RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 CDC27P30260 824 aa15.83■□□□□ 0.12
SNX6-203ENST00000555416 NKX3-2P78367 333 aa15.83■□□□□ 0.12
SNX6-203ENST00000555416 SNX17Q15036 470 aa15.83■□□□□ 0.12
SNX6-203ENST00000555416 PWP2Q15269 919 aaKnown RBP15.83■□□□□ 0.12
SNX6-203ENST00000555416 TRIM60Q495X7 471 aa15.83■□□□□ 0.12
SNX6-203ENST00000555416 BLOC1S2Q6QNY1 142 aa15.83■□□□□ 0.12
SNX6-203ENST00000555416 CHRDL2Q6WN34 429 aa15.83■□□□□ 0.12
SNX6-203ENST00000555416 NSUN6Q8TEA1 469 aaKnown RBP15.83■□□□□ 0.12
SNX6-203ENST00000555416 COPS5Q92905 334 aa15.83■□□□□ 0.12
SNX6-203ENST00000555416 RRP36Q96EU6 259 aaKnown RBP15.83■□□□□ 0.12
SNX6-203ENST00000555416 ZFP91Q96JP5 570 aaPredicted RBP15.83■□□□□ 0.12
SNX6-203ENST00000555416 LZTS2Q9BRK4 669 aa15.83■□□□□ 0.12
SNX6-203ENST00000555416 TSEN34Q9BSV6 310 aaKnown RBP15.83■□□□□ 0.12
SNX6-203ENST00000555416 WDR11Q9BZH6 1224 aa15.83■□□□□ 0.12
SNX6-203ENST00000555416 PRO3102Q9H379 93 aa15.83■□□□□ 0.12
SNX6-203ENST00000555416 PXMP2Q9NR77 195 aa15.83■□□□□ 0.12
SNX6-203ENST00000555416 ATP11BQ9Y2G3 1177 aa15.83■□□□□ 0.12
SNX6-203ENST00000555416 ZBTB43O43298 467 aa15.82■□□□□ 0.12
SNX6-203ENST00000555416 ASGR1P07306 291 aa15.82■□□□□ 0.12
SNX6-203ENST00000555416 HMGB1P09429 215 aaKnown RBP15.82■□□□□ 0.12
SNX6-203ENST00000555416 GNAQP50148 359 aa15.82■□□□□ 0.12
SNX6-203ENST00000555416 DUSP28Q4G0W2 176 aa15.82■□□□□ 0.12
SNX6-203ENST00000555416 GNASQ5JWF2 1037 aa15.82■□□□□ 0.12
SNX6-203ENST00000555416 BRF1Q92994 677 aa15.82■□□□□ 0.12
SNX6-203ENST00000555416 MAF1Q9H063 256 aa15.82■□□□□ 0.12
SNX6-203ENST00000555416 CNTNAP5Q8WYK1 1306 aa15.82■□□□□ 0.12
SNX6-203ENST00000555416 GOLGA8AA7E2F4 631 aa15.81■□□□□ 0.12
SNX6-203ENST00000555416 GOLGA8BA8MQT2 603 aa15.81■□□□□ 0.12
SNX6-203ENST00000555416 EPB41L2O43491 1005 aaKnown RBP15.81■□□□□ 0.12
SNX6-203ENST00000555416 RGS20O76081 388 aa15.81■□□□□ 0.12
SNX6-203ENST00000555416 SEC24BO95487 1268 aa15.81■□□□□ 0.12
SNX6-203ENST00000555416 NR3C2P08235 984 aa15.81■□□□□ 0.12
SNX6-203ENST00000555416 RTN1Q16799 776 aa15.81■□□□□ 0.12
SNX6-203ENST00000555416 ARHGEF16Q5VV41 709 aa15.81■□□□□ 0.12
SNX6-203ENST00000555416 USP17L6PQ6QN14 398 aa15.81■□□□□ 0.12
SNX6-203ENST00000555416 SH3RF1Q7Z6J0 888 aa15.81■□□□□ 0.12
SNX6-203ENST00000555416 FCHSD1Q86WN1 690 aa15.81■□□□□ 0.12
SNX6-203ENST00000555416 GPKOWQ92917 476 aaPredicted RBP eCLIP15.81■□□□□ 0.12
SNX6-203ENST00000555416 PDCD2LQ9BRP1 358 aa15.81■□□□□ 0.12
SNX6-203ENST00000555416 AGXT2Q9BYV1 514 aa15.81■□□□□ 0.12
SNX6-203ENST00000555416 MOXD2PA6NHM9 499 aa15.8■□□□□ 0.12
SNX6-203ENST00000555416 GCOM1H8Y6P7 765 aaPredicted RBP15.8■□□□□ 0.12
SNX6-203ENST00000555416 POLR2MP0CAP2 368 aa15.8■□□□□ 0.12
SNX6-203ENST00000555416 ADD1P35611 737 aaKnown RBP15.8■□□□□ 0.12
SNX6-203ENST00000555416 TLE2Q04725 743 aa15.8■□□□□ 0.12
SNX6-203ENST00000555416 FSCN1Q16658 493 aaKnown RBP15.8■□□□□ 0.12
SNX6-203ENST00000555416 TYW1BQ6NUM6 668 aa15.8■□□□□ 0.12
SNX6-203ENST00000555416 CCDC62Q6P9F0 684 aa15.8■□□□□ 0.12
SNX6-203ENST00000555416 CXCL17Q6UXB2 119 aa15.8■□□□□ 0.12
SNX6-203ENST00000555416 SYNE3Q6ZMZ3 975 aa15.8■□□□□ 0.12
SNX6-203ENST00000555416 SEPT14Q6ZU15 432 aa15.8■□□□□ 0.12
SNX6-203ENST00000555416 IWS1Q96ST2 819 aa15.8■□□□□ 0.12
SNX6-203ENST00000555416 LARP6Q9BRS8 491 aaKnown RBP15.8■□□□□ 0.12
SNX6-203ENST00000555416 UPF3BQ9BZI7 483 aaKnown RBP15.8■□□□□ 0.12
SNX6-203ENST00000555416 ZSWIM6Q9HCJ5 1215 aa15.8■□□□□ 0.12
SNX6-203ENST00000555416 RBM27Q9P2N5 1060 aaKnown RBP15.8■□□□□ 0.12
SNX6-203ENST00000555416 SEC63Q9UGP8 760 aaKnown RBP15.8■□□□□ 0.12
SNX6-203ENST00000555416 NAP1L2Q9ULW6 460 aaPredicted RBP15.8■□□□□ 0.12
SNX6-203ENST00000555416 TRIOBPQ9H2D6 2365 aa15.8■□□□□ 0.12
SNX6-203ENST00000555416 GRIN2DO15399 1336 aa15.79■□□□□ 0.12
SNX6-203ENST00000555416 MEIS2O14770 477 aa15.79■□□□□ 0.12
SNX6-203ENST00000555416 MAGEA10P43363 369 aaPredicted RBP15.79■□□□□ 0.12
SNX6-203ENST00000555416 FGD1P98174 961 aa15.79■□□□□ 0.12
SNX6-203ENST00000555416 TOB2Q14106 344 aaPredicted RBP15.79■□□□□ 0.12
SNX6-203ENST00000555416 PGM5Q15124 567 aa15.79■□□□□ 0.12
SNX6-203ENST00000555416 LY6KQ17RY6 165 aa15.79■□□□□ 0.12
SNX6-203ENST00000555416 HABP4Q5JVS0 413 aaKnown RBP15.79■□□□□ 0.12
SNX6-203ENST00000555416 C1orf53Q5VUE5 145 aa15.79■□□□□ 0.12
SNX6-203ENST00000555416 RUFY3Q7L099 469 aa15.79■□□□□ 0.12
SNX6-203ENST00000555416 FBXL16Q8N461 479 aa15.79■□□□□ 0.12
SNX6-203ENST00000555416 SCFD2Q8WU76 684 aa15.79■□□□□ 0.12
SNX6-203ENST00000555416 GDF15Q99988 308 aa15.79■□□□□ 0.12
SNX6-203ENST00000555416 AP5M1Q9H0R1 490 aa15.79■□□□□ 0.12
SNX6-203ENST00000555416 SPC25Q9HBM1 224 aa15.79■□□□□ 0.12
SNX6-203ENST00000555416 STARD7Q9NQZ5 370 aa15.79■□□□□ 0.12
SNX6-203ENST00000555416 Q9Y3F1 56 aa15.79■□□□□ 0.12
SNX6-203ENST00000555416 V9GY48 417 aaPredicted RBP15.79■□□□□ 0.12
SNX6-203ENST00000555416 TRIM43BA6NCK2 446 aa15.78■□□□□ 0.12
SNX6-203ENST00000555416 PPFIA3O75145 1194 aa15.78■□□□□ 0.12
SNX6-203ENST00000555416 TXNP10599 105 aaKnown RBP15.78■□□□□ 0.12
SNX6-203ENST00000555416 MYCLP12524 364 aaPredicted RBP15.78■□□□□ 0.12
SNX6-203ENST00000555416 PSMA5P28066 241 aa15.78■□□□□ 0.12
SNX6-203ENST00000555416 TRAF1Q13077 416 aa15.78■□□□□ 0.12
SNX6-203ENST00000555416 PPP2R5BQ15173 497 aa15.78■□□□□ 0.12
SNX6-203ENST00000555416 STXBP2Q15833 593 aa15.78■□□□□ 0.12
SNX6-203ENST00000555416 WWC2Q6AWC2 1192 aa15.78■□□□□ 0.12
SNX6-203ENST00000555416 VSIG10LQ86VR7 867 aa15.78■□□□□ 0.12
SNX6-203ENST00000555416 SAMD3Q8N6K7 520 aa15.78■□□□□ 0.12
SNX6-203ENST00000555416 PCSK9Q8NBP7 692 aaKnown RBP15.78■□□□□ 0.12
SNX6-203ENST00000555416 TRIM43Q96BQ3 446 aaPredicted RBP15.78■□□□□ 0.12
SNX6-203ENST00000555416 PDLIM7Q9NR12 457 aa15.78■□□□□ 0.12
SNX6-203ENST00000555416 RBM28Q9NW13 759 aaKnown RBP15.78■□□□□ 0.12
SNX6-203ENST00000555416 MAP3K20Q9NYL2 800 aaKnown RBP15.78■□□□□ 0.12
SNX6-203ENST00000555416 KIAA1217Q5T5P2 1943 aa15.78■□□□□ 0.12
SNX6-203ENST00000555416 FRMPD4Q14CM0 1322 aa15.77■□□□□ 0.12
SNX6-203ENST00000555416 PQBP1O60828 265 aaKnown RBP15.77■□□□□ 0.12
SNX6-203ENST00000555416 ITGB8P26012 769 aa15.77■□□□□ 0.12
SNX6-203ENST00000555416 PDIA3P30101 505 aaKnown RBP15.77■□□□□ 0.12
SNX6-203ENST00000555416 METAP2P50579 478 aaKnown RBP eCLIP15.77■□□□□ 0.12
SNX6-203ENST00000555416 CDK7P50613 346 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms