RNA–Protein interactions for RNA: ENST00000555780.1

PCNX1-210, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 384 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-210ENST00000555780 CCDC82Q8N4S0 544 aa7.86□□□□□ -1.15
PCNX1-210ENST00000555780 FANCBQ8NB91 859 aa7.86□□□□□ -1.15
PCNX1-210ENST00000555780 SYTL5Q8TDW5 730 aaPredicted RBP7.86□□□□□ -1.15
PCNX1-210ENST00000555780 BRF1Q92994 677 aa7.86□□□□□ -1.15
PCNX1-210ENST00000555780 MFRPQ9BY79 579 aa7.86□□□□□ -1.15
PCNX1-210ENST00000555780 CWC22Q9HCG8 908 aaKnown RBP7.86□□□□□ -1.15
PCNX1-210ENST00000555780 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.86□□□□□ -1.15
PCNX1-210ENST00000555780 RBBP6Q7Z6E9 1792 aaKnown RBP7.86□□□□□ -1.15
PCNX1-210ENST00000555780 KLF18A0A0U1RQI7 1052 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 ADAMTS4O75173 837 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 LARGE1O95461 756 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 CASTP20810 708 aaKnown RBP7.85□□□□□ -1.15
PCNX1-210ENST00000555780 CALML3P27482 149 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 PDIA3P30101 505 aaKnown RBP7.85□□□□□ -1.15
PCNX1-210ENST00000555780 ALDH5A1P51649 535 aaPredicted RBP7.85□□□□□ -1.15
PCNX1-210ENST00000555780 HSD17B4P51659 736 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 ST3GAL1Q11201 340 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 PKN1Q16512 942 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 GJC2Q5T442 439 aaPredicted RBP7.85□□□□□ -1.15
PCNX1-210ENST00000555780 MFSD14CQ5VZR4 134 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 CCSAPQ6IQ19 270 aaPredicted RBP7.85□□□□□ -1.15
PCNX1-210ENST00000555780 BLOC1S2Q6QNY1 142 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 RUFY3Q7L099 469 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 CATIPQ7Z7H3 387 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 MICU3Q86XE3 530 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 FBXO11Q86XK2 927 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 TRMT44Q8IYL2 757 aaKnown RBP7.85□□□□□ -1.15
PCNX1-210ENST00000555780 RGS22Q8NE09 1264 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 IL31RAQ8NI17 732 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 DDX11Q96FC9 970 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 PAWRQ96IZ0 340 aaKnown RBP7.85□□□□□ -1.15
PCNX1-210ENST00000555780 SPZ1Q9BXG8 430 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 TM6SF1Q9BZW5 370 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 FBXO40Q9UH90 709 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 DDX20Q9UHI6 824 aaKnown RBP7.85□□□□□ -1.15
PCNX1-210ENST00000555780 CTDP1Q9Y5B0 961 aaPredicted RBP7.85□□□□□ -1.15
PCNX1-210ENST00000555780 GTF3C3Q9Y5Q9 886 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 SLC12A7Q9Y666 1083 aa7.85□□□□□ -1.15
PCNX1-210ENST00000555780 NID2Q14112 1375 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 ABCB11O95342 1321 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 SYNGAP1Q96PV0 1343 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 PNMA6FA0A0J9YX94 578 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 ERICH2A1L162 156 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 CCDC69A6NI79 296 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 MEIS2O14770 477 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 SEPT4O43236 478 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 EDIL3O43854 480 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 ARIH2O95376 493 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 PGK1P00558 417 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 TFRCP02786 760 aaKnown RBP7.84□□□□□ -1.15
PCNX1-210ENST00000555780 SMARCA1P28370 1054 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 ADCYAP1R1P41586 468 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 ACVR2BQ13705 512 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 KRT32Q14532 448 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 SART3Q15020 963 aaKnown RBP7.84□□□□□ -1.15
PCNX1-210ENST00000555780 NFXL1Q6ZNB6 911 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 RNF207Q6ZRF8 634 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 EEPD1Q7L9B9 569 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 TMTC2Q8N394 836 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 AMNQ9BXJ7 453 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 BCAS3Q9H6U6 928 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 NCOA5Q9HCD5 579 aaKnown RBP7.84□□□□□ -1.15
PCNX1-210ENST00000555780 TPCN1Q9ULQ1 816 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 TELO2Q9Y4R8 837 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 STK24Q9Y6E0 443 aa7.84□□□□□ -1.15
PCNX1-210ENST00000555780 LRRC37A2A6NM11 1700 aa7.83□□□□□ -1.16
PCNX1-210ENST00000555780 RBM47A0AV96 593 aaKnown RBP7.83□□□□□ -1.16
PCNX1-210ENST00000555780 PTPDC1A2A3K4 754 aa7.83□□□□□ -1.16
PCNX1-210ENST00000555780 GOLGA8AA7E2F4 631 aa7.83□□□□□ -1.16
PCNX1-210ENST00000555780 GOLGA8BA8MQT2 603 aa7.83□□□□□ -1.16
PCNX1-210ENST00000555780 ZBTB43O43298 467 aa7.83□□□□□ -1.16
PCNX1-210ENST00000555780 DHX16O60231 1041 aaKnown RBP7.83□□□□□ -1.16
PCNX1-210ENST00000555780 CTDNEP1O95476 244 aa7.83□□□□□ -1.16
PCNX1-210ENST00000555780 SMPD1P17405 629 aa7.83□□□□□ -1.16
PCNX1-210ENST00000555780 CNGA1P29973 690 aa7.83□□□□□ -1.16
PCNX1-210ENST00000555780 HOXA13P31271 388 aaPredicted RBP7.83□□□□□ -1.16
PCNX1-210ENST00000555780 CCT2P78371 535 aaKnown RBP7.83□□□□□ -1.16
PCNX1-210ENST00000555780 MLLT1Q03111 559 aaPredicted RBP7.83□□□□□ -1.16
PCNX1-210ENST00000555780 LRRC41Q15345 812 aa7.83□□□□□ -1.16
PCNX1-210ENST00000555780 CCDC144BQ3MJ40 725 aa7.83□□□□□ -1.16
PCNX1-210ENST00000555780 WWC2Q6AWC2 1192 aa7.83□□□□□ -1.16
PCNX1-210ENST00000555780 USP17L6PQ6QN14 398 aa7.83□□□□□ -1.16
PCNX1-210ENST00000555780 FBXO16Q8IX29 292 aaPredicted RBP7.83□□□□□ -1.16
PCNX1-210ENST00000555780 MSL3Q8N5Y2 521 aaKnown RBP7.83□□□□□ -1.16
PCNX1-210ENST00000555780 KLHDC9Q8NEP7 349 aa7.83□□□□□ -1.16
PCNX1-210ENST00000555780 CTCFLQ8NI51 663 aaPredicted RBP7.83□□□□□ -1.16
PCNX1-210ENST00000555780 PTCD2Q8WV60 388 aaKnown RBP7.83□□□□□ -1.16
PCNX1-210ENST00000555780 COPS5Q92905 334 aa7.83□□□□□ -1.16
PCNX1-210ENST00000555780 GPKOWQ92917 476 aaPredicted RBP eCLIP7.83□□□□□ -1.16
PCNX1-210ENST00000555780 NRBP1Q9UHY1 535 aa7.83□□□□□ -1.16
PCNX1-210ENST00000555780 GNEQ9Y223 722 aaKnown RBP7.83□□□□□ -1.16
PCNX1-210ENST00000555780 PCDHA1Q9Y5I3 950 aa7.83□□□□□ -1.16
PCNX1-210ENST00000555780 V9GY48 417 aaPredicted RBP7.83□□□□□ -1.16
PCNX1-210ENST00000555780 ZNFX1Q9P2E3 1918 aaKnown RBP7.83□□□□□ -1.16
PCNX1-210ENST00000555780 SYNRGQ9UMZ2 1314 aa7.82□□□□□ -1.16
PCNX1-210ENST00000555780 KIAA0100Q14667 2235 aaKnown RBP7.82□□□□□ -1.16
PCNX1-210ENST00000555780 FARP2O94887 1054 aaPredicted RBP7.82□□□□□ -1.16
PCNX1-210ENST00000555780 CFBP00751 764 aa7.82□□□□□ -1.16
PCNX1-210ENST00000555780 HMGB1P09429 215 aaKnown RBP7.82□□□□□ -1.16
PCNX1-210ENST00000555780 AK2P54819 239 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms