RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 NOL8Q76FK4 1167 aaKnown RBP14.28□□□□□ -0.12
SYNE2-214ENST00000554928 MCF2L2Q86YR7 1114 aa14.28□□□□□ -0.12
SYNE2-214ENST00000554928 PHKBQ93100 1093 aa14.28□□□□□ -0.12
SYNE2-214ENST00000554928 ABHD16BQ9H3Z7 469 aa14.28□□□□□ -0.12
SYNE2-214ENST00000554928 SEC63Q9UGP8 760 aaKnown RBP14.28□□□□□ -0.12
SYNE2-214ENST00000554928 TPCN1Q9ULQ1 816 aa14.28□□□□□ -0.12
SYNE2-214ENST00000554928 FRMPD3Q5JV73 1810 aa14.27□□□□□ -0.12
SYNE2-214ENST00000554928 AKR1A1P14550 325 aa14.27□□□□□ -0.13
SYNE2-214ENST00000554928 PKN1Q16512 942 aa14.27□□□□□ -0.13
SYNE2-214ENST00000554928 UBE2SQ16763 222 aa14.27□□□□□ -0.13
SYNE2-214ENST00000554928 HEATR3Q7Z4Q2 680 aa14.27□□□□□ -0.13
SYNE2-214ENST00000554928 FCHSD1Q86WN1 690 aa14.27□□□□□ -0.13
SYNE2-214ENST00000554928 RMDN3Q96TC7 470 aa14.27□□□□□ -0.13
SYNE2-214ENST00000554928 PXMP2Q9NR77 195 aa14.27□□□□□ -0.13
SYNE2-214ENST00000554928 ADD3Q9UEY8 706 aaKnown RBP14.27□□□□□ -0.13
SYNE2-214ENST00000554928 SYNRGQ9UMZ2 1314 aa14.26□□□□□ -0.13
SYNE2-214ENST00000554928 GCOM1H8Y6P7 765 aaPredicted RBP14.26□□□□□ -0.13
SYNE2-214ENST00000554928 HAX1O00165 279 aa14.26□□□□□ -0.13
SYNE2-214ENST00000554928 STXBP3O00186 592 aa14.26□□□□□ -0.13
SYNE2-214ENST00000554928 MEIS2O14770 477 aa14.26□□□□□ -0.13
SYNE2-214ENST00000554928 CTAGE5O15320 804 aa14.26□□□□□ -0.13
SYNE2-214ENST00000554928 ADAMTS4O75173 837 aa14.26□□□□□ -0.13
SYNE2-214ENST00000554928 ARIH2O95376 493 aa14.26□□□□□ -0.13
SYNE2-214ENST00000554928 POLR2MP0CAP2 368 aa14.26□□□□□ -0.13
SYNE2-214ENST00000554928 COL6A1P12109 1028 aa14.26□□□□□ -0.13
SYNE2-214ENST00000554928 SMPD1P17405 629 aa14.26□□□□□ -0.13
SYNE2-214ENST00000554928 LRRC41Q15345 812 aa14.26□□□□□ -0.13
SYNE2-214ENST00000554928 DNERQ8NFT8 737 aa14.26□□□□□ -0.13
SYNE2-214ENST00000554928 XPNPEP3Q9NQH7 507 aa14.26□□□□□ -0.13
SYNE2-214ENST00000554928 FAM184BQ9ULE4 1060 aa14.26□□□□□ -0.13
SYNE2-214ENST00000554928 MSCO60682 206 aa14.25□□□□□ -0.13
SYNE2-214ENST00000554928 RARBP10826 455 aa14.25□□□□□ -0.13
SYNE2-214ENST00000554928 NEK4P51957 841 aa14.25□□□□□ -0.13
SYNE2-214ENST00000554928 PDE4DQ08499 809 aa14.25□□□□□ -0.13
SYNE2-214ENST00000554928 SCRN1Q12765 414 aa14.25□□□□□ -0.13
SYNE2-214ENST00000554928 ANKLE1Q8NAG6 615 aa14.25□□□□□ -0.13
SYNE2-214ENST00000554928 COPS5Q92905 334 aa14.25□□□□□ -0.13
SYNE2-214ENST00000554928 ZNF274Q96GC6 653 aaPredicted RBP14.25□□□□□ -0.13
SYNE2-214ENST00000554928 PDCD2LQ9BRP1 358 aa14.25□□□□□ -0.13
SYNE2-214ENST00000554928 C22orf23Q9BZE7 217 aa14.25□□□□□ -0.13
SYNE2-214ENST00000554928 ALDH8A1Q9H2A2 487 aaPredicted RBP14.25□□□□□ -0.13
SYNE2-214ENST00000554928 GNEQ9Y223 722 aaKnown RBP14.25□□□□□ -0.13
SYNE2-214ENST00000554928 RGS20O76081 388 aa14.24□□□□□ -0.13
SYNE2-214ENST00000554928 NR3C2P08235 984 aa14.24□□□□□ -0.13
SYNE2-214ENST00000554928 BEX3Q00994 111 aa14.24□□□□□ -0.13
SYNE2-214ENST00000554928 TNFAIP2Q03169 654 aa14.24□□□□□ -0.13
SYNE2-214ENST00000554928 ST3GAL1Q11201 340 aa14.24□□□□□ -0.13
SYNE2-214ENST00000554928 PFKFB3Q16875 520 aaPredicted RBP14.24□□□□□ -0.13
SYNE2-214ENST00000554928 ARHGEF16Q5VV41 709 aa14.24□□□□□ -0.13
SYNE2-214ENST00000554928 NECAB1Q8N987 351 aa14.24□□□□□ -0.13
SYNE2-214ENST00000554928 NSUN6Q8TEA1 469 aaKnown RBP14.24□□□□□ -0.13
SYNE2-214ENST00000554928 FERMT2Q96AC1 680 aa14.24□□□□□ -0.13
SYNE2-214ENST00000554928 PGBD1Q96JS3 809 aa14.24□□□□□ -0.13
SYNE2-214ENST00000554928 SLC26A6Q9BXS9 759 aa14.24□□□□□ -0.13
SYNE2-214ENST00000554928 C11orf49Q9H6J7 331 aa14.24□□□□□ -0.13
SYNE2-214ENST00000554928 VTA1Q9NP79 307 aa14.24□□□□□ -0.13
SYNE2-214ENST00000554928 RBM47A0AV96 593 aaKnown RBP14.23□□□□□ -0.13
SYNE2-214ENST00000554928 DNM1LO00429 736 aa14.23□□□□□ -0.13
SYNE2-214ENST00000554928 PRPF3O43395 683 aaKnown RBP14.23□□□□□ -0.13
SYNE2-214ENST00000554928 PFKFB2O60825 505 aa14.23□□□□□ -0.13
SYNE2-214ENST00000554928 DUSP11O75319 330 aaKnown RBP14.23□□□□□ -0.13
SYNE2-214ENST00000554928 CTDNEP1O95476 244 aa14.23□□□□□ -0.13
SYNE2-214ENST00000554928 MYCLP12524 364 aaPredicted RBP14.23□□□□□ -0.13
SYNE2-214ENST00000554928 IFNAR1P17181 557 aa14.23□□□□□ -0.13
SYNE2-214ENST00000554928 RBM25P49756 843 aaKnown RBP14.23□□□□□ -0.13
SYNE2-214ENST00000554928 NAPAP54920 295 aa14.23□□□□□ -0.13
SYNE2-214ENST00000554928 PGM5Q15124 567 aa14.23□□□□□ -0.13
SYNE2-214ENST00000554928 ME3Q16798 604 aa14.23□□□□□ -0.13
SYNE2-214ENST00000554928 CCSAPQ6IQ19 270 aaPredicted RBP14.23□□□□□ -0.13
SYNE2-214ENST00000554928 SEPT14Q6ZU15 432 aa14.23□□□□□ -0.13
SYNE2-214ENST00000554928 NECAB2Q7Z6G3 386 aa14.23□□□□□ -0.13
SYNE2-214ENST00000554928 KLHDC9Q8NEP7 349 aa14.23□□□□□ -0.13
SYNE2-214ENST00000554928 AIFM3Q96NN9 605 aa14.23□□□□□ -0.13
SYNE2-214ENST00000554928 MAF1Q9H063 256 aa14.23□□□□□ -0.13
SYNE2-214ENST00000554928 UPF3AQ9H1J1 476 aaKnown RBP14.23□□□□□ -0.13
SYNE2-214ENST00000554928 PSTPIP2Q9H939 334 aa14.23□□□□□ -0.13
SYNE2-214ENST00000554928 TMEM260Q9NX78 707 aa14.23□□□□□ -0.13
SYNE2-214ENST00000554928 BARHL2Q9NY43 387 aa14.23□□□□□ -0.13
SYNE2-214ENST00000554928 FRMPD4Q14CM0 1322 aa14.22□□□□□ -0.13
SYNE2-214ENST00000554928 LOC102724159A0A0B4J2E5 919 aa14.22□□□□□ -0.13
SYNE2-214ENST00000554928 CCDC196A0A1B0GTZ2 297 aa14.22□□□□□ -0.13
SYNE2-214ENST00000554928 PIK3CDO00329 1044 aa14.22□□□□□ -0.13
SYNE2-214ENST00000554928 DYNC1LI2O43237 492 aaPredicted RBP14.22□□□□□ -0.13
SYNE2-214ENST00000554928 SCG2P13521 617 aa14.22□□□□□ -0.13
SYNE2-214ENST00000554928 ATN1P54259 1190 aaPredicted RBP14.22□□□□□ -0.13
SYNE2-214ENST00000554928 GJA9P57773 515 aa14.22□□□□□ -0.13
SYNE2-214ENST00000554928 MRPS9P82933 396 aaKnown RBP14.22□□□□□ -0.13
SYNE2-214ENST00000554928 TRAF1Q13077 416 aa14.22□□□□□ -0.13
SYNE2-214ENST00000554928 PPP2R5BQ15173 497 aa14.22□□□□□ -0.13
SYNE2-214ENST00000554928 PWP2Q15269 919 aaKnown RBP14.22□□□□□ -0.13
SYNE2-214ENST00000554928 LRRC26Q2I0M4 334 aa14.22□□□□□ -0.13
SYNE2-214ENST00000554928 TLK2Q86UE8 772 aa14.22□□□□□ -0.13
SYNE2-214ENST00000554928 SMARCC2Q8TAQ2 1214 aa14.22□□□□□ -0.13
SYNE2-214ENST00000554928 IWS1Q96ST2 819 aa14.22□□□□□ -0.13
SYNE2-214ENST00000554928 WDR11Q9BZH6 1224 aa14.22□□□□□ -0.13
SYNE2-214ENST00000554928 SENP6Q9GZR1 1112 aaPredicted RBP14.22□□□□□ -0.13
SYNE2-214ENST00000554928 SMCO2A6NFE2 343 aa14.21□□□□□ -0.13
SYNE2-214ENST00000554928 SORBS3O60504 671 aa14.21□□□□□ -0.13
SYNE2-214ENST00000554928 EIF5BO60841 1220 aaKnown RBP14.21□□□□□ -0.13
SYNE2-214ENST00000554928 C6orf222P0C671 652 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms