RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 LRIT3Q3SXY7 679 aa17.25■□□□□ 0.35
EFCAB11-207ENST00000555608 NFXL1Q6ZNB6 911 aa17.25■□□□□ 0.35
EFCAB11-207ENST00000555608 RMDN3Q96TC7 470 aa17.25■□□□□ 0.35
EFCAB11-207ENST00000555608 Q9Y3F1 56 aa17.25■□□□□ 0.35
EFCAB11-207ENST00000555608 PCDHA1Q9Y5I3 950 aa17.25■□□□□ 0.35
EFCAB11-207ENST00000555608 MROH7Q68CQ1 1323 aa17.24■□□□□ 0.35
EFCAB11-207ENST00000555608 ZEB2O60315 1214 aa17.24■□□□□ 0.35
EFCAB11-207ENST00000555608 DDAH1O94760 285 aa17.24■□□□□ 0.35
EFCAB11-207ENST00000555608 MYL3P08590 195 aa17.24■□□□□ 0.35
EFCAB11-207ENST00000555608 HOXA13P31271 388 aaPredicted RBP17.24■□□□□ 0.35
EFCAB11-207ENST00000555608 HSD17B4P51659 736 aa17.24■□□□□ 0.35
EFCAB11-207ENST00000555608 SHHQ15465 462 aa17.24■□□□□ 0.35
EFCAB11-207ENST00000555608 ARHGEF16Q5VV41 709 aa17.24■□□□□ 0.35
EFCAB11-207ENST00000555608 SEPT14Q6ZU15 432 aa17.24■□□□□ 0.35
EFCAB11-207ENST00000555608 Q7L0L9 218 aa17.24■□□□□ 0.35
EFCAB11-207ENST00000555608 FAM126BQ8IXS8 530 aa17.24■□□□□ 0.35
EFCAB11-207ENST00000555608 NSUN6Q8TEA1 469 aaKnown RBP17.24■□□□□ 0.35
EFCAB11-207ENST00000555608 SCFD2Q8WU76 684 aa17.24■□□□□ 0.35
EFCAB11-207ENST00000555608 TOX2Q96NM4 488 aa17.24■□□□□ 0.35
EFCAB11-207ENST00000555608 PPP1R12CQ9BZL4 782 aa17.24■□□□□ 0.35
EFCAB11-207ENST00000555608 TBX21Q9UL17 535 aa17.24■□□□□ 0.35
EFCAB11-207ENST00000555608 COL6A3P12111 3177 aa17.24■□□□□ 0.35
EFCAB11-207ENST00000555608 GRIN2DO15399 1336 aa17.23■□□□□ 0.35
EFCAB11-207ENST00000555608 CCDC69A6NI79 296 aa17.23■□□□□ 0.35
EFCAB11-207ENST00000555608 PLEKHA8P1O95397 391 aa17.23■□□□□ 0.35
EFCAB11-207ENST00000555608 TXNP10599 105 aaKnown RBP17.23■□□□□ 0.35
EFCAB11-207ENST00000555608 EPHB4P54760 987 aa17.23■□□□□ 0.35
EFCAB11-207ENST00000555608 ITGA7Q13683 1181 aa17.23■□□□□ 0.35
EFCAB11-207ENST00000555608 CMTR1Q8N1G2 835 aaKnown RBP17.23■□□□□ 0.35
EFCAB11-207ENST00000555608 DEFB123Q8N688 67 aa17.23■□□□□ 0.35
EFCAB11-207ENST00000555608 CTCFLQ8NI51 663 aaPredicted RBP17.23■□□□□ 0.35
EFCAB11-207ENST00000555608 PPP1R13LQ8WUF5 828 aa17.23■□□□□ 0.35
EFCAB11-207ENST00000555608 TMEM87BQ96K49 555 aa17.23■□□□□ 0.35
EFCAB11-207ENST00000555608 TCEANC2Q96MN5 208 aa17.23■□□□□ 0.35
EFCAB11-207ENST00000555608 PXMP2Q9NR77 195 aa17.23■□□□□ 0.35
EFCAB11-207ENST00000555608 MYH7BA7E2Y1 1941 aa17.22■□□□□ 0.35
EFCAB11-207ENST00000555608 B4DLN1 442 aa17.22■□□□□ 0.35
EFCAB11-207ENST00000555608 TLR3O15455 904 aaKnown RBP17.22■□□□□ 0.35
EFCAB11-207ENST00000555608 CABYRO75952 493 aa17.22■□□□□ 0.35
EFCAB11-207ENST00000555608 MRPL12P52815 198 aaKnown RBP17.22■□□□□ 0.35
EFCAB11-207ENST00000555608 TTLL4Q14679 1199 aa17.22■□□□□ 0.35
EFCAB11-207ENST00000555608 LY6KQ17RY6 165 aa17.22■□□□□ 0.35
EFCAB11-207ENST00000555608 SLC43A3Q8NBI5 491 aa17.22■□□□□ 0.35
EFCAB11-207ENST00000555608 IL31RAQ8NI17 732 aa17.22■□□□□ 0.35
EFCAB11-207ENST00000555608 SCN10AQ9Y5Y9 1956 aa17.22■□□□□ 0.35
EFCAB11-207ENST00000555608 PNMA6FA0A0J9YX94 578 aa17.21■□□□□ 0.35
EFCAB11-207ENST00000555608 NKRFO15226 690 aaKnown RBP eCLIP17.21■□□□□ 0.35
EFCAB11-207ENST00000555608 MYCLP12524 364 aaPredicted RBP17.21■□□□□ 0.35
EFCAB11-207ENST00000555608 CPT1AP50416 773 aa17.21■□□□□ 0.35
EFCAB11-207ENST00000555608 PURAQ00577 322 aaKnown RBP17.21■□□□□ 0.35
EFCAB11-207ENST00000555608 GHRHRQ02643 423 aa17.21■□□□□ 0.35
EFCAB11-207ENST00000555608 FPGSQ05932 587 aa17.21■□□□□ 0.35
EFCAB11-207ENST00000555608 STXBP2Q15833 593 aa17.21■□□□□ 0.35
EFCAB11-207ENST00000555608 ADCK5Q3MIX3 580 aa17.21■□□□□ 0.35
EFCAB11-207ENST00000555608 RASEFQ8IZ41 740 aa17.21■□□□□ 0.35
EFCAB11-207ENST00000555608 ZFP91Q96JP5 570 aaPredicted RBP17.21■□□□□ 0.35
EFCAB11-207ENST00000555608 MTA3Q9BTC8 594 aa17.21■□□□□ 0.35
EFCAB11-207ENST00000555608 MAF1Q9H063 256 aa17.21■□□□□ 0.35
EFCAB11-207ENST00000555608 DOCK5Q9H7D0 1870 aa17.2■□□□□ 0.34
EFCAB11-207ENST00000555608 B4GALT4O60513 344 aa17.2■□□□□ 0.34
EFCAB11-207ENST00000555608 TIMP1P01033 207 aa17.2■□□□□ 0.34
EFCAB11-207ENST00000555608 CD4P01730 458 aa17.2■□□□□ 0.34
EFCAB11-207ENST00000555608 NEFLP07196 543 aa17.2■□□□□ 0.34
EFCAB11-207ENST00000555608 NR3C2P08235 984 aa17.2■□□□□ 0.34
EFCAB11-207ENST00000555608 KIF5BP33176 963 aa17.2■□□□□ 0.34
EFCAB11-207ENST00000555608 RNF20Q5VTR2 975 aa17.2■□□□□ 0.34
EFCAB11-207ENST00000555608 CCDC62Q6P9F0 684 aa17.2■□□□□ 0.34
EFCAB11-207ENST00000555608 FCHSD1Q86WN1 690 aa17.2■□□□□ 0.34
EFCAB11-207ENST00000555608 MICU3Q86XE3 530 aa17.2■□□□□ 0.34
EFCAB11-207ENST00000555608 SRBD1Q8N5C6 995 aaKnown RBP17.2■□□□□ 0.34
EFCAB11-207ENST00000555608 IWS1Q96ST2 819 aa17.2■□□□□ 0.34
EFCAB11-207ENST00000555608 PDCD2LQ9BRP1 358 aa17.2■□□□□ 0.34
EFCAB11-207ENST00000555608 SPZ1Q9BXG8 430 aa17.2■□□□□ 0.34
EFCAB11-207ENST00000555608 TRPV6Q9H1D0 765 aa17.2■□□□□ 0.34
EFCAB11-207ENST00000555608 POLR3EQ9NVU0 708 aa17.2■□□□□ 0.34
EFCAB11-207ENST00000555608 UMODL1Q5DID0 1318 aa17.2■□□□□ 0.34
EFCAB11-207ENST00000555608 hCG_1642624A0A1W2PR95 340 aa17.19■□□□□ 0.34
EFCAB11-207ENST00000555608 GCOM1H8Y6P7 765 aaPredicted RBP17.19■□□□□ 0.34
EFCAB11-207ENST00000555608 SORBS3O60504 671 aa17.19■□□□□ 0.34
EFCAB11-207ENST00000555608 POLR2MP0CAP2 368 aa17.19■□□□□ 0.34
EFCAB11-207ENST00000555608 CYP2C18P33260 490 aa17.19■□□□□ 0.34
EFCAB11-207ENST00000555608 ARHGAP1Q07960 439 aa17.19■□□□□ 0.34
EFCAB11-207ENST00000555608 PGM5Q15124 567 aa17.19■□□□□ 0.34
EFCAB11-207ENST00000555608 GPR153Q6NV75 609 aa17.19■□□□□ 0.34
EFCAB11-207ENST00000555608 SLC17A8Q8NDX2 589 aa17.19■□□□□ 0.34
EFCAB11-207ENST00000555608 RRP36Q96EU6 259 aaKnown RBP17.19■□□□□ 0.34
EFCAB11-207ENST00000555608 NEK1Q96PY6 1258 aa17.19■□□□□ 0.34
EFCAB11-207ENST00000555608 MAP3K14Q99558 947 aa17.19■□□□□ 0.34
EFCAB11-207ENST00000555608 MTG1Q9BT17 334 aaPredicted RBP17.19■□□□□ 0.34
EFCAB11-207ENST00000555608 SLC12A7Q9Y666 1083 aa17.19■□□□□ 0.34
EFCAB11-207ENST00000555608 TANC1Q9C0D5 1861 aa17.18■□□□□ 0.34
EFCAB11-207ENST00000555608 GH1P01241 217 aa17.18■□□□□ 0.34
EFCAB11-207ENST00000555608 MMP3P08254 477 aa17.18■□□□□ 0.34
EFCAB11-207ENST00000555608 LIFRP42702 1097 aa17.18■□□□□ 0.34
EFCAB11-207ENST00000555608 CHMP4BP1P59074 171 aa17.18■□□□□ 0.34
EFCAB11-207ENST00000555608 TMTC2Q8N394 836 aa17.18■□□□□ 0.34
EFCAB11-207ENST00000555608 CCDC82Q8N4S0 544 aa17.18■□□□□ 0.34
EFCAB11-207ENST00000555608 AFG1LQ8WV93 481 aa17.18■□□□□ 0.34
EFCAB11-207ENST00000555608 RNPC3Q96LT9 517 aaKnown RBP17.18■□□□□ 0.34
EFCAB11-207ENST00000555608 ALDH8A1Q9H2A2 487 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms