□□□□ -0.54
SRSF5-216ENST00000556647 RIPOR3Q96MK2 946 aa11.65□□□□□ -0.54
SRSF5-216ENST00000556647 SWAP70Q9UH65 585 aa11.65□□□□□ -0.54
SRSF5-216ENST00000556647 COG6Q9Y2V7 657 aa11.65□□□□□ -0.54
SRSF5-216ENST00000556647 NAV1Q8NEY1 1877 aa11.64□□□□□ -0.55
SRSF5-216ENST00000556647 USP17L12C9JPN9 530 aa11.64□□□□□ -0.55
SRSF5-216ENST00000556647 USP17L21D6R901 530 aa11.64□□□□□ -0.55
SRSF5-216ENST00000556647 ATP2A1O14983 1001 aa11.64□□□□□ -0.55
SRSF5-216ENST00000556647 IGSF3O75054 1194 aa11.64□□□□□ -0.55
SRSF5-216ENST00000556647 NDUFV1P49821 464 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms