RNA–Protein interactions for RNA: ENST00000555034.5

FOXN3-208, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-208ENST00000555034 WDR19Q8NEZ3 1342 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 CD4P01730 458 aa9.04□□□□□ -0.96
FOXN3-208ENST00000555034 FGAP02671 866 aa9.04□□□□□ -0.96
FOXN3-208ENST00000555034 DNAJB2P25686 324 aa9.04□□□□□ -0.96
FOXN3-208ENST00000555034 PDE4AP27815 886 aa9.04□□□□□ -0.96
FOXN3-208ENST00000555034 CNTN2Q02246 1040 aa9.04□□□□□ -0.96
FOXN3-208ENST00000555034 PTPN11Q06124 597 aaPredicted RBP9.04□□□□□ -0.96
FOXN3-208ENST00000555034 TRAF1Q13077 416 aa9.04□□□□□ -0.96
FOXN3-208ENST00000555034 ITGA7Q13683 1181 aa9.04□□□□□ -0.96
FOXN3-208ENST00000555034 CCDC96Q2M329 555 aa9.04□□□□□ -0.96
FOXN3-208ENST00000555034 DUSP28Q4G0W2 176 aa9.04□□□□□ -0.96
FOXN3-208ENST00000555034 RASIP1Q5U651 963 aa9.04□□□□□ -0.96
FOXN3-208ENST00000555034 TYW1BQ6NUM6 668 aa9.04□□□□□ -0.96
FOXN3-208ENST00000555034 MFSD6Q6ZSS7 791 aa9.04□□□□□ -0.96
FOXN3-208ENST00000555034 KCTD1Q719H9 257 aa9.04□□□□□ -0.96
FOXN3-208ENST00000555034 IQCA1Q86XH1 822 aa9.04□□□□□ -0.96
FOXN3-208ENST00000555034 ZNF775Q96BV0 537 aaPredicted RBP9.04□□□□□ -0.96
FOXN3-208ENST00000555034 IL23AQ9NPF7 189 aa9.04□□□□□ -0.96
FOXN3-208ENST00000555034 TOMM22Q9NS69 142 aa9.04□□□□□ -0.96
FOXN3-208ENST00000555034 MSRAQ9UJ68 235 aa9.04□□□□□ -0.96
FOXN3-208ENST00000555034 GTF3C3Q9Y5Q9 886 aa9.04□□□□□ -0.96
FOXN3-208ENST00000555034 LTBP2Q14767 1821 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 RBM47A0AV96 593 aaKnown RBP9.03□□□□□ -0.96
FOXN3-208ENST00000555034 DYNC1LI2O43237 492 aaPredicted RBP9.03□□□□□ -0.96
FOXN3-208ENST00000555034 FGBP02675 491 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 NEFLP07196 543 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 HSPD1P10809 573 aaKnown RBP9.03□□□□□ -0.96
FOXN3-208ENST00000555034 ITGB8P26012 769 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 RFC2P35250 354 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 CTDSPL2Q05D32 466 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 TMEM240Q5SV17 173 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 AKNAD1Q5T1N1 836 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 SYDE2Q5VT97 1194 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 TAPT1Q6NXT6 567 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 NSMFQ6X4W1 530 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 KIAA1211Q6ZU35 1233 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 SCFD2Q8WU76 684 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 HERVK_113Q902F9 699 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 TIFAQ96CG3 184 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 FAM161BQ96MY7 647 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 GAS2L1Q99501 681 aaPredicted RBP9.03□□□□□ -0.96
FOXN3-208ENST00000555034 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.03□□□□□ -0.969e-6■■■■■ 27.7
FOXN3-208ENST00000555034 TTYH1Q9H313 450 aaPredicted RBP9.03□□□□□ -0.96
FOXN3-208ENST00000555034 HIPK3Q9H422 1215 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 OSBPL3Q9H4L5 887 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 ZNF576Q9H609 170 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 CTNNA3Q9UI47 895 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 COL6A3P12111 3177 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 CCDC171Q6TFL3 1326 aa9.03□□□□□ -0.96
FOXN3-208ENST00000555034 MYADML2A6NDP7 307 aa9.02□□□□□ -0.97
FOXN3-208ENST00000555034 ZNF213O14771 459 aa9.02□□□□□ -0.97
FOXN3-208ENST00000555034 CTAGE5O15320 804 aa9.02□□□□□ -0.97
FOXN3-208ENST00000555034 FOXP2O15409 715 aa9.02□□□□□ -0.97
FOXN3-208ENST00000555034 PARNO95453 639 aaKnown RBP9.02□□□□□ -0.97
FOXN3-208ENST00000555034 SNHG28P0DPA3 235 aa9.02□□□□□ -0.97
FOXN3-208ENST00000555034 ACTN1P12814 892 aa9.02□□□□□ -0.97
FOXN3-208ENST00000555034 SMPD1P17405 629 aa9.02□□□□□ -0.97
FOXN3-208ENST00000555034 ALDH5A1P51649 535 aaPredicted RBP9.02□□□□□ -0.97
FOXN3-208ENST00000555034 EPHB4P54760 987 aa9.02□□□□□ -0.97
FOXN3-208ENST00000555034 PDE4DQ08499 809 aa9.02□□□□□ -0.97
FOXN3-208ENST00000555034 BAATQ14032 418 aaPredicted RBP9.02□□□□□ -0.97
FOXN3-208ENST00000555034 CXCL17Q6UXB2 119 aa9.02□□□□□ -0.97
FOXN3-208ENST00000555034 RNF207Q6ZRF8 634 aa9.02□□□□□ -0.97
FOXN3-208ENST00000555034 MCF2L2Q86YR7 1114 aa9.02□□□□□ -0.97
FOXN3-208ENST00000555034 SAMD3Q8N6K7 520 aa9.02□□□□□ -0.97
FOXN3-208ENST00000555034 LENG1Q96BZ8 264 aaPredicted RBP9.02□□□□□ -0.97
FOXN3-208ENST00000555034 TMEM47Q9BQJ4 181 aa9.02□□□□□ -0.97
FOXN3-208ENST00000555034 LARP6Q9BRS8 491 aaKnown RBP9.02□□□□□ -0.97
FOXN3-208ENST00000555034 WDR11Q9BZH6 1224 aa9.02□□□□□ -0.97
FOXN3-208ENST00000555034 CNNM2Q9H8M5 875 aa9.02□□□□□ -0.97
FOXN3-208ENST00000555034 MAP3K20Q9NYL2 800 aaKnown RBP9.02□□□□□ -0.97
FOXN3-208ENST00000555034 COL11A1P12107 1806 aaPredicted RBP9.01□□□□□ -0.97
FOXN3-208ENST00000555034 A0A0C4DFX4 3053 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 PTPDC1A2A3K4 754 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 TRIM6-TRIM34B2RNG4 842 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 ADCY6O43306 1168 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 PDHBP11177 359 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 CSF2RAP15509 400 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 ZNF543Q08ER8 600 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 PPP2R5BQ15173 497 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 MUM1L1Q5H9M0 696 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 TJAP1Q5JTD0 557 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 RRP12Q5JTH9 1297 aaKnown RBP9.01□□□□□ -0.97
FOXN3-208ENST00000555034 NFRKBQ6P4R8 1299 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 ZNF365Q70YC5 407 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 SMC5Q8IY18 1101 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 CCDC155Q8N6L0 562 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 OTUD7AQ8TE49 926 aaPredicted RBP9.01□□□□□ -0.97
FOXN3-208ENST00000555034 MYLIPQ8WY64 445 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 ANKS1AQ92625 1134 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 IWS1Q96ST2 819 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 MTG1Q9BT17 334 aaPredicted RBP9.01□□□□□ -0.97
FOXN3-208ENST00000555034 COL25A1Q9BXS0 654 aaPredicted RBP9.01□□□□□ -0.97
FOXN3-208ENST00000555034 KRT23Q9C075 422 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 SLC28A3Q9HAS3 691 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 ABCB11O95342 1321 aa9.01□□□□□ -0.97
FOXN3-208ENST00000555034 PLXNA1Q9UIW2 1896 aa9□□□□□ -0.97
FOXN3-208ENST00000555034 ZNFX1Q9P2E3 1918 aaKnown RBP9□□□□□ -0.97
FOXN3-208ENST00000555034 C11orf97A0A1B0GVM6 126 aaPredicted RBP9□□□□□ -0.97
FOXN3-208ENST00000555034 A6NJR5 290 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms