RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 FAM13BQ9NYF5 915 aa11.55□□□□□ -0.56
NEK9-205ENST00000555405 RBPJLQ9UBG7 517 aa11.55□□□□□ -0.56
NEK9-205ENST00000555405 SCN4AP35499 1836 aa11.55□□□□□ -0.56
NEK9-205ENST00000555405 PTMSP20962 102 aa11.55□□□□□ -0.56
NEK9-205ENST00000555405 PLCB2Q00722 1185 aa11.55□□□□□ -0.56
NEK9-205ENST00000555405 KLHL40Q2TBA0 621 aa11.55□□□□□ -0.56
NEK9-205ENST00000555405 ATL3Q6DD88 541 aa11.55□□□□□ -0.56
NEK9-205ENST00000555405 GPAT2Q6NUI2 795 aa11.55□□□□□ -0.56
NEK9-205ENST00000555405 PPP1R18Q6NYC8 613 aa11.55□□□□□ -0.56
NEK9-205ENST00000555405 CLEC17AQ6ZS10 378 aa11.55□□□□□ -0.56
NEK9-205ENST00000555405 SYTL5Q8TDW5 730 aaPredicted RBP11.55□□□□□ -0.56
NEK9-205ENST00000555405 CLEC4DQ8WXI8 215 aa11.55□□□□□ -0.56
NEK9-205ENST00000555405 MS4A4AQ96JQ5 239 aa11.55□□□□□ -0.56
NEK9-205ENST00000555405 TNMDQ9H2S6 317 aa11.55□□□□□ -0.56
NEK9-205ENST00000555405 A1CFQ9NQ94 594 aaKnown RBP11.55□□□□□ -0.56
NEK9-205ENST00000555405 PNMA3Q9UL41 463 aa11.55□□□□□ -0.56
NEK9-205ENST00000555405 POTEMA6NI47 508 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 POTEB2H3BUK9 544 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 TULP1O00294 542 aaPredicted RBP11.54□□□□□ -0.56
NEK9-205ENST00000555405 PFKFB1P16118 471 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 ADALQ6DHV7 355 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 SHC4Q6S5L8 630 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 LBX2Q6XYB7 198 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 DAGLBQ8NCG7 672 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 GLT8D2Q9H1C3 349 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 TCEAL9Q9UHQ7 104 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 SAMM50Q9Y512 469 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 IVNS1ABPQ9Y6Y0 642 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 FOSP01100 380 aaPredicted RBP11.54□□□□□ -0.56
NEK9-205ENST00000555405 OR52Z1P0C646 297 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 KCTD2Q14681 263 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 GRAMD1CQ8IYS0 662 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 SYMPKQ92797 1274 aaKnown RBP11.54□□□□□ -0.56
NEK9-205ENST00000555405 NUP62CLQ9H1M0 184 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 TTC12Q9H892 705 aaPredicted RBP11.54□□□□□ -0.56
NEK9-205ENST00000555405 M0R2N6 131 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 CHMP4BP1P59074 171 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 KARSQ15046 597 aaKnown RBP11.54□□□□□ -0.56
NEK9-205ENST00000555405 NCAPH2Q6IBW4 605 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 POTEEQ6S8J3 1075 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 SEPT14Q6ZU15 432 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 RASAL3Q86YV0 1011 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 SYAP1Q96A49 352 aaPredicted RBP11.54□□□□□ -0.56
NEK9-205ENST00000555405 KCNH3Q9ULD8 1083 aa11.54□□□□□ -0.56
NEK9-205ENST00000555405 FAM86B1E9PN63 330 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 IGF2BP3O00425 579 aaKnown RBP eCLIP11.53□□□□□ -0.56
NEK9-205ENST00000555405 PLA2G6O60733 806 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 CUTAO60888 179 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 FAM86B2P0C5J1 330 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 CASP1P29466 404 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 CYP4A11Q02928 519 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 CDK5RAP3Q96JB5 506 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 EHMT1Q9H9B1 1298 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 FBXO2Q9UK22 296 aaPredicted RBP11.53□□□□□ -0.56
NEK9-205ENST00000555405 PCDHA12Q9UN75 941 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 ZNF202O95125 648 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 PTPREP23469 700 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 DEFB115Q30KQ5 88 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 AXDND1Q5T1B0 1012 aaPredicted RBP11.53□□□□□ -0.56
NEK9-205ENST00000555405 CNNM3Q8NE01 707 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 GPRC5AQ8NFJ5 357 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 TRAPPC10P48553 1259 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 ERVK-9P63128 1117 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 ERVK-24P63145 666 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 AP3B2Q13367 1082 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 TMEM266Q2M3C6 531 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 WDR11Q9BZH6 1224 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 LRWD1Q9UFC0 647 aa11.53□□□□□ -0.56
NEK9-205ENST00000555405 SRPRBQ9Y5M8 271 aaKnown RBP11.53□□□□□ -0.56
NEK9-205ENST00000555405 CENPFP49454 3210 aa11.52□□□□□ -0.56
NEK9-205ENST00000555405 ARP10275 920 aa11.52□□□□□ -0.56
NEK9-205ENST00000555405 HOXA7P31268 230 aaPredicted RBP11.52□□□□□ -0.56
NEK9-205ENST00000555405 TXLNAP40222 546 aa11.52□□□□□ -0.56
NEK9-205ENST00000555405 DPP9Q86TI2 863 aa11.52□□□□□ -0.56
NEK9-205ENST00000555405 POLD4Q9HCU8 107 aa11.52□□□□□ -0.56
NEK9-205ENST00000555405 SERTAD1Q9UHV2 236 aa11.52□□□□□ -0.56
NEK9-205ENST00000555405 ATP2C1P98194 919 aaPredicted RBP11.52□□□□□ -0.57
NEK9-205ENST00000555405 FSTL1Q12841 308 aa11.52□□□□□ -0.57
NEK9-205ENST00000555405 MOGSQ13724 837 aa11.52□□□□□ -0.57
NEK9-205ENST00000555405 IL17AQ16552 155 aa11.52□□□□□ -0.57
NEK9-205ENST00000555405 ZSCAN23Q3MJ62 389 aa11.52□□□□□ -0.57
NEK9-205ENST00000555405 MMP19Q99542 508 aa11.52□□□□□ -0.57
NEK9-205ENST00000555405 WDR90Q96KV7 1748 aa11.52□□□□□ -0.57
NEK9-205ENST00000555405 FOXN1O15353 648 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 PPP6R2O75170 966 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 BMP15O95972 392 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 MYCNP04198 464 aaPredicted RBP11.51□□□□□ -0.57
NEK9-205ENST00000555405 NR3C2P08235 984 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 FDX1P10109 184 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 CLK2P49760 499 aaKnown RBP11.51□□□□□ -0.57
NEK9-205ENST00000555405 RABGAP1Q9Y3P9 1069 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 ELP1O95163 1332 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 MEIS1O00470 390 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 TRPA1O75762 1119 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 CMA1P23946 247 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 FAM160A1Q05DH4 1040 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 RAD51AP2Q09MP3 1159 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 LONRF3Q496Y0 759 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 REPS2Q8NFH8 660 aa11.51□□□□□ -0.57
NEK9-205ENST00000555405 SNX29Q8TEQ0 813 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms