RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 DHX38Q92620 1227 aaKnown RBP5.22□□□□□ -1.57
ATXN3-242ENST00000556644 NSUN4Q96CB9 384 aaKnown RBP5.22□□□□□ -1.57
ATXN3-242ENST00000556644 SEZ6LQ9BYH1 1024 aa5.22□□□□□ -1.57
ATXN3-242ENST00000556644 PARD6AQ9NPB6 346 aa5.22□□□□□ -1.57
ATXN3-242ENST00000556644 ZNF214Q9UL59 606 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-242ENST00000556644 RIPK3Q9Y572 518 aa5.22□□□□□ -1.57
ATXN3-242ENST00000556644 NLRC5Q86WI3 1866 aa5.22□□□□□ -1.57
ATXN3-242ENST00000556644 CNOT1A5YKK6 2376 aaKnown RBP5.21□□□□□ -1.57
ATXN3-242ENST00000556644 SRRM3A6NNA2 597 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-242ENST00000556644 C2CD4DB7Z1M9 353 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 EYA2O00167 538 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 TAF4O00268 1085 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 STK25O00506 426 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 RAD21O60216 631 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 CXCL10P02778 98 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 LDHCP07864 332 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 SP9P0CG40 484 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 ATF7P17544 494 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-242ENST00000556644 DNAJB1P25685 340 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 MCAMP43121 646 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 RBM25P49756 843 aaKnown RBP5.21□□□□□ -1.58
ATXN3-242ENST00000556644 GSTO1P78417 241 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 PURAQ00577 322 aaKnown RBP5.21□□□□□ -1.58
ATXN3-242ENST00000556644 CNTN2Q02246 1040 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 CAMK1Q14012 370 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 PTGISQ16647 500 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 SOWAHCQ53LP3 525 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-242ENST00000556644 SPECC1Q5M775 1068 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 N4BP2L1Q5TBK1 243 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-242ENST00000556644 SNRNP48Q6IEG0 339 aaKnown RBP5.21□□□□□ -1.58
ATXN3-242ENST00000556644 TATDN1Q6P1N9 297 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 ZC3H14Q6PJT7 736 aaKnown RBP5.21□□□□□ -1.58
ATXN3-242ENST00000556644 SLC4A10Q6U841 1118 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 UNQ6494/PRO21346Q6UXR6 183 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 VN1R2Q8NFZ6 395 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 AFAP1L1Q8TED9 768 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 SLC39A7Q92504 469 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 SUSD6Q92537 303 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 HNRNPABQ99729 332 aaKnown RBP5.21□□□□□ -1.58
ATXN3-242ENST00000556644 NOL10Q9BSC4 688 aaKnown RBP5.21□□□□□ -1.58
ATXN3-242ENST00000556644 C11orf84Q9BUA3 381 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-242ENST00000556644 ERVK-5Q9HDB9 667 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 CABP5Q9NP86 173 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.21□□□□□ -1.58
ATXN3-242ENST00000556644 TRIP12Q14669 1992 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-242ENST00000556644 MICAL3Q7RTP6 2002 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 COL4A3Q01955 1670 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 BPTFQ12830 3046 aa5.21□□□□□ -1.58
ATXN3-242ENST00000556644 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-242ENST00000556644 VWA5AO00534 786 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 PER2O15055 1255 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 KINO60870 393 aaKnown RBP5.2□□□□□ -1.58
ATXN3-242ENST00000556644 MAP4K4O95819 1239 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-242ENST00000556644 MMP1P03956 469 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 RFX1P22670 979 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 SHMT1P34896 483 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 MBTPS1Q14703 1052 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 LRRFIP1Q32MZ4 808 aaKnown RBP5.2□□□□□ -1.58
ATXN3-242ENST00000556644 TWISTNBQ3B726 338 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-242ENST00000556644 RABL6Q3YEC7 729 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-242ENST00000556644 ATF7IPQ6VMQ6 1270 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 ATG9AQ7Z3C6 839 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 ZNF467Q7Z7K2 595 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-242ENST00000556644 ADGRA1Q86SQ6 560 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 CPXCR1Q8N123 301 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 SIX5Q8N196 739 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 ANKRD35Q8N283 1001 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 FIBCD1Q8N539 461 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 CCDC155Q8N6L0 562 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 REPS2Q8NFH8 660 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 RUNDC1Q96C34 613 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 YTHDC1Q96MU7 727 aaKnown RBP5.2□□□□□ -1.58
ATXN3-242ENST00000556644 CTAGE1Q96RT6 745 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 MTG1Q9BT17 334 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-242ENST00000556644 IFIH1Q9BYX4 1025 aaKnown RBP5.2□□□□□ -1.58
ATXN3-242ENST00000556644 LMAN2LQ9H0V9 348 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 POLR3EQ9NVU0 708 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 FBXL21Q9UKT6 434 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 MYO10Q9HD67 2058 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 PARP14Q460N5 1801 aa5.2□□□□□ -1.58
ATXN3-242ENST00000556644 USP9XQ93008 2570 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-242ENST00000556644 SLC30A4O14863 429 aa5.19□□□□□ -1.58
ATXN3-242ENST00000556644 EFCAB14O75071 495 aa5.19□□□□□ -1.58
ATXN3-242ENST00000556644 WEE2P0C1S8 567 aa5.19□□□□□ -1.58
ATXN3-242ENST00000556644 LINC00271P0C7V0 271 aa5.19□□□□□ -1.58
ATXN3-242ENST00000556644 C7P10643 843 aa5.19□□□□□ -1.58
ATXN3-242ENST00000556644 CKBP12277 381 aa5.19□□□□□ -1.58
ATXN3-242ENST00000556644 SPINK2P20155 84 aa5.19□□□□□ -1.58
ATXN3-242ENST00000556644 TGM1P22735 817 aa5.19□□□□□ -1.58
ATXN3-242ENST00000556644 BMPR1AP36894 532 aa5.19□□□□□ -1.58
ATXN3-242ENST00000556644 DYNLL1P63167 89 aaKnown RBP5.19□□□□□ -1.58
ATXN3-242ENST00000556644 LPAL2Q16609 132 aa5.19□□□□□ -1.58
ATXN3-242ENST00000556644 FAM83BQ5T0W9 1011 aa5.19□□□□□ -1.58
ATXN3-242ENST00000556644 GDF6Q6KF10 455 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-242ENST00000556644 MAGEB6Q8N7X4 407 aa5.19□□□□□ -1.58
ATXN3-242ENST00000556644 DBF4BQ8NFT6 615 aa5.19□□□□□ -1.58
ATXN3-242ENST00000556644 CAGE1Q8TC20 777 aa5.19□□□□□ -1.58
ATXN3-242ENST00000556644 ADAM32Q8TC27 787 aa5.19□□□□□ -1.58
ATXN3-242ENST00000556644 WNT8BQ93098 351 aa5.19□□□□□ -1.58
ATXN3-242ENST00000556644 PPP2R3CQ969Q6 453 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms