RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 MYO15AQ9UKN7 3530 aa10.95□□□□□ -0.66
PRKCH-218ENST00000555628 USP17L12C9JPN9 530 aa10.94□□□□□ -0.66
PRKCH-218ENST00000555628 USP17L21D6R901 530 aa10.94□□□□□ -0.66
PRKCH-218ENST00000555628 TRIM66O15016 1216 aa10.94□□□□□ -0.66
PRKCH-218ENST00000555628 MBD4O95243 580 aa10.94□□□□□ -0.66
PRKCH-218ENST00000555628 PFKMP08237 780 aa10.94□□□□□ -0.66
PRKCH-218ENST00000555628 SMPD1P17405 629 aa10.94□□□□□ -0.66
PRKCH-218ENST00000555628 ADD2P35612 726 aa10.94□□□□□ -0.66
PRKCH-218ENST00000555628 CNTN2Q02246 1040 aa10.94□□□□□ -0.66
PRKCH-218ENST00000555628 GRB10Q13322 594 aa10.94□□□□□ -0.66
PRKCH-218ENST00000555628 FSCN1Q16658 493 aaKnown RBP10.94□□□□□ -0.66
PRKCH-218ENST00000555628 TLK2Q86UE8 772 aa10.94□□□□□ -0.66
PRKCH-218ENST00000555628 AACSQ86V21 672 aa10.94□□□□□ -0.66
PRKCH-218ENST00000555628 ALYREFQ86V81 257 aaKnown RBP10.94□□□□□ -0.66
PRKCH-218ENST00000555628 DDX11Q96FC9 970 aa10.94□□□□□ -0.66
PRKCH-218ENST00000555628 SEZ6LQ9BYH1 1024 aa10.94□□□□□ -0.66
PRKCH-218ENST00000555628 ALDH8A1Q9H2A2 487 aaPredicted RBP10.94□□□□□ -0.66
PRKCH-218ENST00000555628 SPC25Q9HBM1 224 aa10.94□□□□□ -0.66
PRKCH-218ENST00000555628 SLC24A3Q9HC58 644 aa10.94□□□□□ -0.66
PRKCH-218ENST00000555628 DDX49Q9Y6V7 483 aaKnown RBP10.94□□□□□ -0.66
PRKCH-218ENST00000555628 ZNF536O15090 1300 aa10.93□□□□□ -0.66
PRKCH-218ENST00000555628 F5H6K3 240 aa10.93□□□□□ -0.66
PRKCH-218ENST00000555628 IPO8O15397 1037 aaKnown RBP10.93□□□□□ -0.66
PRKCH-218ENST00000555628 RASA1P20936 1047 aa10.93□□□□□ -0.66
PRKCH-218ENST00000555628 CLCN1P35523 988 aa10.93□□□□□ -0.66
PRKCH-218ENST00000555628 OAZ1P54368 228 aa10.93□□□□□ -0.66
PRKCH-218ENST00000555628 PSMC6P62333 389 aa10.93□□□□□ -0.66
PRKCH-218ENST00000555628 KLRC3Q07444 240 aa10.93□□□□□ -0.66
PRKCH-218ENST00000555628 TTF1Q15361 905 aaPredicted RBP10.93□□□□□ -0.66
PRKCH-218ENST00000555628 TMEM67Q5HYA8 995 aa10.93□□□□□ -0.66
PRKCH-218ENST00000555628 TAPT1Q6NXT6 567 aa10.93□□□□□ -0.66
PRKCH-218ENST00000555628 CEP85Q6P2H3 762 aa10.93□□□□□ -0.66
PRKCH-218ENST00000555628 CTR9Q6PD62 1173 aa10.93□□□□□ -0.66
PRKCH-218ENST00000555628 PRPF38AQ8NAV1 312 aaKnown RBP10.93□□□□□ -0.66
PRKCH-218ENST00000555628 CHST13Q8NET6 341 aa10.93□□□□□ -0.66
PRKCH-218ENST00000555628 HLA-CQ95604 372 aa10.93□□□□□ -0.66
PRKCH-218ENST00000555628 VTI1AQ96AJ9 217 aa10.93□□□□□ -0.66
PRKCH-218ENST00000555628 RAVER2Q9HCJ3 691 aaKnown RBP10.93□□□□□ -0.66
PRKCH-218ENST00000555628 PRR33A8MZF0 331 aa10.92□□□□□ -0.66
PRKCH-218ENST00000555628 GOLIM4O00461 696 aa10.92□□□□□ -0.66
PRKCH-218ENST00000555628 RLBP1P12271 317 aa10.92□□□□□ -0.66
PRKCH-218ENST00000555628 TNFAIP2Q03169 654 aa10.92□□□□□ -0.66
PRKCH-218ENST00000555628 SKIV2LQ15477 1246 aaKnown RBP10.92□□□□□ -0.66
PRKCH-218ENST00000555628 RPUSD2Q8IZ73 545 aaKnown RBP10.92□□□□□ -0.66
PRKCH-218ENST00000555628 MORC4Q8TE76 937 aa10.92□□□□□ -0.66
PRKCH-218ENST00000555628 SLC9A7Q96T83 725 aa10.92□□□□□ -0.66
PRKCH-218ENST00000555628 CERS4Q9HA82 394 aa10.92□□□□□ -0.66
PRKCH-218ENST00000555628 A1CFQ9NQ94 594 aaKnown RBP10.92□□□□□ -0.66
PRKCH-218ENST00000555628 TRMT13Q9NUP7 481 aaKnown RBP10.92□□□□□ -0.66
PRKCH-218ENST00000555628 NYAP2Q9P242 653 aa10.92□□□□□ -0.66
PRKCH-218ENST00000555628 FBXO40Q9UH90 709 aa10.92□□□□□ -0.66
PRKCH-218ENST00000555628 Q9Y3F1 56 aa10.92□□□□□ -0.66
PRKCH-218ENST00000555628 SIP14410 1827 aa10.92□□□□□ -0.66
PRKCH-218ENST00000555628 DMDP11532 3685 aa10.92□□□□□ -0.66
PRKCH-218ENST00000555628 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.91□□□□□ -0.66
PRKCH-218ENST00000555628 ZBBXA8MT70 800 aa10.91□□□□□ -0.66
PRKCH-218ENST00000555628 NR1I2O75469 434 aa10.91□□□□□ -0.66
PRKCH-218ENST00000555628 CYP2C9P11712 490 aa10.91□□□□□ -0.66
PRKCH-218ENST00000555628 SSTR3P32745 418 aaPredicted RBP10.91□□□□□ -0.66
PRKCH-218ENST00000555628 MRE11P49959 708 aa10.91□□□□□ -0.66
PRKCH-218ENST00000555628 GPNMBQ14956 572 aa10.91□□□□□ -0.66
PRKCH-218ENST00000555628 HERC6Q8IVU3 1022 aa10.91□□□□□ -0.66
PRKCH-218ENST00000555628 CPXCR1Q8N123 301 aa10.91□□□□□ -0.66
PRKCH-218ENST00000555628 ANKRD35Q8N283 1001 aa10.91□□□□□ -0.66
PRKCH-218ENST00000555628 PHOSPHO2Q8TCD6 241 aa10.91□□□□□ -0.66
PRKCH-218ENST00000555628 ARNTL2Q8WYA1 636 aa10.91□□□□□ -0.66
PRKCH-218ENST00000555628 MKL1Q969V6 931 aa10.91□□□□□ -0.66
PRKCH-218ENST00000555628 CTAGE1Q96RT6 745 aa10.91□□□□□ -0.66
PRKCH-218ENST00000555628 PDGFCQ9NRA1 345 aa10.91□□□□□ -0.66
PRKCH-218ENST00000555628 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.91□□□□□ -0.66
PRKCH-218ENST00000555628 SYNPO2Q9UMS6 1093 aa10.91□□□□□ -0.66
PRKCH-218ENST00000555628 EXOC6BQ9Y2D4 811 aa10.91□□□□□ -0.66
PRKCH-218ENST00000555628 SLC27A5Q9Y2P5 690 aa10.91□□□□□ -0.66
PRKCH-218ENST00000555628 PLIN4Q96Q06 1357 aa10.9□□□□□ -0.66
PRKCH-218ENST00000555628 DCHS1Q96JQ0 3298 aa10.9□□□□□ -0.66
PRKCH-218ENST00000555628 TNKSO95271 1327 aa10.9□□□□□ -0.66
PRKCH-218ENST00000555628 LCHNA4D1U4 455 aa10.9□□□□□ -0.66
PRKCH-218ENST00000555628 PURAQ00577 322 aaKnown RBP10.9□□□□□ -0.66
PRKCH-218ENST00000555628 NHLH1Q02575 133 aa10.9□□□□□ -0.66
PRKCH-218ENST00000555628 AMHR2Q16671 573 aa10.9□□□□□ -0.66
PRKCH-218ENST00000555628 FAM178BQ8IXR5 827 aa10.9□□□□□ -0.66
PRKCH-218ENST00000555628 RHPN1Q8TCX5 695 aa10.9□□□□□ -0.66
PRKCH-218ENST00000555628 SNX27Q96L92 541 aa10.9□□□□□ -0.66
PRKCH-218ENST00000555628 IL1RAPL2Q9NP60 686 aa10.9□□□□□ -0.66
PRKCH-218ENST00000555628 LMCD1Q9NZU5 365 aa10.9□□□□□ -0.66
PRKCH-218ENST00000555628 ZBED4O75132 1171 aa10.89□□□□□ -0.67
PRKCH-218ENST00000555628 RFC2P35250 354 aa10.89□□□□□ -0.67
PRKCH-218ENST00000555628 UBE3CQ15386 1083 aa10.89□□□□□ -0.67
PRKCH-218ENST00000555628 SBK1Q52WX2 424 aa10.89□□□□□ -0.67
PRKCH-218ENST00000555628 ERC1Q8IUD2 1116 aa10.89□□□□□ -0.67
PRKCH-218ENST00000555628 FBXO16Q8IX29 292 aaPredicted RBP10.89□□□□□ -0.67
PRKCH-218ENST00000555628 GMCL1P1Q8NEA9 526 aa10.89□□□□□ -0.67
PRKCH-218ENST00000555628 FRAT1Q92837 279 aaPredicted RBP10.89□□□□□ -0.67
PRKCH-218ENST00000555628 KIFC2Q96AC6 838 aa10.89□□□□□ -0.67
PRKCH-218ENST00000555628 ACAD9Q9H845 621 aa10.89□□□□□ -0.67
PRKCH-218ENST00000555628 FEM1BQ9UK73 627 aa10.89□□□□□ -0.67
PRKCH-218ENST00000555628 CACNA1HO95180 2353 aa10.89□□□□□ -0.67
PRKCH-218ENST00000555628 ATG2AQ2TAZ0 1938 aa10.88□□□□□ -0.67
PRKCH-218ENST00000555628 RBM47A0AV96 593 aaKnown RBP10.88□□□□□ -0.67
PRKCH-218ENST00000555628 ASB14A6NK59 587 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms