RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 TMEM67Q5HYA8 995 aa17.93■□□□□ 0.46
SNX6-205ENST00000555648 HOMER1Q86YM7 354 aa17.93■□□□□ 0.46
SNX6-205ENST00000555648 TBC1D5Q92609 795 aa17.93■□□□□ 0.46
SNX6-205ENST00000555648 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.93■□□□□ 0.46
SNX6-205ENST00000555648 TRPV6Q9H1D0 765 aa17.93■□□□□ 0.46
SNX6-205ENST00000555648 PCDHA1Q9Y5I3 950 aa17.93■□□□□ 0.46
SNX6-205ENST00000555648 MCM3APO60318 1980 aa17.92■□□□□ 0.46
SNX6-205ENST00000555648 PALM3A6NDB9 673 aaPredicted RBP17.92■□□□□ 0.46
SNX6-205ENST00000555648 ZBTB5O15062 677 aa17.92■□□□□ 0.46
SNX6-205ENST00000555648 B4GALT4O60513 344 aa17.92■□□□□ 0.46
SNX6-205ENST00000555648 ACRP10323 421 aa17.92■□□□□ 0.46
SNX6-205ENST00000555648 EIF2AK2P19525 551 aaKnown RBP17.92■□□□□ 0.46
SNX6-205ENST00000555648 CHMP4BP1P59074 171 aa17.92■□□□□ 0.46
SNX6-205ENST00000555648 CASC1Q6TDU7 716 aa17.92■□□□□ 0.46
SNX6-205ENST00000555648 ALDH8A1Q9H2A2 487 aaPredicted RBP17.92■□□□□ 0.46
SNX6-205ENST00000555648 SEMA6BQ9H3T3 888 aa17.92■□□□□ 0.46
SNX6-205ENST00000555648 MAD2L2Q9UI95 211 aa17.92■□□□□ 0.46
SNX6-205ENST00000555648 RBM8AQ9Y5S9 174 aaKnown RBP17.92■□□□□ 0.46
SNX6-205ENST00000555648 LTBP2Q14767 1821 aa17.92■□□□□ 0.46
SNX6-205ENST00000555648 GH1P01241 217 aa17.91■□□□□ 0.46
SNX6-205ENST00000555648 CCL23P55773 120 aa17.91■□□□□ 0.46
SNX6-205ENST00000555648 GRM4Q14833 912 aa17.91■□□□□ 0.46
SNX6-205ENST00000555648 TMEM240Q5SV17 173 aa17.91■□□□□ 0.46
SNX6-205ENST00000555648 ZNF365Q70YC5 407 aa17.91■□□□□ 0.46
SNX6-205ENST00000555648 CHST3Q7LGC8 479 aa17.91■□□□□ 0.46
SNX6-205ENST00000555648 RPUSD2Q8IZ73 545 aaKnown RBP17.91■□□□□ 0.46
SNX6-205ENST00000555648 COPS5Q92905 334 aa17.91■□□□□ 0.46
SNX6-205ENST00000555648 MAP4K1Q92918 833 aa17.91■□□□□ 0.46
SNX6-205ENST00000555648 GUCD1Q96NT3 240 aa17.91■□□□□ 0.46
SNX6-205ENST00000555648 IL23AQ9NPF7 189 aa17.91■□□□□ 0.46
SNX6-205ENST00000555648 NOD1Q9Y239 953 aa17.91■□□□□ 0.46
SNX6-205ENST00000555648 GRIN2DO15399 1336 aa17.91■□□□□ 0.46
SNX6-205ENST00000555648 TMEM265A0A087WTH1 108 aa17.9■□□□□ 0.46
SNX6-205ENST00000555648 A6NJR5 290 aa17.9■□□□□ 0.46
SNX6-205ENST00000555648 EIF3JO75822 258 aaKnown RBP17.9■□□□□ 0.46
SNX6-205ENST00000555648 FGBP02675 491 aa17.9■□□□□ 0.46
SNX6-205ENST00000555648 SAMD3Q8N6K7 520 aa17.9■□□□□ 0.46
SNX6-205ENST00000555648 CDX2Q99626 313 aaPredicted RBP17.9■□□□□ 0.46
SNX6-205ENST00000555648 NOC4LQ9BVI4 516 aaKnown RBP17.9■□□□□ 0.46
SNX6-205ENST00000555648 MAP3K20Q9NYL2 800 aaKnown RBP17.9■□□□□ 0.46
SNX6-205ENST00000555648 COL20A1Q9P218 1284 aa17.9■□□□□ 0.46
SNX6-205ENST00000555648 MRVI1Q9Y6F6 885 aa17.9■□□□□ 0.46
SNX6-205ENST00000555648 LAMA4Q16363 1823 aa17.89■□□□□ 0.45
SNX6-205ENST00000555648 GCOM1H8Y6P7 765 aaPredicted RBP17.89■□□□□ 0.45
SNX6-205ENST00000555648 NR3C2P08235 984 aa17.89■□□□□ 0.45
SNX6-205ENST00000555648 POLR2MP0CAP2 368 aa17.89■□□□□ 0.45
SNX6-205ENST00000555648 MYCLP12524 364 aaPredicted RBP17.89■□□□□ 0.45
SNX6-205ENST00000555648 KIF5BP33176 963 aa17.89■□□□□ 0.45
SNX6-205ENST00000555648 LY6KQ17RY6 165 aa17.89■□□□□ 0.45
SNX6-205ENST00000555648 NBPF20Q3BBV1 942 aa17.89■□□□□ 0.45
SNX6-205ENST00000555648 NFXL1Q6ZNB6 911 aa17.89■□□□□ 0.45
SNX6-205ENST00000555648 RETREG2Q8NC44 543 aa17.89■□□□□ 0.45
SNX6-205ENST00000555648 CTCFLQ8NI51 663 aaPredicted RBP17.89■□□□□ 0.45
SNX6-205ENST00000555648 MTMR8Q96EF0 704 aa17.89■□□□□ 0.45
SNX6-205ENST00000555648 PIGSQ96S52 555 aa17.89■□□□□ 0.45
SNX6-205ENST00000555648 PXMP2Q9NR77 195 aa17.89■□□□□ 0.45
SNX6-205ENST00000555648 TRMT13Q9NUP7 481 aaKnown RBP17.89■□□□□ 0.45
SNX6-205ENST00000555648 PNMA6FA0A0J9YX94 578 aa17.88■□□□□ 0.45
SNX6-205ENST00000555648 ARIH2O95376 493 aa17.88■□□□□ 0.45
SNX6-205ENST00000555648 CASTP20810 708 aaKnown RBP17.88■□□□□ 0.45
SNX6-205ENST00000555648 DNAJB2P25686 324 aa17.88■□□□□ 0.45
SNX6-205ENST00000555648 HSD17B4P51659 736 aa17.88■□□□□ 0.45
SNX6-205ENST00000555648 NFRKBQ6P4R8 1299 aa17.88■□□□□ 0.45
SNX6-205ENST00000555648 AFG1LQ8WV93 481 aa17.88■□□□□ 0.45
SNX6-205ENST00000555648 TIFAQ96CG3 184 aa17.88■□□□□ 0.45
SNX6-205ENST00000555648 RIOX1Q9H6W3 641 aa17.88■□□□□ 0.45
SNX6-205ENST00000555648 CCDC69A6NI79 296 aa17.87■□□□□ 0.45
SNX6-205ENST00000555648 CYP2C9P11712 490 aa17.87■□□□□ 0.45
SNX6-205ENST00000555648 HOXA13P31271 388 aaPredicted RBP17.87■□□□□ 0.45
SNX6-205ENST00000555648 MCM5P33992 734 aa17.87■□□□□ 0.45
SNX6-205ENST00000555648 PTPN11Q06124 597 aaPredicted RBP17.87■□□□□ 0.45
SNX6-205ENST00000555648 TROAPQ12815 778 aa17.87■□□□□ 0.45
SNX6-205ENST00000555648 DGKDQ16760 1214 aa17.87■□□□□ 0.45
SNX6-205ENST00000555648 CCDC62Q6P9F0 684 aa17.87■□□□□ 0.45
SNX6-205ENST00000555648 STOX1Q6ZVD7 989 aa17.87■□□□□ 0.45
SNX6-205ENST00000555648 C16orf59Q7L2K0 433 aa17.87■□□□□ 0.45
SNX6-205ENST00000555648 FCHSD1Q86WN1 690 aa17.87■□□□□ 0.45
SNX6-205ENST00000555648 TMTC2Q8N394 836 aa17.87■□□□□ 0.45
SNX6-205ENST00000555648 PIBF1Q8WXW3 757 aa17.87■□□□□ 0.45
SNX6-205ENST00000555648 HERVK_113Q902F9 699 aa17.87■□□□□ 0.45
SNX6-205ENST00000555648 SENP2Q9HC62 589 aa17.87■□□□□ 0.45
SNX6-205ENST00000555648 ANO2Q9NQ90 1003 aa17.87■□□□□ 0.45
SNX6-205ENST00000555648 MSRAQ9UJ68 235 aa17.87■□□□□ 0.45
SNX6-205ENST00000555648 TAF6LQ9Y6J9 622 aa17.87■□□□□ 0.45
SNX6-205ENST00000555648 UMODL1Q5DID0 1318 aa17.87■□□□□ 0.45
SNX6-205ENST00000555648 ZBBXA8MT70 800 aa17.86■□□□□ 0.45
SNX6-205ENST00000555648 PRC1O43663 620 aa17.86■□□□□ 0.45
SNX6-205ENST00000555648 PPP1R11O60927 126 aaPredicted RBP17.86■□□□□ 0.45
SNX6-205ENST00000555648 DDAH1O94760 285 aa17.86■□□□□ 0.45
SNX6-205ENST00000555648 MMP3P08254 477 aa17.86■□□□□ 0.45
SNX6-205ENST00000555648 FOSL2P15408 326 aa17.86■□□□□ 0.45
SNX6-205ENST00000555648 CCND2P30279 289 aa17.86■□□□□ 0.45
SNX6-205ENST00000555648 GNAQP50148 359 aa17.86■□□□□ 0.45
SNX6-205ENST00000555648 LAMC2Q13753 1193 aa17.86■□□□□ 0.45
SNX6-205ENST00000555648 KCNV1Q6PIU1 500 aa17.86■□□□□ 0.45
SNX6-205ENST00000555648 CENPQQ7L2Z9 268 aaPredicted RBP17.86■□□□□ 0.45
SNX6-205ENST00000555648 OTOP2Q7RTS6 562 aa17.86■□□□□ 0.45
SNX6-205ENST00000555648 DHX37Q8IY37 1157 aaKnown RBP17.86■□□□□ 0.45
SNX6-205ENST00000555648 MB21D2Q8IYB1 491 aaPredicted RBP17.86■□□□□ 0.45
SNX6-205ENST00000555648 IGDCC4Q8TDY8 1250 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms