RNA–Protein interactions for RNA: ENST00000556192.1

RALGAPA1-213, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 5

Gene RALGAPA1, Length 480 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-213	ENST00000556192	SLC27A2	O14975	620 aa		27.97	■■■□□ 2.07
RALGAPA1-213	ENST00000556192	PURA	Q00577	322 aa	Known RBP	27.97	■■■□□ 2.07
RALGAPA1-213	ENST00000556192	BMP2KL	Q5H9B9	411 aa		27.97	■■■□□ 2.07
RALGAPA1-213	ENST00000556192	HOMER1	Q86YM7	354 aa		27.97	■■■□□ 2.07
RALGAPA1-213	ENST00000556192	PIGS	Q96S52	555 aa		27.97	■■■□□ 2.07
RALGAPA1-213	ENST00000556192	UMODL1	Q5DID0	1318 aa		27.96	■■■□□ 2.07
RALGAPA1-213	ENST00000556192	ERICH2	A1L162	156 aa		27.96	■■■□□ 2.07
RALGAPA1-213	ENST00000556192	CCDC62	Q6P9F0	684 aa		27.96	■■■□□ 2.07
RALGAPA1-213	ENST00000556192	MCF2L2	Q86YR7	1114 aa		27.96	■■■□□ 2.07
RALGAPA1-213	ENST00000556192	RMDN3	Q96TC7	470 aa		27.96	■■■□□ 2.07
RALGAPA1-213	ENST00000556192	MYL10	Q9BUA6	226 aa		27.96	■■■□□ 2.07
RALGAPA1-213	ENST00000556192	PPP1R12C	Q9BZL4	782 aa		27.96	■■■□□ 2.07
RALGAPA1-213	ENST00000556192	ZEB2	O60315	1214 aa		27.95	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	B4GALT4	O60513	344 aa		27.95	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	CFB	P00751	764 aa		27.95	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	EIF2AK2	P19525	551 aa	Known RBP	27.95	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	MFSD5	Q6N075	450 aa		27.95	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	NSUN6	Q8TEA1	469 aa	Known RBP	27.95	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	MPHOSPH6	Q99547	160 aa	Known RBP	27.95	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	TRPV6	Q9H1D0	765 aa		27.95	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	PXMP2	Q9NR77	195 aa		27.95	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	CDH23	Q9H251	3354 aa		27.94	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	TLR3	O15455	904 aa	Known RBP	27.94	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	TXN	P10599	105 aa	Known RBP	27.94	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	SART3	Q15020	963 aa	Known RBP	27.94	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	NECTIN1	Q15223	517 aa		27.94	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	C16orf59	Q7L2K0	433 aa		27.94	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	PPP1R13L	Q8WUF5	828 aa		27.94	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	PCDHA1	Q9Y5I3	950 aa		27.94	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	NKRF	O15226	690 aa	Known RBP eCLIP	27.93	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	PRC1	O43663	620 aa		27.93	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	MYL3	P08590	195 aa		27.93	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	CSF2RA	P15509	400 aa		27.93	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	CYP2C18	P33260	490 aa		27.93	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	CPT1A	P50416	773 aa		27.93	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	CREB3L3	Q68CJ9	461 aa		27.93	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	ZNF654	Q8IZM8	581 aa		27.93	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	RNPC3	Q96LT9	517 aa	Known RBP	27.93	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	27.93	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	POLR3E	Q9NVU0	708 aa		27.93	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	MYH7B	A7E2Y1	1941 aa		27.92	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	TANC1	Q9C0D5	1861 aa		27.92	■■■□□ 2.06
RALGAPA1-213	ENST00000556192		A6NJR5	290 aa		27.92	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	SH2B2	O14492	632 aa	Predicted RBP	27.92	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	HOXA13	P31271	388 aa	Predicted RBP	27.92	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	LY6K	Q17RY6	165 aa		27.92	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	SEPT14	Q6ZU15	432 aa		27.92	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	IL31RA	Q8NI17	732 aa		27.92	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	IWS1	Q96ST2	819 aa		27.92	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	27.92	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	ANO2	Q9NQ90	1003 aa		27.92	■■■□□ 2.06
RALGAPA1-213	ENST00000556192		B4DLN1	442 aa		27.91	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	MRPL12	P52815	198 aa	Known RBP	27.91	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	ARHGAP1	Q07960	439 aa		27.91	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	TTLL4	Q14679	1199 aa		27.91	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	ARHGEF16	Q5VV41	709 aa		27.91	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	FAM109B	Q6ICB4	259 aa	Predicted RBP	27.91	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	CATIP	Q7Z7H3	387 aa		27.91	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	GUCD1	Q96NT3	240 aa		27.91	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	STXBP2	Q15833	593 aa		27.9	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	MTG1	Q9BT17	334 aa	Predicted RBP	27.9	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	NOC4L	Q9BVI4	516 aa	Known RBP	27.9	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	WNT8A	Q9H1J5	351 aa		27.9	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	HIPK3	Q9H422	1215 aa		27.9	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	SCN5A	Q14524	2016 aa		27.9	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	GBF1	Q92538	1859 aa		27.89	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	PNMA6F	A0A0J9YX94	578 aa		27.89	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	RGS20	O76081	388 aa		27.89	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	DDAH1	O94760	285 aa		27.89	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	NR3C2	P08235	984 aa		27.89	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	SMAD3	P84022	425 aa	Known RBP	27.89	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	TMEM240	Q5SV17	173 aa		27.89	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	PIBF1	Q8WXW3	757 aa		27.89	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	FAM161B	Q96MY7	647 aa		27.89	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	PDCD2L	Q9BRP1	358 aa		27.89	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	TRMT13	Q9NUP7	481 aa	Known RBP	27.89	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	EYS	Q5T1H1	3165 aa		27.89	■■■□□ 2.06
RALGAPA1-213	ENST00000556192	PLEKHA8P1	O95397	391 aa		27.88	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	ACR	P10323	421 aa		27.88	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	MCM5	P33992	734 aa		27.88	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	PPIG	Q13427	754 aa	Known RBP eCLIP	27.88	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	CASC1	Q6TDU7	716 aa		27.88	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	AFG1L	Q8WV93	481 aa		27.88	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	VWCE	Q96DN2	955 aa		27.88	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	MAP3K14	Q99558	947 aa		27.88	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	MTA3	Q9BTC8	594 aa		27.88	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	LRRC2	Q9BYS8	371 aa		27.88	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	DOCK5	Q9H7D0	1870 aa		27.87	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	MMP3	P08254	477 aa		27.87	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	RXRA	P19793	462 aa		27.87	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	NBPF20	Q3BBV1	942 aa		27.87	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	SPZ1	Q9BXG8	430 aa		27.87	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	SEZ6L	Q9BYH1	1024 aa		27.87	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	PGM5	Q15124	567 aa		27.86	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	RASIP1	Q5U651	963 aa		27.86	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	RAB11FIP4	Q86YS3	637 aa		27.86	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	TMEM199	Q8N511	208 aa		27.86	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	TMEM87B	Q96K49	555 aa		27.86	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	TTYH1	Q9H313	450 aa	Predicted RBP	27.86	■■■□□ 2.05
RALGAPA1-213	ENST00000556192	DDX41	Q9UJV9	622 aa	Known RBP	27.86	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms