RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 ZYXQ15942 572 aaKnown RBP16.59■□□□□ 0.25
VPS33B-205ENST00000556096 RRAGDQ9NQL2 400 aaPredicted RBP16.59■□□□□ 0.25
VPS33B-205ENST00000556096 PAPPA2Q9BXP8 1791 aa16.59■□□□□ 0.25
VPS33B-205ENST00000556096 OPLAHO14841 1288 aa16.59■□□□□ 0.25
VPS33B-205ENST00000556096 WDR46O15213 610 aaKnown RBP16.59■□□□□ 0.25
VPS33B-205ENST00000556096 ERCC5P28715 1186 aaPredicted RBP16.59■□□□□ 0.25
VPS33B-205ENST00000556096 MOB2Q70IA6 237 aa16.59■□□□□ 0.25
VPS33B-205ENST00000556096 RASSF8Q8NHQ8 419 aa16.59■□□□□ 0.25
VPS33B-205ENST00000556096 KIFC2Q96AC6 838 aa16.59■□□□□ 0.25
VPS33B-205ENST00000556096 FEZ1Q99689 392 aa16.59■□□□□ 0.25
VPS33B-205ENST00000556096 KBTBD4Q9NVX7 518 aa16.59■□□□□ 0.25
VPS33B-205ENST00000556096 MYH7BA7E2Y1 1941 aa16.58■□□□□ 0.24
VPS33B-205ENST00000556096 CELF2O95319 508 aaKnown RBP16.58■□□□□ 0.24
VPS33B-205ENST00000556096 CCDC84Q86UT8 332 aaPredicted RBP16.58■□□□□ 0.24
VPS33B-205ENST00000556096 ENOX1Q8TC92 643 aaKnown RBP16.58■□□□□ 0.24
VPS33B-205ENST00000556096 HAS1Q92839 578 aa16.58■□□□□ 0.24
VPS33B-205ENST00000556096 MMTAG2Q9BU76 263 aaKnown RBP16.58■□□□□ 0.24
VPS33B-205ENST00000556096 RMND1Q9NWS8 449 aa16.58■□□□□ 0.24
VPS33B-205ENST00000556096 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.58■□□□□ 0.24
VPS33B-205ENST00000556096 LRWD1Q9UFC0 647 aa16.58■□□□□ 0.24
VPS33B-205ENST00000556096 MRPL11Q9Y3B7 192 aaKnown RBP16.58■□□□□ 0.24
VPS33B-205ENST00000556096 PASKQ96RG2 1323 aa16.57■□□□□ 0.24
VPS33B-205ENST00000556096 SPDYE3A6NKU9 549 aa16.57■□□□□ 0.24
VPS33B-205ENST00000556096 MSNP26038 577 aaKnown RBP16.57■□□□□ 0.24
VPS33B-205ENST00000556096 SREBF1P36956 1147 aa16.57■□□□□ 0.24
VPS33B-205ENST00000556096 ARHGAP4P98171 946 aa16.57■□□□□ 0.24
VPS33B-205ENST00000556096 CUL4BQ13620 913 aa16.57■□□□□ 0.24
VPS33B-205ENST00000556096 SCYL3Q8IZE3 742 aa16.57■□□□□ 0.24
VPS33B-205ENST00000556096 STAMQ92783 540 aa16.57■□□□□ 0.24
VPS33B-205ENST00000556096 CALML4Q96GE6 196 aa16.57■□□□□ 0.24
VPS33B-205ENST00000556096 P2RX7Q99572 595 aaKnown RBP16.57■□□□□ 0.24
VPS33B-205ENST00000556096 WDR18Q9BV38 432 aa16.57■□□□□ 0.24
VPS33B-205ENST00000556096 HSD3B7Q9H2F3 369 aa16.57■□□□□ 0.24
VPS33B-205ENST00000556096 PHIPQ8WWQ0 1821 aa16.57■□□□□ 0.24
VPS33B-205ENST00000556096 ABCB11O95342 1321 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 CYP3A4P08684 503 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 PLCG1P19174 1290 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 CASP1P29466 404 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 INPP5BP32019 993 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 CIITAP33076 1130 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 USP14P54578 494 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 FSTL1Q12841 308 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 SUPT20HL1Q3ZLR7 823 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 CST9Q5W186 159 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 PRPF38AQ8NAV1 312 aaKnown RBP16.56■□□□□ 0.24
VPS33B-205ENST00000556096 SPC24Q8NBT2 197 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 TTC12Q9H892 705 aaPredicted RBP16.56■□□□□ 0.24
VPS33B-205ENST00000556096 KCNMB3Q9NPA1 279 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 TBX3O15119 743 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 SLC26A4O43511 780 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 RPN1P04843 607 aaKnown RBP16.56■□□□□ 0.24
VPS33B-205ENST00000556096 HTRA3P83110 453 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 TTLL12Q14166 644 aaPredicted RBP16.56■□□□□ 0.24
VPS33B-205ENST00000556096 Q4G0T1 1027 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 CCDC174Q6PII3 467 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 DRC7Q8IY82 874 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 BLZF1Q9H2G9 400 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 AS3MTQ9HBK9 375 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 FBXO28Q9NVF7 368 aa16.56■□□□□ 0.24
VPS33B-205ENST00000556096 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.56■□□□□ 0.24
VPS33B-205ENST00000556096 CLCN1P35523 988 aa16.55■□□□□ 0.24
VPS33B-205ENST00000556096 KCNB1Q14721 858 aa16.55■□□□□ 0.24
VPS33B-205ENST00000556096 SLFN12Q8IYM2 578 aa16.55■□□□□ 0.24
VPS33B-205ENST00000556096 WRNIP1Q96S55 665 aa16.55■□□□□ 0.24
VPS33B-205ENST00000556096 SLF1Q9BQI6 1058 aa16.55■□□□□ 0.24
VPS33B-205ENST00000556096 STK17AQ9UEE5 414 aa16.55■□□□□ 0.24
VPS33B-205ENST00000556096 PCDHA12Q9UN75 941 aa16.55■□□□□ 0.24
VPS33B-205ENST00000556096 GCOM1H8Y6P7 765 aaPredicted RBP16.54■□□□□ 0.24
VPS33B-205ENST00000556096 MARCH6O60337 910 aa16.54■□□□□ 0.24
VPS33B-205ENST00000556096 ICAM1P05362 532 aa16.54■□□□□ 0.24
VPS33B-205ENST00000556096 POLR2MP0CAP2 368 aa16.54■□□□□ 0.24
VPS33B-205ENST00000556096 AMPD3Q01432 767 aa16.54■□□□□ 0.24
VPS33B-205ENST00000556096 GRB10Q13322 594 aa16.54■□□□□ 0.24
VPS33B-205ENST00000556096 ZNF658Q5TYW1 1059 aaPredicted RBP16.54■□□□□ 0.24
VPS33B-205ENST00000556096 KRT79Q5XKE5 535 aa16.54■□□□□ 0.24
VPS33B-205ENST00000556096 LRRC15Q8TF66 581 aa16.54■□□□□ 0.24
VPS33B-205ENST00000556096 C7orf25Q9BPX7 421 aa16.54■□□□□ 0.24
VPS33B-205ENST00000556096 FANCLQ9NW38 375 aa16.54■□□□□ 0.24
VPS33B-205ENST00000556096 TRPM7Q96QT4 1865 aa16.54■□□□□ 0.24
VPS33B-205ENST00000556096 PPP1R3GB7ZBB8 358 aa16.53■□□□□ 0.24
VPS33B-205ENST00000556096 PTPRAP18433 802 aa16.53■□□□□ 0.24
VPS33B-205ENST00000556096 FANCCQ00597 558 aa16.53■□□□□ 0.24
VPS33B-205ENST00000556096 ZKSCAN4Q969J2 545 aaPredicted RBP16.53■□□□□ 0.24
VPS33B-205ENST00000556096 KLRG1Q96E93 195 aa16.53■□□□□ 0.24
VPS33B-205ENST00000556096 PNMA5Q96PV4 448 aa16.53■□□□□ 0.24
VPS33B-205ENST00000556096 PLIN2Q99541 437 aa16.53■□□□□ 0.24
VPS33B-205ENST00000556096 GTPBP4Q9BZE4 634 aaKnown RBP16.53■□□□□ 0.24
VPS33B-205ENST00000556096 PICK1Q9NRD5 415 aa16.53■□□□□ 0.24
VPS33B-205ENST00000556096 EMILIN3Q9NT22 766 aa16.53■□□□□ 0.24
VPS33B-205ENST00000556096 PNMA2Q9UL42 364 aa16.53■□□□□ 0.24
VPS33B-205ENST00000556096 ZNF500O60304 480 aaPredicted RBP16.53■□□□□ 0.24
VPS33B-205ENST00000556096 USP2O75604 605 aaPredicted RBP16.53■□□□□ 0.24
VPS33B-205ENST00000556096 FDX1P10109 184 aa16.53■□□□□ 0.24
VPS33B-205ENST00000556096 CD44P16070 742 aaKnown RBP16.53■□□□□ 0.24
VPS33B-205ENST00000556096 TAL1P17542 331 aaPredicted RBP16.53■□□□□ 0.24
VPS33B-205ENST00000556096 HOXA13P31271 388 aaPredicted RBP16.53■□□□□ 0.24
VPS33B-205ENST00000556096 NOL9Q5SY16 702 aaKnown RBP16.53■□□□□ 0.24
VPS33B-205ENST00000556096 HYIQ5T013 277 aa16.53■□□□□ 0.24
VPS33B-205ENST00000556096 ETNPPLQ8TBG4 499 aa16.53■□□□□ 0.24
VPS33B-205ENST00000556096 FAM20AQ96MK3 541 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms