RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 XAB2Q9HCS7 855 aaKnown RBP19.06■□□□□ 0.64
SYNE3-204ENST00000555759 FKBP3Q00688 224 aaKnown RBP19.06■□□□□ 0.64
SYNE3-204ENST00000555759 LRGUKQ96M69 825 aa19.06■□□□□ 0.64
SYNE3-204ENST00000555759 ANAPC5Q9UJX4 755 aa19.06■□□□□ 0.64
SYNE3-204ENST00000555759 HIBADHP31937 336 aaKnown RBP19.05■□□□□ 0.64
SYNE3-204ENST00000555759 SMYD4Q8IYR2 804 aaPredicted RBP19.05■□□□□ 0.64
SYNE3-204ENST00000555759 OLFM3Q96PB7 478 aa19.05■□□□□ 0.64
SYNE3-204ENST00000555759 TMEM60Q9H2L4 133 aa19.05■□□□□ 0.64
SYNE3-204ENST00000555759 COL4A3BPQ9Y5P4 624 aa19.05■□□□□ 0.64
SYNE3-204ENST00000555759 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
SYNE3-204ENST00000555759 BACH1O14867 736 aa19.05■□□□□ 0.64
SYNE3-204ENST00000555759 SLFN12Q8IYM2 578 aa19.05■□□□□ 0.64
SYNE3-204ENST00000555759 PACSIN2Q9UNF0 486 aaPredicted RBP19.05■□□□□ 0.64
SYNE3-204ENST00000555759 PTPN22Q9Y2R2 807 aa19.05■□□□□ 0.64
SYNE3-204ENST00000555759 TMED2Q15363 201 aa19.05■□□□□ 0.64
SYNE3-204ENST00000555759 ZC3H18Q86VM9 953 aaKnown RBP19.05■□□□□ 0.64
SYNE3-204ENST00000555759 TRIM11Q96F44 468 aa19.05■□□□□ 0.64
SYNE3-204ENST00000555759 SH2D4AQ9H788 454 aa19.05■□□□□ 0.64
SYNE3-204ENST00000555759 PODXLO00592 558 aa19.05■□□□□ 0.64
SYNE3-204ENST00000555759 TRIM66O15016 1216 aa19.05■□□□□ 0.64
SYNE3-204ENST00000555759 TTC4O95801 387 aa19.05■□□□□ 0.64
SYNE3-204ENST00000555759 TFAP4Q01664 338 aa19.05■□□□□ 0.64
SYNE3-204ENST00000555759 CHRNA2Q15822 529 aa19.05■□□□□ 0.64
SYNE3-204ENST00000555759 SDCCAG3Q96C92 435 aa19.05■□□□□ 0.64
SYNE3-204ENST00000555759 CCDC68Q9H2F9 335 aa19.05■□□□□ 0.64
SYNE3-204ENST00000555759 GARSP41250 739 aaKnown RBP19.04■□□□□ 0.64
SYNE3-204ENST00000555759 RPS6KA2Q15349 733 aa19.04■□□□□ 0.64
SYNE3-204ENST00000555759 FMR1NBQ8N0W7 255 aaPredicted RBP19.04■□□□□ 0.64
SYNE3-204ENST00000555759 PCDHA12Q9UN75 941 aa19.04■□□□□ 0.64
SYNE3-204ENST00000555759 DAPK3O43293 454 aa19.04■□□□□ 0.64
SYNE3-204ENST00000555759 PAGE5Q96GU1 130 aa19.04■□□□□ 0.64
SYNE3-204ENST00000555759 PITPNM3Q9BZ71 974 aa19.04■□□□□ 0.64
SYNE3-204ENST00000555759 PCDH11XQ9BZA7 1347 aa19.04■□□□□ 0.64
SYNE3-204ENST00000555759 PCDH11YQ9BZA8 1340 aa19.04■□□□□ 0.64
SYNE3-204ENST00000555759 GRID2IPA4D2P6 1211 aa19.04■□□□□ 0.64
SYNE3-204ENST00000555759 KRT3P12035 628 aa19.04■□□□□ 0.64
SYNE3-204ENST00000555759 ASPHQ12797 758 aa19.04■□□□□ 0.64
SYNE3-204ENST00000555759 NXNQ6DKJ4 435 aa19.04■□□□□ 0.64
SYNE3-204ENST00000555759 CDKL2Q92772 493 aa19.04■□□□□ 0.64
SYNE3-204ENST00000555759 ZBTB22O15209 634 aa19.04■□□□□ 0.64
SYNE3-204ENST00000555759 PDE6AP16499 860 aa19.04■□□□□ 0.64
SYNE3-204ENST00000555759 SGO2Q562F6 1265 aa19.04■□□□□ 0.64
SYNE3-204ENST00000555759 DHX40Q8IX18 779 aaKnown RBP19.04■□□□□ 0.64
SYNE3-204ENST00000555759 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.04■□□□□ 0.64
SYNE3-204ENST00000555759 TPTE2Q6XPS3 522 aa19.04■□□□□ 0.64
SYNE3-204ENST00000555759 CAPN12Q6ZSI9 719 aa19.04■□□□□ 0.64
SYNE3-204ENST00000555759 ZNF589Q86UQ0 364 aaPredicted RBP19.04■□□□□ 0.64
SYNE3-204ENST00000555759 LGR6Q9HBX8 967 aa19.04■□□□□ 0.64
SYNE3-204ENST00000555759 AFPP02771 609 aaKnown RBP19.03■□□□□ 0.64
SYNE3-204ENST00000555759 RFC4P35249 363 aa19.03■□□□□ 0.64
SYNE3-204ENST00000555759 CYP27A1Q02318 531 aa19.03■□□□□ 0.64
SYNE3-204ENST00000555759 GEMIN8Q9NWZ8 242 aaKnown RBP19.03■□□□□ 0.64
SYNE3-204ENST00000555759 PPP1R1BQ9UD71 204 aaPredicted RBP19.03■□□□□ 0.64
SYNE3-204ENST00000555759 STK17AQ9UEE5 414 aa19.03■□□□□ 0.64
SYNE3-204ENST00000555759 SLCO1A2P46721 670 aa19.03■□□□□ 0.64
SYNE3-204ENST00000555759 CYP2J2P51589 502 aa19.03■□□□□ 0.64
SYNE3-204ENST00000555759 CMTR1Q8N1G2 835 aaKnown RBP19.03■□□□□ 0.64
SYNE3-204ENST00000555759 TTC16Q8NEE8 873 aa19.03■□□□□ 0.64
SYNE3-204ENST00000555759 SLC52A2Q9HAB3 445 aa19.03■□□□□ 0.64
SYNE3-204ENST00000555759 BIN2Q9UBW5 565 aaPredicted RBP19.03■□□□□ 0.64
SYNE3-204ENST00000555759 SPAG7O75391 227 aa19.03■□□□□ 0.64
SYNE3-204ENST00000555759 ATF7P17544 494 aaPredicted RBP19.03■□□□□ 0.64
SYNE3-204ENST00000555759 MESDQ14696 234 aa19.03■□□□□ 0.64
SYNE3-204ENST00000555759 BEND6Q5SZJ8 279 aaPredicted RBP19.03■□□□□ 0.64
SYNE3-204ENST00000555759 RBM26Q5T8P6 1007 aaKnown RBP19.03■□□□□ 0.64
SYNE3-204ENST00000555759 ZNF449Q6P9G9 518 aa19.03■□□□□ 0.64
SYNE3-204ENST00000555759 CXorf38Q8TB03 319 aa19.03■□□□□ 0.64
SYNE3-204ENST00000555759 IFT122Q9HBG6 1241 aa19.03■□□□□ 0.64
SYNE3-204ENST00000555759 AATFQ9NY61 560 aaKnown RBP eCLIP19.03■□□□□ 0.64
SYNE3-204ENST00000555759 SAP30BPQ9UHR5 308 aaKnown RBP19.03■□□□□ 0.64
SYNE3-204ENST00000555759 ZBTB12Q9Y330 459 aaPredicted RBP19.03■□□□□ 0.64
SYNE3-204ENST00000555759 F8W031 263 aaPredicted RBP19.03■□□□□ 0.64
SYNE3-204ENST00000555759 IFNAR1P17181 557 aa19.03■□□□□ 0.64
SYNE3-204ENST00000555759 MX2P20592 715 aa19.03■□□□□ 0.64
SYNE3-204ENST00000555759 MSH2P43246 934 aa19.03■□□□□ 0.64
SYNE3-204ENST00000555759 NR1H3Q13133 447 aa19.03■□□□□ 0.64
SYNE3-204ENST00000555759 GRAMD1CQ8IYS0 662 aa19.03■□□□□ 0.64
SYNE3-204ENST00000555759 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.03■□□□□ 0.64
SYNE3-204ENST00000555759 LARP4BQ92615 738 aaKnown RBP19.03■□□□□ 0.64
SYNE3-204ENST00000555759 CHMP6Q96FZ7 201 aa19.03■□□□□ 0.64
SYNE3-204ENST00000555759 SOS2Q07890 1332 aaPredicted RBP19.03■□□□□ 0.64
SYNE3-204ENST00000555759 CORO7P57737 925 aa19.02■□□□□ 0.64
SYNE3-204ENST00000555759 SERPINI1Q99574 410 aa19.02■□□□□ 0.64
SYNE3-204ENST00000555759 PDCD2Q16342 344 aaPredicted RBP19.02■□□□□ 0.64
SYNE3-204ENST00000555759 KRT80Q6KB66 452 aa19.02■□□□□ 0.64
SYNE3-204ENST00000555759 ARMCX5Q6P1M9 558 aa19.02■□□□□ 0.64
SYNE3-204ENST00000555759 ZNF579Q8NAF0 562 aaKnown RBP19.02■□□□□ 0.64
SYNE3-204ENST00000555759 PDZD8Q8NEN9 1154 aa19.02■□□□□ 0.64
SYNE3-204ENST00000555759 OSBPL9Q96SU4 736 aa19.02■□□□□ 0.64
SYNE3-204ENST00000555759 MYO1FO00160 1098 aa19.02■□□□□ 0.64
SYNE3-204ENST00000555759 AOC3Q16853 763 aa19.02■□□□□ 0.64
SYNE3-204ENST00000555759 TEKT1Q969V4 418 aa19.02■□□□□ 0.64
SYNE3-204ENST00000555759 EPN3Q9H201 632 aa19.02■□□□□ 0.64
SYNE3-204ENST00000555759 IL2RBP14784 551 aa19.02■□□□□ 0.63
SYNE3-204ENST00000555759 PPP1R2P3Q6NXS1 205 aa19.02■□□□□ 0.63
SYNE3-204ENST00000555759 MORC4Q8TE76 937 aa19.02■□□□□ 0.63
SYNE3-204ENST00000555759 EIF2AQ9BY44 585 aaKnown RBP19.02■□□□□ 0.63
SYNE3-204ENST00000555759 KIAA0556O60303 1618 aa19.02■□□□□ 0.63
SYNE3-204ENST00000555759 EIF3HO15372 352 aaKnown RBP eCLIP19.01■□□□□ 0.63
SYNE3-204ENST00000555759 BPIFB4P59827 614 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms