RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 FAM177A1Q8N128 213 aaPredicted RBP12.2□□□□□ -0.46
TMEM260-206ENST00000555046 CMTR1Q8N1G2 835 aaKnown RBP12.2□□□□□ -0.46
TMEM260-206ENST00000555046 RNF26Q9BY78 433 aaPredicted RBP12.2□□□□□ -0.46
TMEM260-206ENST00000555046 FAM217BQ9NTX9 383 aaPredicted RBP12.2□□□□□ -0.46
TMEM260-206ENST00000555046 FLRT1Q9NZU1 646 aa12.2□□□□□ -0.46
TMEM260-206ENST00000555046 FAM184BQ9ULE4 1060 aa12.2□□□□□ -0.46
TMEM260-206ENST00000555046 LIMCH1Q9UPQ0 1083 aa12.2□□□□□ -0.46
TMEM260-206ENST00000555046 MYH4Q9Y623 1939 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 PIK3CDO00329 1044 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 SEPT4O43236 478 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 PFKFB2O60825 505 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 FARP2O94887 1054 aaPredicted RBP12.19□□□□□ -0.46
TMEM260-206ENST00000555046 SGPL1O95470 568 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 XBP1P17861 261 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 GNA11P29992 359 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 GJA8P48165 433 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 HSD17B4P51659 736 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 CCT2P78371 535 aaKnown RBP12.19□□□□□ -0.46
TMEM260-206ENST00000555046 CNTN2Q02246 1040 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 GHRHRQ02643 423 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 FUT2Q10981 343 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 PPP1R18Q6NYC8 613 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 ARMCX2Q7L311 632 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 HEATR3Q7Z4Q2 680 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 MAFAQ8NHW3 353 aaPredicted RBP12.19□□□□□ -0.46
TMEM260-206ENST00000555046 SMARCC2Q8TAQ2 1214 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 SYTL5Q8TDW5 730 aaPredicted RBP12.19□□□□□ -0.46
TMEM260-206ENST00000555046 WASF1Q92558 559 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 TBC1D32Q96NH3 1257 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 RMDN3Q96TC7 470 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.19□□□□□ -0.46
TMEM260-206ENST00000555046 UNC93B1Q9H1C4 597 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 EHMT1Q9H9B1 1298 aa12.19□□□□□ -0.46
TMEM260-206ENST00000555046 PAK6Q9NQU5 681 aaPredicted RBP12.19□□□□□ -0.46
TMEM260-206ENST00000555046 NID2Q14112 1375 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 SOWAHBA6NEL2 793 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 PPP1R11O60927 126 aaPredicted RBP12.18□□□□□ -0.46
TMEM260-206ENST00000555046 FOSP01100 380 aaPredicted RBP12.18□□□□□ -0.46
TMEM260-206ENST00000555046 CYBAP13498 195 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 SCG2P13521 617 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 AKR1A1P14550 325 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 NAPAP54920 295 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 PDE4DQ08499 809 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 STK3Q13188 491 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 ACVR2BQ13705 512 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 STXBP2Q15833 593 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 PFKFB3Q16875 520 aaPredicted RBP12.18□□□□□ -0.46
TMEM260-206ENST00000555046 SLC35G1Q2M3R5 365 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 IQSEC1Q6DN90 963 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 XRRA1Q6P2D8 792 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 TDHQ8IZJ6 230 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 ARRDC4Q8NCT1 418 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 BICD2Q8TD16 824 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 MORC4Q8TE76 937 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 DEFB118Q96PH6 123 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 SLC26A6Q9BXS9 759 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 SPC25Q9HBM1 224 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 VTA1Q9NP79 307 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 SH3GLB2Q9NR46 395 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 SH2B1Q9NRF2 756 aaPredicted RBP12.18□□□□□ -0.46
TMEM260-206ENST00000555046 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.18□□□□□ -0.46
TMEM260-206ENST00000555046 BARHL2Q9NY43 387 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 DDX20Q9UHI6 824 aaKnown RBP12.18□□□□□ -0.46
TMEM260-206ENST00000555046 TPCN1Q9ULQ1 816 aa12.18□□□□□ -0.46
TMEM260-206ENST00000555046 EIF3JO75822 258 aaKnown RBP12.17□□□□□ -0.46
TMEM260-206ENST00000555046 STAM2O75886 525 aa12.17□□□□□ -0.46
TMEM260-206ENST00000555046 DEXIO95424 95 aa12.17□□□□□ -0.46
TMEM260-206ENST00000555046 SNAI1O95863 264 aaPredicted RBP12.17□□□□□ -0.46
TMEM260-206ENST00000555046 RARBP10826 455 aa12.17□□□□□ -0.46
TMEM260-206ENST00000555046 ALDH5A1P51649 535 aaPredicted RBP12.17□□□□□ -0.46
TMEM260-206ENST00000555046 NTRK3Q16288 839 aa12.17□□□□□ -0.46
TMEM260-206ENST00000555046 KCNV1Q6PIU1 500 aa12.17□□□□□ -0.46
TMEM260-206ENST00000555046 ANKLE1Q8NAG6 615 aa12.17□□□□□ -0.46
TMEM260-206ENST00000555046 CCDC148Q8NFR7 591 aa12.17□□□□□ -0.46
TMEM260-206ENST00000555046 U2AF1L4Q8WU68 220 aaKnown RBP12.17□□□□□ -0.46
TMEM260-206ENST00000555046 FAM161BQ96MY7 647 aa12.17□□□□□ -0.46
TMEM260-206ENST00000555046 C6orf50Q9HD87 102 aa12.17□□□□□ -0.46
TMEM260-206ENST00000555046 CNTNAP5Q8WYK1 1306 aa12.16□□□□□ -0.46
TMEM260-206ENST00000555046 RLFQ13129 1914 aa12.16□□□□□ -0.46
TMEM260-206ENST00000555046 SMCO2A6NFE2 343 aa12.16□□□□□ -0.46
TMEM260-206ENST00000555046 SPDYE3A6NKU9 549 aa12.16□□□□□ -0.46
TMEM260-206ENST00000555046 TRIM32Q13049 653 aa12.16□□□□□ -0.46
TMEM260-206ENST00000555046 FAM109BQ6ICB4 259 aaPredicted RBP12.16□□□□□ -0.46
TMEM260-206ENST00000555046 GALNT17Q6IS24 598 aa12.16□□□□□ -0.46
TMEM260-206ENST00000555046 SLC30A10Q6XR72 485 aa12.16□□□□□ -0.46
TMEM260-206ENST00000555046 NOL8Q76FK4 1167 aaKnown RBP12.16□□□□□ -0.46
TMEM260-206ENST00000555046 FCHSD1Q86WN1 690 aa12.16□□□□□ -0.46
TMEM260-206ENST00000555046 TBC1D5Q92609 795 aa12.16□□□□□ -0.46
TMEM260-206ENST00000555046 TAAR1Q96RJ0 339 aa12.16□□□□□ -0.46
TMEM260-206ENST00000555046 LARP6Q9BRS8 491 aaKnown RBP12.16□□□□□ -0.46
TMEM260-206ENST00000555046 LLPHQ9BRT6 129 aaKnown RBP12.16□□□□□ -0.46
TMEM260-206ENST00000555046 CRISPLD2Q9H0B8 497 aa12.16□□□□□ -0.46
TMEM260-206ENST00000555046 NCOA5Q9HCD5 579 aaKnown RBP12.16□□□□□ -0.46
TMEM260-206ENST00000555046 RIC8AQ9NPQ8 531 aa12.16□□□□□ -0.46
TMEM260-206ENST00000555046 ZHX1Q9UKY1 873 aaPredicted RBP12.16□□□□□ -0.46
TMEM260-206ENST00000555046 Q9Y3F1 56 aa12.16□□□□□ -0.46
TMEM260-206ENST00000555046 hCG_1642624A0A1W2PR95 340 aa12.15□□□□□ -0.46
TMEM260-206ENST00000555046 ESYT2A0FGR8 921 aa12.15□□□□□ -0.46
TMEM260-206ENST00000555046 NKRFO15226 690 aaKnown RBP eCLIP12.15□□□□□ -0.46
TMEM260-206ENST00000555046 DUSP11O75319 330 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms