RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 PCDHA2Q9Y5H9 948 aa7.54□□□□□ -1.2
SCFD1-211ENST00000554437 FUCA1P04066 466 aa7.53□□□□□ -1.2
SCFD1-211ENST00000554437 BCL6P41182 706 aa7.53□□□□□ -1.2
SCFD1-211ENST00000554437 RBM10P98175 930 aaKnown RBP7.53□□□□□ -1.2
SCFD1-211ENST00000554437 KCNT2Q6UVM3 1135 aa7.53□□□□□ -1.2
SCFD1-211ENST00000554437 KISS1RQ969F8 398 aaPredicted RBP7.53□□□□□ -1.2
SCFD1-211ENST00000554437 RNPC3Q96LT9 517 aaKnown RBP7.53□□□□□ -1.2
SCFD1-211ENST00000554437 DIRC2Q96SL1 478 aa7.53□□□□□ -1.2
SCFD1-211ENST00000554437 PHF20Q9BVI0 1012 aa7.53□□□□□ -1.2
SCFD1-211ENST00000554437 GPR27Q9NS67 375 aa7.53□□□□□ -1.2
SCFD1-211ENST00000554437 NPFFR2Q9Y5X5 522 aa7.53□□□□□ -1.2
SCFD1-211ENST00000554437 CCDC163A0A0D9SF12 145 aa7.52□□□□□ -1.21
SCFD1-211ENST00000554437 OR14I1A6ND48 311 aa7.52□□□□□ -1.21
SCFD1-211ENST00000554437 LRRC10BA6NIK2 292 aa7.52□□□□□ -1.21
SCFD1-211ENST00000554437 MPOP05164 745 aa7.52□□□□□ -1.21
SCFD1-211ENST00000554437 GTF2A2P52657 109 aa7.52□□□□□ -1.21
SCFD1-211ENST00000554437 SQSTM1Q13501 440 aa7.52□□□□□ -1.21
SCFD1-211ENST00000554437 MLANAQ16655 118 aa7.52□□□□□ -1.21
SCFD1-211ENST00000554437 RSPO2Q6UXX9 243 aaPredicted RBP7.52□□□□□ -1.21
SCFD1-211ENST00000554437 PRR23BQ6ZRT6 265 aa7.52□□□□□ -1.21
SCFD1-211ENST00000554437 CEP68Q76N32 757 aa7.52□□□□□ -1.21
SCFD1-211ENST00000554437 IRF2BP1Q8IU81 584 aa7.52□□□□□ -1.21
SCFD1-211ENST00000554437 TEX2Q8IWB9 1127 aa7.52□□□□□ -1.21
SCFD1-211ENST00000554437 MTA3Q9BTC8 594 aa7.52□□□□□ -1.21
SCFD1-211ENST00000554437 NSUN3Q9H649 340 aaKnown RBP7.52□□□□□ -1.21
SCFD1-211ENST00000554437 TNFRSF12AQ9NP84 129 aa7.52□□□□□ -1.21
SCFD1-211ENST00000554437 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.52□□□□□ -1.21
SCFD1-211ENST00000554437 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.52□□□□□ -1.21
SCFD1-211ENST00000554437 NUDT19A8MXV4 375 aa7.51□□□□□ -1.21
SCFD1-211ENST00000554437 ERVFRD-1P60508 538 aa7.51□□□□□ -1.21
SCFD1-211ENST00000554437 LSAMPQ13449 338 aa7.51□□□□□ -1.21
SCFD1-211ENST00000554437 STYK1Q6J9G0 422 aa7.51□□□□□ -1.21
SCFD1-211ENST00000554437 CABP7Q86V35 215 aa7.51□□□□□ -1.21
SCFD1-211ENST00000554437 PTPRN2Q92932 1015 aa7.51□□□□□ -1.21
SCFD1-211ENST00000554437 TRMT2BQ96GJ1 504 aaKnown RBP7.51□□□□□ -1.21
SCFD1-211ENST00000554437 FBLN5Q9UBX5 448 aa7.51□□□□□ -1.21
SCFD1-211ENST00000554437 TRAF6Q9Y4K3 522 aa7.51□□□□□ -1.21
SCFD1-211ENST00000554437 MRPL42Q9Y6G3 142 aaKnown RBP7.51□□□□□ -1.21
SCFD1-211ENST00000554437 C22orf46C9J442 243 aa7.5□□□□□ -1.21
SCFD1-211ENST00000554437 MSCO60682 206 aa7.5□□□□□ -1.21
SCFD1-211ENST00000554437 FPR2P25090 351 aa7.5□□□□□ -1.21
SCFD1-211ENST00000554437 RAB3GAP1Q15042 981 aa7.5□□□□□ -1.21
SCFD1-211ENST00000554437 ZNF605Q86T29 641 aa7.5□□□□□ -1.21
SCFD1-211ENST00000554437 JAZF1Q86VZ6 243 aa7.5□□□□□ -1.21
SCFD1-211ENST00000554437 IFNL3Q8IZI9 196 aa7.5□□□□□ -1.21
SCFD1-211ENST00000554437 PLEKHO2Q8TD55 490 aa7.5□□□□□ -1.21
SCFD1-211ENST00000554437 TMEM169Q96HH4 297 aa7.5□□□□□ -1.21
SCFD1-211ENST00000554437 DCP1AQ9NPI6 582 aaPredicted RBP7.5□□□□□ -1.21
SCFD1-211ENST00000554437 FBXL7Q9UJT9 491 aa7.5□□□□□ -1.21
SCFD1-211ENST00000554437 RNF114Q9Y508 228 aa7.5□□□□□ -1.21
SCFD1-211ENST00000554437 ASXL2Q76L83 1435 aa7.5□□□□□ -1.21
SCFD1-211ENST00000554437 ESYT3A0FGR9 886 aa7.49□□□□□ -1.21
SCFD1-211ENST00000554437 DBHP09172 617 aa7.49□□□□□ -1.21
SCFD1-211ENST00000554437 C6orf222P0C671 652 aaPredicted RBP7.49□□□□□ -1.21
SCFD1-211ENST00000554437 GPR85P60893 370 aa7.49□□□□□ -1.21
SCFD1-211ENST00000554437 GABREP78334 506 aa7.49□□□□□ -1.21
SCFD1-211ENST00000554437 GIMAP6Q6P9H5 292 aa7.49□□□□□ -1.21
SCFD1-211ENST00000554437 MAMDC2Q7Z304 686 aaPredicted RBP7.49□□□□□ -1.21
SCFD1-211ENST00000554437 ZFYVE21Q9BQ24 234 aa7.49□□□□□ -1.21
SCFD1-211ENST00000554437 EPB41L4BQ9H329 900 aa7.49□□□□□ -1.21
SCFD1-211ENST00000554437 TMEM260Q9NX78 707 aa7.49□□□□□ -1.21
SCFD1-211ENST00000554437 CLDND1Q9NY35 253 aa7.49□□□□□ -1.21
SCFD1-211ENST00000554437 NDOR1Q9UHB4 597 aa7.49□□□□□ -1.21
SCFD1-211ENST00000554437 DBR1Q9UK59 544 aaKnown RBP7.49□□□□□ -1.21
SCFD1-211ENST00000554437 AQP7O14520 342 aa7.48□□□□□ -1.21
SCFD1-211ENST00000554437 SRGAP3O43295 1099 aa7.48□□□□□ -1.21
SCFD1-211ENST00000554437 NTRK1P04629 796 aa7.48□□□□□ -1.21
SCFD1-211ENST00000554437 CYBBP04839 570 aa7.48□□□□□ -1.21
SCFD1-211ENST00000554437 GLI4P10075 376 aa7.48□□□□□ -1.21
SCFD1-211ENST00000554437 TMEM62Q0P6H9 643 aa7.48□□□□□ -1.21
SCFD1-211ENST00000554437 NR1I3Q14994 352 aa7.48□□□□□ -1.21
SCFD1-211ENST00000554437 WWC2Q6AWC2 1192 aa7.48□□□□□ -1.21
SCFD1-211ENST00000554437 PAQR3Q6TCH7 311 aa7.48□□□□□ -1.21
SCFD1-211ENST00000554437 LBX2Q6XYB7 198 aa7.48□□□□□ -1.21
SCFD1-211ENST00000554437 NLRP10Q86W26 655 aa7.48□□□□□ -1.21
SCFD1-211ENST00000554437 HOMER1Q86YM7 354 aa7.48□□□□□ -1.21
SCFD1-211ENST00000554437 ZNF552Q9H707 407 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-211ENST00000554437 KCNK12Q9HB15 430 aa7.48□□□□□ -1.21
SCFD1-211ENST00000554437 ZC3H12DA2A288 527 aaKnown RBP7.47□□□□□ -1.21
SCFD1-211ENST00000554437 F8W031 263 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-211ENST00000554437 H7BY64 318 aa7.47□□□□□ -1.21
SCFD1-211ENST00000554437 RPTNQ6XPR3 784 aa7.47□□□□□ -1.21
SCFD1-211ENST00000554437 MTDHQ86UE4 582 aaKnown RBP7.47□□□□□ -1.21
SCFD1-211ENST00000554437 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.47□□□□□ -1.212e-17■■■■□ 19.6
SCFD1-211ENST00000554437 APPBP2Q92624 585 aa7.47□□□□□ -1.21
SCFD1-211ENST00000554437 RXFP1Q9HBX9 757 aa7.47□□□□□ -1.21
SCFD1-211ENST00000554437 NCOA5Q9HCD5 579 aaKnown RBP7.47□□□□□ -1.21
SCFD1-211ENST00000554437 FANCLQ9NW38 375 aa7.47□□□□□ -1.21
SCFD1-211ENST00000554437 KLHL14Q9P2G3 628 aa7.47□□□□□ -1.21
SCFD1-211ENST00000554437 COA3Q9Y2R0 106 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-211ENST00000554437 ABLIM1O14639 778 aa7.46□□□□□ -1.22
SCFD1-211ENST00000554437 ASMTLO95671 621 aa7.46□□□□□ -1.22
SCFD1-211ENST00000554437 YBX1P67809 324 aaKnown RBP7.46□□□□□ -1.22
SCFD1-211ENST00000554437 GUCY1A3Q02108 690 aa7.46□□□□□ -1.22
SCFD1-211ENST00000554437 CBX2Q14781 532 aaPredicted RBP7.46□□□□□ -1.22
SCFD1-211ENST00000554437 KIZQ2M2Z5 673 aa7.46□□□□□ -1.22
SCFD1-211ENST00000554437 MROH9Q5TGP6 573 aa7.46□□□□□ -1.22
SCFD1-211ENST00000554437 NETO2Q8NC67 525 aa7.46□□□□□ -1.22
SCFD1-211ENST00000554437 ALG1Q9BT22 464 aa7.46□□□□□ -1.22
SCFD1-211ENST00000554437 MRPL4Q9BYD3 311 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms